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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Lafrance-Vanasse, J."

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Search Summary

This query matches 20 Structures.

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Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

	Escherichia coli (8)
	Oryctolagus cuniculus (4)
	Leishmania mexicana (3)
	Saccharomyces cerevisiae S288C (3)
	Homo sapiens (1)
	Priestia megaterium (1)
	Streptomyces coelicolor A3(2) (1)

Taxonomy

	Bacteria (10)
	Eukaryota (10)

Experimental Method

	X-RAY DIFFRACTION (17)
	SOLUTION NMR (3)

Polymer Entity Type

Protein (20)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (13)
	2.0 - 2.5 (3)

Release Date

	2005 - 2009 (12)
	2010 - 2014 (3)
	2015 - 2019 (5)

Enzyme Classification Name

	Lyases (15)
	Hydrolases (1)
	Oxidoreductases (1)

Symmetry Type

	Asymmetric (13)
	Dihedral (7)

SCOP Classification

	Alpha and beta proteins (a/b) (7)
	Alpha and beta proteins (a+b) (9)
	All alpha proteins (8)
	All beta proteins (3)
	Artifacts (3)

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1 to 20 of 20 Structures

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1ZAH \| pdb_00001zah	Download File View File

Fructose-1,6-bisphosphate aldolase from rabbit muscle

St-Jean, M., Lafrance-Vanasse, J., Liotard, B., Sygusch, J.

(2005) J Biological Chem 280: 27262-27270

Released	2005-05-10
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Fructose-bisphosphate aldolase A (protein)

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1ZAI \| pdb_00001zai	Download File View File

Fructose-1,6-bisphosphate Schiff base intermediate in FBP aldolase from rabbit muscle

St-Jean, M., Lafrance-Vanasse, J., Liotard, B., Sygusch, J.

(2005) J Biological Chem 280: 27262-27270

Released	2005-05-10
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Fructose-bisphosphate aldolase A (protein)
Unique Ligands	2FP

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1ZAJ \| pdb_00001zaj	Download File View File

Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with mannitol-1,6-bisphosphate, a competitive inhibitor

St-Jean, M., Lafrance-Vanasse, J., Liotard, B., Sygusch, J.

(2005) J Biological Chem 280: 27262-27270

Released	2005-05-10
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Fructose-bisphosphate aldolase A (protein)
Unique Ligands	M2P

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1ZAL \| pdb_00001zal	Download File View File

Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with partially disordered tagatose-1,6-bisphosphate, a weak competitive inhibitor

St-Jean, M., Lafrance-Vanasse, J., Liotard, B., Sygusch, J.

(2005) J Biological Chem 280: 27262-27270

Released	2005-05-10
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Fructose-bisphosphate aldolase A (protein)
Unique Ligands	PO4

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2L2I \| pdb_00002l2i	Download File View File

NMR Structure of the complex between the Tfb1 subunit of TFIIH and the activation domain of EKLF

Mas, C., Di Lello, P., Lafrance-Vanasse, J., Omichinski, J.G.

To be published

Released	2011-07-06
Method	SOLUTION NMR
Organisms	Homo sapiens Saccharomyces cerevisiae S288C
Macromolecule	Krueppel-like factor 1 (protein) RNA polymerase II transcription factor B subunit 1 (protein)

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2LOX \| pdb_00002lox	Download File View File

NMR structure of the complex between the PH domain of the Tfb1 subunit from TFIIH and Rad2

Lafrance-Vanasse, J., Legault, P., Omichinski, J.

(2012) Nucleic Acids Res 40: 5739-5750

Released	2012-02-15
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	DNA repair protein RAD2 (protein) RNA polymerase II transcription factor B subunit 1 (protein)

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2M14 \| pdb_00002m14	Download File View File

NMR structure of the complex between the PH domain of the Tfb1 subunit from TFIIH and Rad4

Lafrance-Vanasse, J., Arseneault, G., Cappadocia, L., Legault, P., Omichinski, J.G.

(2013) Nucleic Acids Res 41: 2736-2745

Released	2013-01-23
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	DNA repair protein RAD4 (protein) RNA polymerase II transcription factor B subunit 1 (protein)

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2QAP \| pdb_00002qap	Download File View File

Fructose-1,6-bisphosphate aldolase from Leishmania mexicana

Lafrance-Vanasse, J., Sygusch, J.

(2007) Biochemistry 46: 9533-9540

Released	2007-08-21
Method	X-RAY DIFFRACTION 1.59 Å
Organisms	Leishmania mexicana
Macromolecule	Fructose-1,6-bisphosphate aldolase (protein)
Unique Ligands	PO4

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2QDG \| pdb_00002qdg	Download File View File

Fructose-1,6-bisphosphate Schiff base intermediate in FBP aldolase from Leishmania mexicana

Lafrance-Vanasse, J., Sygusch, J.

