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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "L1"

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Search Summary

This query matches 52 Structures.

Refinements

Structure Determination Methodology

experimental (52)

Scientific Name of Source Organism

	Stenotrophomonas maltophilia (12)
	human papillomavirus 58 (8)
	Mus musculus (7)
	Human papillomavirus 16 (6)
	Homo sapiens (4)
	Human papillomavirus type 6 (3)
	Mammalian orthoreovirus 3 Dearing (3)
	human papillomavirus 18 (3)
	human papillomavirus 59 (3)
	Reovirus sp. (2)

More...

Taxonomy

	Monodnaviria (30)
	Eukaryota (14)
	Bacteria (13)
	Riboviria (5)
	Varidnaviria (2)

Experimental Method

	X-RAY DIFFRACTION (37)
	ELECTRON MICROSCOPY (15)

Polymer Entity Type

	Protein (52)
	RNA (3)

Refinement Resolution (Å)

	1.5 - 2.0 (13)
	2.0 - 2.5 (4)
	2.5 - 3.0 (11)
	3.0 - 3.5 (10)
	3.5 - 4.0 (4)
	4.0 - 4.5 (7)
	> 4.5 (3)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (5)
	2005 - 2009 (15)
	2015 - 2019 (18)
	2020 - 2024 (9)
	2025 - 2029 (4)

Enzyme Classification Name

	Hydrolases (13)
	Transferases (5)

Symmetry Type

	Cyclic (22)
	Asymmetric (25)
	Icosahedral (6)
	Dihedral (4)

SCOP Classification

	All beta proteins (7)
	Alpha and beta proteins (a+b) (12)
	Artifacts (1)
	Multi-domain proteins (alpha and beta) (5)

AllSelected

1 to 25 of 52 Structures

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1MUK \| pdb_00001muk	Download File View File

reovirus lambda3 native structure

Tao, Y., Farsetta, D.L., Nibert, M.L., Harrison, S.C.

(2002) Cell 111: 733-745

Released	2002-12-18
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Reovirus sp.
Macromolecule	MINOR CORE PROTEIN LAMBDA 3 (protein)

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1MWH \| pdb_00001mwh	Download File View File

REOVIRUS POLYMERASE LAMBDA3 BOUND TO MRNA CAP ANALOG

Tao, Y., Farsetta, D.L., Nibert, M.L., Harrison, S.C.

(2002) Cell 111: 733-745

Released	2002-12-18
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Reovirus sp.
Macromolecule	MINOR CORE PROTEIN LAMBDA 3 (protein)
Unique Ligands	GTG, MN

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1N1H \| pdb_00001n1h	Download File View File

Initiation complex of polymerase lambda3 from reovirus

Tao, Y., Farsetta, D.L., Nibert, M.L., Harrison, S.C.

(2002) Cell 111: 733-745

Released	2002-12-25
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mammalian orthoreovirus 3 Dearing
Macromolecule	Minor core protein lambda 3 (protein) 5'-R(APUPUPAPGPC)-3' (nucleic acid)
Unique Ligands	CH1, G7M, GDP, GH3, MN

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1N35 \| pdb_00001n35	Download File View File

lambda3 elongation complex with four phosphodiester bond formed

Tao, Y., Farsetta, D.L., Nibert, M.L., Harrison, S.C.

(2002) Cell 111: 733-745

Released	2002-12-25
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mammalian orthoreovirus 3 Dearing
Macromolecule	Minor core protein lambda 3 (protein) 5'-R(APUPUPAPGPCPCPCPCPC)-3' (nucleic acid) 5'-R(PGPGPGPGP*G)-3' (nucleic acid)
Unique Ligands	CH1, MN

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1N38 \| pdb_00001n38	Download File View File

reovirus polymerase lambda3 elongation complex with one phosphodiester bond formed

Tao, Y., Farsetta, D.L., Nibert, M.L., Harrison, S.C.

(2002) Cell 111: 733-745

Released	2002-12-25
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mammalian orthoreovirus 3 Dearing
Macromolecule	Minor core protein lambda 3 (protein) 5'-R(APUPUPAPGPC)-3' (nucleic acid) 5'-R(PGPC)-3' (nucleic acid)
Unique Ligands	CH1, MN, U3H

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1SML \| pdb_00001sml	Download File View File

METALLO BETA LACTAMASE L1 FROM STENOTROPHOMONAS MALTOPHILIA

Ullah, J.H., Walsh, T.R., Taylor, I.A., Emery, D.C., Verma, C.S., Gamblin, S.J., Spencer, J.

(1998) J Mol Biology 284: 125-136

Released	1999-09-20
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	PROTEIN (PENICILLINASE) (protein)
Unique Ligands	ZN

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1YPY \| pdb_00001ypy	Download File View File

Crystal Structure of Vaccinia Virus L1 protein

Su, H.P., Garman, S.C., Allison, T.J., Fogg, C., Moss, B., Garboczi, D.N.

