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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Spraggon, G."

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Search Summary

This query matches 169 Structures.

Refinements

Structure Determination Methodology

experimental (169)

Scientific Name of Source Organism

	Homo sapiens (60)
	Thermotoga maritima (32)
	synthetic construct (11)
	Thermotoga maritima MSB8 (8)
	Mus musculus (5)
	Methanocaldococcus jannaschii (4)
	Mycobacterium tuberculosis (4)
	Streptococcus pneumoniae TIGR4 (4)
	Neisseria meningitidis (3)
	Pseudomonas aeruginosa (3)

More...

Taxonomy

	Bacteria (84)
	Eukaryota (73)
	other sequences (11)
	Archaea (5)
	Eukaryota (eukaryotes) (2)
	Duplodnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (167)
	ELECTRON MICROSCOPY (2)

Polymer Entity Type

	Protein (162)
	RNA (7)
	DNA (2)

Refinement Resolution (Å)

	1.0 - 1.5 (7)
	1.5 - 2.0 (73)
	2.0 - 2.5 (50)
	2.5 - 3.0 (29)
	3.0 - 3.5 (6)
	3.5 - 4.0 (1)
	> 4.5 (3)

Release Date

	1995 - 1999 (12)
	2000 - 2004 (60)
	2005 - 2009 (45)
	2010 - 2014 (24)
	2015 - 2019 (12)
	2020 - 2024 (16)

Enzyme Classification Name

	Hydrolases (38)
	Transferases (32)
	Oxidoreductases (10)
	Lyases (7)
	Ligases (7)
	Isomerases (5)

Symmetry Type

	Asymmetric (102)
	Cyclic (63)
	Dihedral (16)
	Helical (1)

SCOP Classification

	Alpha and beta proteins (a+b) (62)
	Coiled coil proteins (10)
	Artifacts (39)
	All beta proteins (30)
	Alpha and beta proteins (a/b) (30)
	All alpha proteins (11)
	Small proteins (7)
	Low resolution protein structures (1)
	Multi-domain proteins (alpha and beta) (4)
	Membrane and cell surface proteins and peptides (2)

AllSelected

1 to 25 of 169 Structures

Page 1 of 7

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1B8K \| pdb_00001b8k	Download File View File

Neurotrophin-3 from Human

Robinson, R.C., Radziejewski, C., Stuart, D.I., Jones, E.Y., Choe, S.

(1999) Protein Sci 8: 2589-2597

Released	1999-02-09
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (NEUROTROPHIN-3) (protein)

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1B8M \| pdb_00001b8m	Download File View File

BRAIN DERIVED NEUROTROPHIC FACTOR, NEUROTROPHIN-4

Robinson, R.C., Radziejewski, C., Stuart, D.I., Jones, E.Y., Choe, S.

(1999) Protein Sci 8: 2589-2597

Released	1999-02-09
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (BRAIN DERIVED NEUROTROPHIC FACTOR) (protein) PROTEIN (NEUROTROPHIN-4) (protein)

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1B98 \| pdb_00001b98	Download File View File

NEUROTROPHIN 4 (HOMODIMER)

Robinson, R.C., Radziejewski, C., Stuart, D.I., Jones, E.Y., Choe, S.

(1999) Protein Sci 8: 2589-2597

Released	1999-02-26
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (NEUROTROPHIN-4) (protein)
Unique Ligands	CL

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1EI3 \| pdb_00001ei3	Download File View File

CRYSTAL STRUCTURE OF NATIVE CHICKEN FIBRINOGEN

Yang, Z., Mochalkin, I., Veerapandian, L., Riley, M., Doolittle, R.F.

(2000) Proc Natl Acad Sci U S A 97: 3907-3912

Released	2000-05-10
Method	X-RAY DIFFRACTION 5.5 Å
Organisms	Gallus gallus
Macromolecule	FIBRINOGEN (protein)

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1FZA \| pdb_00001fza	Download File View File

CRYSTAL STRUCTURE OF FIBRINOGEN FRAGMENT D

Spraggon, G., Everse, S.J., Doolittle, R.F.

