Download MendeleyRecognition of the H3K4me3 mark by the TAF3-PHD finger
van Ingen, H., van Schaik, F.M.A., Wienk, H., Ballering, J., Deschesne, A., Kruijzer, J., Timmers, H., Boelens, R.To be published.
2K17 | pdb_00002k17
Solution structure of the TAF3 PHD domain in complex with a H3K4me3 peptide
- PDB DOI: https://doi.org/10.2210/pdb2K17/pdb
- BMRB: 15671
- Classification: TRANSCRIPTION
- Organism(s): Mus musculus
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2008-02-22 Released: 2008-07-15
Experimental Data Snapshot
- Method: SOLUTION NMR
- Conformers Calculated: 100
- Conformers Submitted: 20
- Selection Criteria: structures with the lowest energy
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| H3K4me3 peptide | A [auth P] | 13 | N/A | Mutation(s): 0 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Transcription initiation factor TFIID subunit 3 | B [auth A] | 75 | Mus musculus | Mutation(s): 0 Gene Names: Taf3 |  |
UniProt | |||||
Find proteins for Q5HZG4 (Mus musculus) Explore Q5HZG4 Go to UniProtKB: Q5HZG4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5HZG4 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ZN Query on ZN | C [auth A], D [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| M3L Query on M3L | A [auth P] | L-PEPTIDE LINKING | C9 H21 N2 O2 |  | LYS |
Experimental Data & Validation
Experimental Data
- Method: SOLUTION NMR
- Conformers Calculated: 100
- Conformers Submitted: 20
- Selection Criteria: structures with the lowest energy
Entry History
Deposition Data
- Released Date: 2008-07-15 Deposition Author(s): van Ingen, H., van Schaik, F.M.A., Wienk, H., Timmers, M., Boelens, R.
Revision History (Full details and data files)
- Version 1.0: 2008-07-15
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2020-02-19
Changes: Data collection, Database references, Derived calculations, Other - Version 1.3: 2023-06-14
Changes: Database references, Derived calculations, Other
