4LMX
Light harvesting complex PE555 from the cryptophyte Hemiselmis andersenii CCMP644
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2 Family | Phycocyanin-like phycobilisome proteins | 8064821 | 4000579 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Globin-like | 8064822 | 3000554 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | Globin-like | 8064822 | 3000554 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Globin-like | 8064822 | 3000554 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Globin-like | 8064822 | 3000554 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Globin-like | 8064822 | 3000554 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Globin-like | 8064822 | 3000554 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Phycobilisome | e4lmxB1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Phycobilisome | ECOD (1.6) |
D | Phycobilisome | e4lmxD1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Phycobilisome | ECOD (1.6) |
F | Phycobilisome | e4lmxF1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Phycobilisome | ECOD (1.6) |
H | Phycobilisome | e4lmxH1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Phycobilisome | ECOD (1.6) |
J | Phycobilisome | e4lmxJ1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Phycobilisome | ECOD (1.6) |
L | Phycobilisome | e4lmxL1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Phycobilisome | ECOD (1.6) |
A | Phycoerythr_ab | e4lmxA1 | A: extended segments | X: Phycoerythrin 545 alpha-subunits (From Topology) | H: Phycoerythrin 545 alpha-subunits (From Topology) | T: Phycoerythrin 545 alpha-subunits | F: Phycoerythr_ab | ECOD (1.6) |
C | Phycoerythr_ab | e4lmxC1 | A: extended segments | X: Phycoerythrin 545 alpha-subunits (From Topology) | H: Phycoerythrin 545 alpha-subunits (From Topology) | T: Phycoerythrin 545 alpha-subunits | F: Phycoerythr_ab | ECOD (1.6) |
E | Phycoerythr_ab | e4lmxE1 | A: extended segments | X: Phycoerythrin 545 alpha-subunits (From Topology) | H: Phycoerythrin 545 alpha-subunits (From Topology) | T: Phycoerythrin 545 alpha-subunits | F: Phycoerythr_ab | ECOD (1.6) |
G | Phycoerythr_ab | e4lmxG1 | A: extended segments | X: Phycoerythrin 545 alpha-subunits (From Topology) | H: Phycoerythrin 545 alpha-subunits (From Topology) | T: Phycoerythrin 545 alpha-subunits | F: Phycoerythr_ab | ECOD (1.6) |
I | Phycoerythr_ab | e4lmxI1 | A: extended segments | X: Phycoerythrin 545 alpha-subunits (From Topology) | H: Phycoerythrin 545 alpha-subunits (From Topology) | T: Phycoerythrin 545 alpha-subunits | F: Phycoerythr_ab | ECOD (1.6) |
K | Phycoerythr_ab | e4lmxK1 | A: extended segments | X: Phycoerythrin 545 alpha-subunits (From Topology) | H: Phycoerythrin 545 alpha-subunits (From Topology) | T: Phycoerythrin 545 alpha-subunits | F: Phycoerythr_ab | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00502 | Phycobilisome protein (Phycobilisome) | Phycobilisome protein | - | Domain | |
PF02972 | Phycoerythrin, alpha/beta chain (Phycoerythr_ab) | Phycoerythrin, alpha/beta chain | - | Family | |
PF02972 | Phycoerythrin, alpha/beta chain (Phycoerythr_ab) | Phycoerythrin, alpha/beta chain | - | Family | |
PF02972 | Phycoerythrin, alpha/beta chain (Phycoerythr_ab) | Phycoerythrin, alpha/beta chain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038719 | Phycobilisome, alpha/beta subunit superfamily | Homologous Superfamily | |
IPR009050 | Globin-like superfamily | Homologous Superfamily | |
IPR012128 | Phycobilisome, alpha/beta subunit | Family | |
IPR004228 | Phycoerythrin alpha chain | Domain | |
IPR037011 | Phycoerythrin-like alpha chain superfamily | Homologous Superfamily | |
IPR011070 | Globular protein, non-globular alpha/beta subunit | Homologous Superfamily | |
IPR004228 | Phycoerythrin alpha chain | Domain | |
IPR037011 | Phycoerythrin-like alpha chain superfamily | Homologous Superfamily | |
IPR011070 | Globular protein, non-globular alpha/beta subunit | Homologous Superfamily | |
IPR004228 | Phycoerythrin alpha chain | Domain | |
IPR037011 | Phycoerythrin-like alpha chain superfamily | Homologous Superfamily | |
IPR011070 | Globular protein, non-globular alpha/beta subunit | Homologous Superfamily |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
LYZ | Parent Component: LYS :  AA0028 :  5-hydroxy-L-lysine MOD:00037 | |
LYZ | Parent Component: LYS :  AA0028 , AA0028 :  5-hydroxy-L-lysine MOD:00037 , 5-hydroxy-L-lysine MOD:00037 | |
LYZ | Parent Component: LYS :  AA0028 , AA0028 , AA0028 :  5-hydroxy-L-lysine MOD:00037 , 5-hydroxy-L-lysine MOD:00037 , 5-hydroxy-L-lysine MOD:00037 |