(1997) Nature 389: 455-462

Released	1997-12-03
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	FIBRINOGEN (protein)
Unique Ligands	CA, NAG

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1FZB \| pdb_00001fzb	Download File View File

CRYSTAL STRUCTURE OF CROSSLINKED FRAGMENT D

Spraggon, G., Everse, S.J., Doolittle, R.F.

(1997) Nature 389: 455-462

Released	1997-12-03
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	FIBRINOGEN (protein) PEPTIDE LIGAND GPRG (protein)
Unique Ligands	CA, NAG

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1FZC \| pdb_00001fzc	Download File View File

CRYSTAL STRUCTURE OF FRAGMENT DOUBLE-D FROM HUMAN FIBRIN WITH TWO DIFFERENT BOUND LIGANDS

Everse, S.J., Spraggon, G., Veerapandian, L., Riley, M., Doolittle, R.F.

(1998) Biochemistry 37: 8637-8642

Released	1998-10-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	FIBRIN (protein)
Unique Ligands	CA, MAN, NAG
Unique branched monosaccharides	NAG

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1FZD \| pdb_00001fzd	Download File View File

STRUCTURE OF RECOMBINANT ALPHAEC DOMAIN FROM HUMAN FIBRINOGEN-420

Spraggon, G., Applegate, D., Everse, S.J., Zhang, J.-Z., Veerapandian, L., Redman, C., Doolittle, R.F., Grieninger, G.

(1998) Proc Natl Acad Sci U S A 95: 9099-9104

Released	1998-08-19
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	FIBRINOGEN-420 (protein)
Unique Ligands	CA, NAG
Unique branched monosaccharides	MAN, NAG, NDG

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1FZE \| pdb_00001fze	Download File View File

CRYSTAL STRUCTURE OF FRAGMENT DOUBLE-D FROM HUMAN FIBRIN

Everse, S.J., Spraggon, G., Veerapandian, L., Doolittle, R.F.

(1999) Biochemistry 38: 2941-2946

Released	1999-06-08
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	FIBRINOGEN (protein)
Unique Ligands	CA, NAG

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1FZF \| pdb_00001fzf	Download File View File

CRYSTAL STRUCTURE OF FRAGMENT DOUBLE-D FROM HUMAN FIBRIN WITH THE PEPTIDE LIGAND GLY-HIS-ARG-PRO-AMIDE

Everse, S.J., Spraggon, G., Veerapandian, L., Doolittle, R.F.

(1999) Biochemistry 38: 2941-2946

Released	1999-06-08
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	FIBRINOGEN (protein)
Unique Ligands	CA, NAG

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1FZG \| pdb_00001fzg	Download File View File

CRYSTAL STRUCTURE OF FRAGMENT D FROM HUMAN FIBRINOGEN WITH THE PEPTIDE LIGAND GLY-HIS-ARG-PRO-AMIDE

Everse, S.J., Spraggon, G., Veerapandian, L., Doolittle, R.F.

(1999) Biochemistry 38: 2941-2946

Released	1999-06-08
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	FIBRINOGEN (protein)
Unique Ligands	CA
Unique branched monosaccharides	NAG

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1HCF \| pdb_00001hcf	Download File View File

Crystal structure of TrkB-d5 bound to neurotrophin-4/5

Banfield, M.J., Naylor, R.L., Robertson, A.G.S., Allen, S.J., Dawbarn, D., Brady, R.L.

(2001) Structure 9: 1191

Released	2001-12-06
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	BDNF/NT-3 GROWTH FACTORS RECEPTOR (protein) NEUROTROPHIN-4 (protein)
Unique Ligands	SO4

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1I7Q \| pdb_00001i7q	Download File View File

ANTHRANILATE SYNTHASE FROM S. MARCESCENS

Spraggon, G., Kim, C., Nguyen-Huu, X., Yee, M.-C., Yanofsky, C., Mills, S.E.