(2005) Proc Natl Acad Sci U S A 102: 4240-4245

Released	2005-03-01
Method	X-RAY DIFFRACTION 1.51 Å
Organisms	Vaccinia virus
Macromolecule	Virion membrane protein (protein)

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2FM6 \| pdb_00002fm6	Download File View File

Zinc-beta-lactamase L1 from stenotrophomonas maltophilia (native form)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biology 375: 257-269

Released	2007-01-16
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	GOL, SO4, ZN

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2FU6 \| pdb_00002fu6	Download File View File

Zinc-beta-lactamase l1 from stenotrophomonas maltophilia (apo form)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

To be published

Released	2007-01-30
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	GOL, SO4

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2FU7 \| pdb_00002fu7	Download File View File

Zinc-beta-lactamase L1 from stenotrophomonas maltophilia (Cu-substituted form)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biology 375: 257-269

Released	2007-01-30
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	CU, GOL, PHN, SO4

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2FU8 \| pdb_00002fu8	Download File View File

Zinc-beta-lactamase L1 from stenotrophomonas maltophilia (d-captopril complex)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biology 375: 257-269

Released	2007-01-30
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	GOL, MCO, SO4, ZN

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2FU9 \| pdb_00002fu9	Download File View File

Zinc-beta-lactamase L1 from stenotrophomonas maltophilia (mp2 inhibitor complex)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biology 375: 257-269

Released	2007-01-30
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	GOL, MP2, SO4, ZN

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2GFJ \| pdb_00002gfj	Download File View File

Crystal structure of the zinc-beta-lactamase L1 from stenotrophomonas maltophilia (inhibitor 1)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biology 375: 257-269

Released	2007-03-27
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	SO4, VI, ZN

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2GFK \| pdb_00002gfk	Download File View File

Crystal structure of the zinc-beta-lactamase l1 from stenotrophomonas maltophilia (inhibitor 2)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biology 375: 257-269

Released	2007-03-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	PEG, SO4, VII, ZN

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2HB9 \| pdb_00002hb9	Download File View File

Crystal Structure of the Zinc-Beta-Lactamase L1 from Stenotrophomonas Maltophilia (Inhibitor 3)

Nauton, L., Garau, G., Kahn, R., Dideberg, O.

(2008) J Mol Biology 375: 257-269

Released	2007-05-29
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	L13, SO4, ZN

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2QDT \| pdb_00002qdt	Download File View File

Structural Basis for the Broad-Spectrum Inhibition of Metallo-{Beta}-Lactamases: L1- IS38 Complex

Garau, G., Dideberg, O.

(2008) Org Biomol Chem 6: 2282-2294

Released	2007-08-28
Method	X-RAY DIFFRACTION 2 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	I38, SO4, ZN

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2QIN \| pdb_00002qin	Download File View File

Stenotrophomonas maltophilia L1 Metallo-beta-Lactamase Asp-120 Cys mutant

Spencer, J.

(2007) Biochemistry 46: 10664-10674

Released	2007-08-14
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	MG, ZN

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2QJS \| pdb_00002qjs	Download File View File

Stenotrophomonas maltophilia L1 metallo-beta-lactamase Asp-120 Asn mutant

Crisp, J., Conners, R., Spencer, J.

(2007) Biochemistry 46: 10664-10674

Released	2007-08-21
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	ZN

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2R5I \| pdb_00002r5i	Download File View File

Pentamer Structure of Major Capsid Protein L1 of Human Papilloma Virus type 18

Bishop, B., Dasgupta, J., Chen, X.S.

(2007) J Biological Chem 282: 31803-31811

Released	2008-05-06
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	human papillomavirus 18
Macromolecule	L1 protein (protein)

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2R5J \| pdb_00002r5j	Download File View File

Pentamer Structure of Major Capsid protein L1 of Human Papilloma Virus Type 35

Bishop, B., Dasgupta, J., Chen, X.S.

(2007) J Biological Chem 282: 31803-31811

Released	2008-05-06
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	human papillomavirus 35
Macromolecule	Major capsid protein L1 (protein)

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2R5K \| pdb_00002r5k	Download File View File

Pentamer Structure of Major Capsid protein L1 of Human Papilloma Virus type 11

Bishop, B., Dasgupta, J., Chen, X.S.

(2007) J Biological Chem 282: 31803-31811

Released	2008-05-06
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	human papillomavirus 11
Macromolecule	Major capsid protein L1 (protein)

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3JBA \| pdb_00003jba	Download File View File

The U4 antibody epitope on human papillomavirus 16 identified by cryo-EM

Guan, J., Bywaters, S.M., Brendle, S.A., Lee, H., Ashley, R.E., Christensen, N.D., Hafenstein, S.

(2015) J Virol 89: 12108-12117

Released	2015-10-07
Method	ELECTRON MICROSCOPY 12 Å
Organisms	Human papillomavirus 16 Mus musculus
Macromolecule	H16.U4 antibody heavy chain (protein) H16.U4 antibody light chain (protein) Major capsid protein L1 (protein)