Download MendeleyStructure of three phase partition treated lipase from Thermomyces lanuginosa at 2.55A resolution
Shukla, P.K., Sinha, M., Mukherjee, J., Gupta, M.N., Kaur, P., Sharma, S., Singh, T.P.To be published.
4GWL
Structure of three phase partition treated lipase from Thermomyces lanuginosa at 2.55A resolution
- PDB DOI: https://doi.org/10.2210/pdb4GWL/pdb
- Classification: HYDROLASE
- Organism(s): Thermomyces lanuginosus
- Mutation(s): No
- Deposited: 2012-09-03 Released: 2012-09-19
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.55 Å
- R-Value Free: 0.242
- R-Value Work: 0.190
- R-Value Observed: 0.192
Starting Model: experimental
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This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Lipase | 269 | Thermomyces lanuginosus | Mutation(s): 0 EC: 3.1.1.3 |  | |
UniProt | |||||
Find proteins for O59952 (Thermomyces lanuginosus) Explore O59952 Go to UniProtKB: O59952 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O59952 | ||||
Glycosylation | |||||
| Glycosylation Sites: 1 | |||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAG Query on NAG | C [auth A], D [auth B] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.55 Å
- R-Value Free: 0.242
- R-Value Work: 0.190
- R-Value Observed: 0.192
- Space Group: P 61
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 139.868 | α = 90 |
| b = 139.868 | β = 90 |
| c = 80.488 | γ = 120 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data collection |
| AMoRE | phasing |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
Entry History
Deposition Data
- Released Date: 2012-09-19 Deposition Author(s): Shukla, P.K., Sinha, M., Mukherjee, J., Gupta, M.N., Kaur, P., Sharma, S., Singh, T.P.
Revision History (Full details and data files)
- Version 1.0: 2012-09-19
Type: Initial release - Version 1.1: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Structure summary - Version 1.2: 2023-11-08
Changes: Data collection, Database references, Refinement description, Structure summary - Version 1.3: 2024-10-16
Changes: Structure summary