(2001) Proc Natl Acad Sci U S A 98: 6021-6026

Released	2001-05-16
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Serratia marcescens
Macromolecule	ANTHRANILATE SYNTHASE (protein) TRPG (protein)
Unique Ligands	BEZ, GLU, MG, PYR

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1I7S \| pdb_00001i7s	Download File View File

ANTHRANILATE SYNTHASE FROM SERRATIA MARCESCENS IN COMPLEX WITH ITS END PRODUCT INHIBITOR L-TRYPTOPHAN

Spraggon, G., Kim, C., Nguyen-Huu, X., Yee, M.-C., Yanofsky, C., Mills, S.E.

(2001) Proc Natl Acad Sci U S A 98: 6021-6026

Released	2001-05-16
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Serratia marcescens
Macromolecule	ANTHRANILATE SYNTHASE (protein) TRPG (protein)
Unique Ligands	TRP

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1J5S \| pdb_00001j5s	Download File View File

Crystal structure of uronate isomerase (TM0064) from Thermotoga maritima at 2.85 A resolution

Joint Center for Structural Genomics (JCSG)

(2003) Proteins 53: 142-145

Released	2002-07-17
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Thermotoga maritima
Macromolecule	URONATE ISOMERASE (protein)

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1J5Y \| pdb_00001j5y	Download File View File

Crystal structure of transcriptional regulator (TM1602) from Thermotoga maritima at 2.3 A resolution

Joint Center for Structural Genomics (JCSG)

(2007) Proteins 67: 247-252

Released	2002-07-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thermotoga maritima
Macromolecule	TRANSCRIPTIONAL REGULATOR, BIOTIN REPRESSOR FAMILY (protein)
Unique Ligands	K, NI

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1J6U \| pdb_00001j6u	Download File View File

Crystal structure of UDP-N-acetylmuramate-alanine ligase MurC (TM0231) from Thermotoga maritima at 2.3 A resolution

Joint Center for Structural Genomics (JCSG)

(2004) Proteins 55: 1078-1081

Released	2002-11-06
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thermotoga maritima
Macromolecule	UDP-N-acetylmuramate-alanine ligase MurC (protein)

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1J7J \| pdb_00001j7j	Download File View File

Crystal Structure of the HPRT from Salmonella typhimurium

Lee, C.C., Focia, P.J., Spraggon, G., Eakin, A.E.

To be published

Released	2003-07-29
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	hypoxanthine phosphoribosyltransferase (protein)
Unique Ligands	MG

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1JES \| pdb_00001jes	Download File View File

Crystal Structure of a Copper-Mediated Base Pair in DNA

Atwell, S., Meggers, E., Spraggon, G., Schultz, P.G.

(2001) J Am Chem Soc 123: 12364-12367

Released	2001-11-23
Method	X-RAY DIFFRACTION 1.5 Å
Macromolecule	5'-D(CPGPCPGP(DPY)PAPTP(DRP)PCPGPCPG)-3' (nucleic acid)
Unique Ligands	CU

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1KEX \| pdb_00001kex	Download File View File

Crystal Structure of the b1 Domain of Human Neuropilin-1

Lee, C.C., Kreusch, A., McMullan, D., Ng, K., Spraggon, G.

(2003) Structure 11: 99-108

Released	2003-01-28
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Neuropilin-1 (protein)

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1KGZ \| pdb_00001kgz	Download File View File

Crystal Structure Analysis of the Anthranilate Phosphoribosyltransferase from Erwinia carotovora (current name, Pectobacterium carotovorum)

Kim, C., Xuong, N.-H., Edwards, S., Madhusudan, Yee, M.-C., Spraggon, G., Mills, S.E.

(2002) FEBS Lett 523: 239-246

Released	2002-10-23
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Pectobacterium carotovorum
Macromolecule	Anthranilate phosphoribosyltransferase (protein)
Unique Ligands	HG, MN, PRP