Download MendeleyIdentification of the Primary Receptor Binding Site of Shiga-Like Toxin B Subunits: Structures of Mutated Shiga-Like Toxin I B-Pentamer with and without Bound Carbohydrate
Ling, H., Bast, D., Brunton, J.L., Read, R.J.To be published.
1C48 | pdb_00001c48
MUTATED SHIGA-LIKE TOXIN B SUBUNIT (G62T)
- PDB DOI: https://doi.org/10.2210/pdb1C48/pdb
- Classification: TOXIN
- Organism(s): Phage h30
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 1999-08-11 Released: 2000-08-16
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.240 (Depositor), 0.240 (DCC)
- R-Value Work: 0.196 (Depositor), 0.200 (DCC)
- R-Value Observed: 0.196 (Depositor)
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.5 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| PROTEIN (SHIGA-LIKE TOXIN I B SUBUNIT) | 69 | Phage h30 | Mutation(s): 1 |  | |
UniProt | |||||
Find proteins for P69178 (Bacteriophage H30) Explore P69178 Go to UniProtKB: P69178 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P69178 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.240 (Depositor), 0.240 (DCC)
- R-Value Work: 0.196 (Depositor), 0.200 (DCC)
- R-Value Observed: 0.196 (Depositor)
Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 93.972 | α = 90 |
| b = 61.928 | β = 114.12 |
| c = 60.327 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| AMoRE | phasing |
| CNS | refinement |
Entry History
Deposition Data
- Released Date: 2000-08-16 Deposition Author(s): Ling, H., Bast, D., Brunton, J.L., Read, R.J.
Revision History (Full details and data files)
- Version 1.0: 2000-08-16
Type: Initial release - Version 1.1: 2008-04-26
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2021-11-03
Changes: Database references - Version 1.4: 2023-08-09
Changes: Data collection, Refinement description - Version 1.5: 2024-11-20
Changes: Structure summary
