Download MendeleyThe Crystal Structure of Chorismate Mutase from Thermus Thermophilus
Inagaki, E., Kuramitsu, S., Yokoyama, S., Miyano, M., Tahirov, T.H.To be published.
1UFY | pdb_00001ufy
Crystal analysis of chorismate mutase from thermus thermophilus
- PDB DOI: https://doi.org/10.2210/pdb1UFY/pdb
- Classification: ISOMERASE
- Organism(s): Thermus thermophilus HB8
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2003-06-11 Released: 2003-07-01
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 0.96 Å
- R-Value Free: 0.127 (Depositor), 0.130 (DCC)
- R-Value Work: 0.110 (Depositor), 0.130 (DCC)
- R-Value Observed: 0.110 (Depositor)
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Chorismate mutase | 122 | Thermus thermophilus HB8 | Mutation(s): 0 EC: 5.4.99.5 |  | |
UniProt | |||||
Find proteins for Q84FH6 (Thermus thermophilus) Explore Q84FH6 Go to UniProtKB: Q84FH6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q84FH6 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MES Query on MES | D [auth A], E [auth A], F [auth A], G [auth A] | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID C6 H13 N O4 S SXGZJKUKBWWHRA-UHFFFAOYSA-N |  | ||
| MLI Query on MLI | C [auth A] | MALONATE ION C3 H2 O4 OFOBLEOULBTSOW-UHFFFAOYSA-L |  | ||
| CL Query on CL | B [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 0.96 Å
- R-Value Free: 0.127 (Depositor), 0.130 (DCC)
- R-Value Work: 0.110 (Depositor), 0.130 (DCC)
- R-Value Observed: 0.110 (Depositor)
Space Group: H 3 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 71.252 | α = 90 |
| b = 71.252 | β = 90 |
| c = 152.36 | γ = 120 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data collection |
| SCALEPACK | data scaling |
| CNS | refinement |
| SHELXL-97 | refinement |
| HKL-2000 | data reduction |
| CNS | phasing |
Entry History
Deposition Data
- Released Date: 2003-07-01 Deposition Author(s): Inagaki, E., Miyano, M., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2003-07-01
Type: Initial release - Version 1.1: 2008-04-27
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Source and taxonomy, Version format compliance - Version 1.3: 2023-10-25
Changes: Data collection, Database references, Derived calculations, Refinement description
