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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "STRUCTURAL PROTEIN"

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Search Summary

This query matches 3,367 Structures.

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Structure Determination Methodology

experimental (3,367)

Scientific Name of Source Organism

	Homo sapiens (1,357)
	Mus musculus (214)
	Gallus gallus (176)
	Rattus norvegicus (170)
	Bos taurus (144)
	Oryctolagus cuniculus (140)
	synthetic construct (140)
	Sus scrofa (118)
	Xenopus laevis (104)
	Escherichia coli (84)

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Taxonomy

	Eukaryota (2,426)
	Bacteria (733)
	other sequences (143)
	Duplodnaviria (88)
	Archaea (80)
	Riboviria (77)
	Eukaryota (eukaryotes) (47)
	Varidnaviria (12)
	Monodnaviria (7)
	unclassified sequences (7)

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Experimental Method

	X-RAY DIFFRACTION (2,184)
	ELECTRON MICROSCOPY (841)
	SOLUTION NMR (328)
	ELECTRON CRYSTALLOGRAPHY (6)
	SOLID-STATE NMR (6)
	SOLUTION SCATTERING (3)
	FIBER DIFFRACTION (2)

Polymer Entity Type

	Protein (3,367)
	DNA (212)
	RNA (37)

Refinement Resolution (Å)

	0.5 - 1.0 (12)
	1.0 - 1.5 (219)
	1.5 - 2.0 (648)
	2.0 - 2.5 (660)
	2.5 - 3.0 (573)
	3.0 - 3.5 (417)
	3.5 - 4.0 (247)
	4.0 - 4.5 (94)
	> 4.5 (162)

Release Date

	1995 - 1999 (18)
	2000 - 2004 (229)
	2005 - 2009 (495)
	2010 - 2014 (480)
	2015 - 2019 (739)
	2020 - 2024 (1,331)
	2025 - 2029 (75)

Enzyme Classification Name

	Hydrolases (627)
	Transferases (244)
	Oxidoreductases (39)
	Isomerases (18)
	Lyases (18)
	Ligases (11)
	Translocases (7)

Membrane Protein Annotation

	PDBTM (124)
	mpstruc (127)
	OPM (104)
	MemProtMD (63)

Symmetry Type

	Asymmetric (2,142)
	Cyclic (964)
	Helical (229)
	Dihedral (122)
	Icosahedral (26)
	Octahedral (9)
	Tetrahedral (7)

SCOP Classification

	All alpha proteins (312)
	All beta proteins (397)
	Alpha and beta proteins (a+b) (273)
	Alpha and beta proteins (a/b) (216)
	Artifacts (284)
	Low resolution protein structures (11)
	Designed proteins (19)
	Coiled coil proteins (11)
	Small proteins (17)
	Multi-domain proteins (alpha and beta) (6)

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AllSelected

1 to 25 of 3,367 Structures

Page 1 of 135

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3BFQ \| pdb_00003bfq	Download File View File

Crystal structure of truncated FimG (FimGt) in complex with the donor strand peptide of FimF (DSF)

Eidam, O., Capitani, G., Grutter, M.G.

(2008) Structure 16: 631-642

Released	2008-03-04
Method	X-RAY DIFFRACTION 1.34 Å
Organisms	Escherichia coli Escherichia coli str. K-12 substr. W3110
Macromolecule	Protein fimF (protein) Protein fimG (protein)
Unique Ligands	CO

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3BFW \| pdb_00003bfw	Download File View File

Crystal structure of truncated FimG (FimGt) in complex with the donor strand peptide of FimF (DSF)

Eidam, O., Capitani, G., Grutter, M.G.

(2008) Structure 16: 631-642

Released	2008-03-04
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli Escherichia coli str. K-12 substr. W3110
Macromolecule	Protein fimF (protein) Protein fimG (protein)
Unique Ligands	YT3

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3KNB \| pdb_00003knb	Download File View File

Crystal structure of the titin C-terminus in complex with obscurin-like 1

Sauer, F., Vahokoski, J., Wilmanns, M.