(2007) Biochemistry 46: 9533-9540

Released	2007-08-21
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Leishmania mexicana
Macromolecule	Fructose-1,6-bisphosphate aldolase (protein)
Unique Ligands	2FP, PO4

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2QDH \| pdb_00002qdh	Download File View File

Fructose-1,6-bisphosphate aldolase from Leishmania mexicana in complex with mannitol-1,6-bisphosphate, a competitive inhibitor

Lafrance-Vanasse, J., Sygusch, J.

(2007) Biochemistry 46: 9533-9540

Released	2007-08-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Leishmania mexicana
Macromolecule	Fructose-1,6-bisphosphate aldolase (protein)
Unique Ligands	M2P

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3F0O \| pdb_00003f0o	Download File View File

Crystal structure of MerB, the Organomercurial Lyase involved in a bacterial mercury resistance system

Lafrance-Vanasse, J., Lefebvre, M., Di Lello, P., Sygusch, J., Omichinski, J.G.

(2009) J Biological Chem 284: 938-944

Released	2008-11-11
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Escherichia coli
Macromolecule	Alkylmercury lyase (protein)
Unique Ligands	BR

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3F0P \| pdb_00003f0p	Download File View File

Crystal structure of the mercury-bound form of MerB, the Organomercurial Lyase involved in a bacterial mercury resistance system

Lafrance-Vanasse, J., Lefebvre, M., Di Lello, P., Sygusch, J., Omichinski, J.G.

(2009) J Biological Chem 284: 938-944

Released	2008-11-11
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Escherichia coli
Macromolecule	Alkylmercury lyase (protein)
Unique Ligands	BR, HG

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3F2F \| pdb_00003f2f	Download File View File

Crystal structure of the mercury-bound form of MerB, the Organomercurial Lyase involved in a bacterial mercury resistance system

Lafrance-Vanasse, J., Lefebvre, M., Di Lello, P., Sygusch, J., Omichinski, J.G.

(2009) J Biological Chem 284: 938-944

Released	2008-11-11
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Escherichia coli
Macromolecule	Alkylmercury lyase (protein)
Unique Ligands	BR, HG

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3F2G \| pdb_00003f2g	Download File View File

Crystal structure of MerB mutant C160S, the Organomercurial Lyase involved in a bacterial mercury resistance system

Lafrance-Vanasse, J., Lefebvre, M., Di Lello, P., Sygusch, J., Omichinski, J.G.

(2009) J Biological Chem 284: 938-944

Released	2008-11-11
Method	X-RAY DIFFRACTION 1.781 Å
Organisms	Escherichia coli
Macromolecule	Alkylmercury lyase (protein)

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3F2H \| pdb_00003f2h	Download File View File

Crystal structure of the mercury-bound form of MerB mutant C160S, the Organomercurial Lyase involved in a bacterial mercury resistance system

Lafrance-Vanasse, J., Lefebvre, M., Di Lello, P., Sygusch, J., Omichinski, J.G.

(2009) J Biological Chem 284: 938-944

Released	2008-11-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	Alkylmercury lyase (protein)
Unique Ligands	HG

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5C0T \| pdb_00005c0t	Download File View File

Crystal structure of the mercury-bound form of MerB mutant D99S

Wahba, H.M., Lecoq, L., Stevenson, M., Mansour, A., Cappadocia, L., Lafrance-Vanasse, J., Wilkinson, K.J., Sygusch, J., Wilcox, D.E., Omichinski, J.G.

(2016) Biochemistry 55: 1070-1081

Released	2016-02-03
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Escherichia coli
Macromolecule	Alkylmercury lyase (protein)
Unique Ligands	BR, HG

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5C0U \| pdb_00005c0u	Download File View File

Crystal structure of the copper-bound form of MerB mutant D99S

Wahba, H.M., Lecoq, L., Stevenson, M., Mansour, A., Cappadocia, L., Lafrance-Vanasse, J., Wilkinson, K.J., Sygusch, J., Wilcox, D.E., Omichinski, J.G.

(2016) Biochemistry 55: 1070-1081

Released	2016-02-03
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Escherichia coli
Macromolecule	Alkylmercury lyase (protein)
Unique Ligands	BR, CU

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5C17 \| pdb_00005c17	Download File View File

Crystal structure of the mercury-bound form of MerB2

Wahba, H.M., Lecoq, L., Stevenson, M., Mansour, A., Cappadocia, L., Lafrance-Vanasse, J., Wilkinson, K.J., Sygusch, J., Wilcox, D.E., Omichinski, J.G.

