Download MendeleyStructure of gene product AF1437 from Archaeoglobus fulgidus
Cuff, M.E., Xu, X., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)To be published.
1Y8A | pdb_00001y8a
Structure of gene product AF1437 from Archaeoglobus fulgidus
- PDB DOI: https://doi.org/10.2210/pdb1Y8A/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Archaeoglobus fulgidus DSM 4304
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2004-12-10 Released: 2005-01-25
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.223 (Depositor), 0.220 (DCC)
- R-Value Work: 0.183 (Depositor), 0.180 (DCC)
- R-Value Observed: 0.185 (Depositor)
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| hypothetical protein AF1437 | 332 | Archaeoglobus fulgidus DSM 4304 | Mutation(s): 0 Gene Names: AF1437 |  | |
UniProt | |||||
Find proteins for O28835 (Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)) Explore O28835 Go to UniProtKB: O28835 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O28835 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | B [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.223 (Depositor), 0.220 (DCC)
- R-Value Work: 0.183 (Depositor), 0.180 (DCC)
- R-Value Observed: 0.185 (Depositor)
Space Group: P 21 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 74.9 | α = 90 |
| b = 84.027 | β = 90 |
| c = 44.175 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| SHELXD | phasing |
| MLPHARE | phasing |
| autoSHARP | phasing |
Entry History
Deposition Data
- Released Date: 2005-01-25 Deposition Author(s): Cuff, M.E., Xu, X., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2005-01-25
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Source and taxonomy, Version format compliance - Version 1.3: 2024-02-14
Changes: Data collection, Database references, Derived calculations
