Download MendeleyCrystal structure of an uncharacterized protein (hypothetical protein MM_3218) from Methanosarcina mazei.
Eswaramoorthy, S., Almo, S.C., Swaminathan, S.To be published.
3R6A | pdb_00003r6a
Crystal structure of an uncharacterized protein (hypothetical protein MM_3218) from Methanosarcina mazei.
- PDB DOI: https://doi.org/10.2210/pdb3R6A/pdb
- Classification: isomerase, lyase
- Organism(s): Methanosarcina mazei Go1
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2011-03-21 Released: 2011-04-06
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.76 Å
- R-Value Free: 0.234 (Depositor), 0.228 (DCC)
- R-Value Work: 0.218 (Depositor), 0.213 (DCC)
- R-Value Observed: 0.218 (Depositor)
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Uncharacterized protein | 144 | Methanosarcina mazei Go1 | Mutation(s): 0 Gene Names: Glo_EDI_BRP_like, MM_3218 EC: 4.4.1.5 |  | |
UniProt | |||||
Find proteins for Q8PS64 (Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)) Explore Q8PS64 Go to UniProtKB: Q8PS64 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8PS64 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ACT Query on ACT | C [auth B] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.76 Å
- R-Value Free: 0.234 (Depositor), 0.228 (DCC)
- R-Value Work: 0.218 (Depositor), 0.213 (DCC)
- R-Value Observed: 0.218 (Depositor)
Space Group: P 61
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 62.433 | α = 90 |
| b = 62.433 | β = 90 |
| c = 149.595 | γ = 120 |
| Software Name | Purpose |
|---|---|
| CBASS | data collection |
| SHELX | model building |
| SHARP | phasing |
| CNS | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| SHELX | phasing |
Entry History
Deposition Data
- Released Date: 2011-04-06 Deposition Author(s): Eswaramoorthy, S., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)
Revision History (Full details and data files)
- Version 1.0: 2011-04-06
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2024-11-06
Changes: Data collection, Database references, Derived calculations, Structure summary