(2016) Biochemistry 55: 1070-1081

Released	2016-02-03
Method	X-RAY DIFFRACTION 1.24 Å
Organisms	Priestia megaterium
Macromolecule	MerB2 (protein)
Unique Ligands	DTV, GOL, HG

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5DSF \| pdb_00005dsf	Download File View File

Crystal structure of the mercury-bound form of MerB mutant D99S

Wahba, H.M., Lecoq, L., Stevenson, M., Mansour, A., Cappadocia, L., Lafrance-Vanasse, J., Wilkinson, K.J., Sygusch, J., Wilcox, D.E., Omichinski, J.G.

(2016) Biochemistry 55: 1070-1081

Released	2016-02-03
Method	X-RAY DIFFRACTION 1.954 Å
Organisms	Escherichia coli
Macromolecule	Alkylmercury lyase (protein)
Unique Ligands	BR, HG

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6MUJ \| pdb_00006muj	Download File View File

Formylglycine generating enzyme bound to copper

Lafrance-Vanasse, J., Appel, M.J., Tsai, C.-L., Bertozzi, C., Tainer, J.A.

(2019) Proc Natl Acad Sci U S A 116: 5370-5375

Released	2019-02-27
Method	X-RAY DIFFRACTION 2.249 Å
Organisms	Streptomyces coelicolor A3(2)
Macromolecule	Formylglycine-generating enzyme (protein)
Unique Ligands	CA, CU, DTT, FMT, GLY, GOL, IMD

1 to 20 of 20 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1ZAH | pdb_00001zah

Fructose-1,6-bisphosphate aldolase from rabbit muscle

1ZAI | pdb_00001zai

Fructose-1,6-bisphosphate Schiff base intermediate in FBP aldolase from rabbit muscle

1ZAJ | pdb_00001zaj

Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with mannitol-1,6-bisphosphate, a competitive inhibitor

1ZAL | pdb_00001zal

Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with partially disordered tagatose-1,6-bisphosphate, a weak competitive inhibitor

2L2I | pdb_00002l2i

NMR Structure of the complex between the Tfb1 subunit of TFIIH and the activation domain of EKLF

2LOX | pdb_00002lox

NMR structure of the complex between the PH domain of the Tfb1 subunit from TFIIH and Rad2

2M14 | pdb_00002m14

NMR structure of the complex between the PH domain of the Tfb1 subunit from TFIIH and Rad4

2QAP | pdb_00002qap

Fructose-1,6-bisphosphate aldolase from Leishmania mexicana

2QDG | pdb_00002qdg

Fructose-1,6-bisphosphate Schiff base intermediate in FBP aldolase from Leishmania mexicana

2QDH | pdb_00002qdh

Fructose-1,6-bisphosphate aldolase from Leishmania mexicana in complex with mannitol-1,6-bisphosphate, a competitive inhibitor

3F0O | pdb_00003f0o

Crystal structure of MerB, the Organomercurial Lyase involved in a bacterial mercury resistance system

3F0P | pdb_00003f0p

Crystal structure of the mercury-bound form of MerB, the Organomercurial Lyase involved in a bacterial mercury resistance system

3F2F | pdb_00003f2f

Crystal structure of the mercury-bound form of MerB, the Organomercurial Lyase involved in a bacterial mercury resistance system

3F2G | pdb_00003f2g

Crystal structure of MerB mutant C160S, the Organomercurial Lyase involved in a bacterial mercury resistance system

3F2H | pdb_00003f2h

Crystal structure of the mercury-bound form of MerB mutant C160S, the Organomercurial Lyase involved in a bacterial mercury resistance system

5C0T | pdb_00005c0t

Crystal structure of the mercury-bound form of MerB mutant D99S

5C0U | pdb_00005c0u

Crystal structure of the copper-bound form of MerB mutant D99S

5C17 | pdb_00005c17

Crystal structure of the mercury-bound form of MerB2

5DSF | pdb_00005dsf

Crystal structure of the mercury-bound form of MerB mutant D99S

6MUJ | pdb_00006muj

Formylglycine generating enzyme bound to copper

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1ZAH | pdb_00001zah

1ZAI | pdb_00001zai

1ZAJ | pdb_00001zaj

1ZAL | pdb_00001zal

2L2I | pdb_00002l2i

2LOX | pdb_00002lox

2M14 | pdb_00002m14

2QAP | pdb_00002qap

2QDG | pdb_00002qdg

2QDH | pdb_00002qdh

3F0O | pdb_00003f0o

3F0P | pdb_00003f0p

3F2F | pdb_00003f2f

3F2G | pdb_00003f2g

3F2H | pdb_00003f2h

5C0T | pdb_00005c0t

5C0U | pdb_00005c0u

5C17 | pdb_00005c17

5DSF | pdb_00005dsf

6MUJ | pdb_00006muj