(2010) EMBO Rep 11: 534-540

Released	2009-12-01
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Obscurin-like protein 1 (protein) Titin (protein)
Unique Ligands	SO4

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1AG4 \| pdb_00001ag4	Download File View File

NMR STRUCTURE OF SPHERULIN 3A (S3A) FROM PHYSARUM POLYCEPHALUM, MINIMIZED AVERAGE STRUCTURE

Rosinke, B., Renner, C., Mayr, E.-M., Jaenicke, R., Holak, T.A.

(1997) J Mol Biology 271: 645-655

Released	1998-04-08
Method	SOLUTION NMR
Organisms	Physarum polycephalum
Macromolecule	SPHERULIN 3A (protein)

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1AOH \| pdb_00001aoh	Download File View File

SINGLE COHESIN DOMAIN FROM THE SCAFFOLDING PROTEIN CIPA OF THE CLOSTRIDIUM THERMOCELLUM CELLULOSOME

Alzari, P.M., Tavares, G.

(1997) J Mol Biology 273: 701-713

Released	1998-07-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	Cellulosomal-scaffolding protein A (protein)

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1BHD \| pdb_00001bhd	Download File View File

SECOND CALPONIN HOMOLOGY DOMAIN FROM UTROPHIN

Keep, N.H., Winder, S.J., Kendrick-Jones, J.

(1999) J Mol Biology 285: 1257-1264

Released	1999-01-13
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	UTROPHIN (protein)

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1BKV \| pdb_00001bkv	Download File View File

COLLAGEN

Kramer, R.Z., Bella, J., Mayville, P., Brodsky, B., Berman, H.M.

(1999) Nat Struct Biol 6: 454-457

Released	1999-02-16
Method	X-RAY DIFFRACTION 2 Å
Macromolecule	T3-785 (protein)
Unique Ligands	ACY

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1CF1 \| pdb_00001cf1	Download File View File

ARRESTIN FROM BOVINE ROD OUTER SEGMENTS

Hirsch, J.A., Schubert, C., Gurevich, V.V., Sigler, P.B.

(1999) Cell 97: 257-269

Released	1999-04-16
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Bos taurus
Macromolecule	PROTEIN (ARRESTIN) (protein)

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1CK4 \| pdb_00001ck4	Download File View File

CRYSTAL STRUCTURE OF RAT A1B1 INTEGRIN I-DOMAIN.

Nolte, M., Pepinsky, R.B., Venyaminov, S.Y., Koteliansky, V., Gotwals, P.J., Karpusas, M.

(1999) FEBS Lett 452: 379-385

Released	2000-05-03
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Rattus norvegicus
Macromolecule	INTEGRIN ALPHA-1 (protein)

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1CUN \| pdb_00001cun	Download File View File

CRYSTAL STRUCTURE OF REPEATS 16 AND 17 OF CHICKEN BRAIN ALPHA SPECTRIN

Grum, V.L., Li, D., MacDonald, R.I., Mondragon, A.

(1999) Cell 98: 523-535

Released	1999-10-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Gallus gallus
Macromolecule	PROTEIN (ALPHA SPECTRIN) (protein)

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1CWV \| pdb_00001cwv	Download File View File

CRYSTAL STRUCTURE OF INVASIN: A BACTERIAL INTEGRIN-BINDING PROTEIN

Bjorkman, P.J., Hamburger, Z.A.

(1999) Science 286: 291-295

Released	1999-10-13
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Yersinia pseudotuberculosis
Macromolecule	INVASIN (protein)
Unique Ligands	CIT

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1D2O \| pdb_00001d2o	Download File View File

CRYSTAL STRUCTURE OF A SINGLE B REPEAT UNIT (B1) OF COLLAGEN BINDING SURFACE PROTEIN (CNA) OF STAPHYLOCOCCUS AUREUS.

Deivanayagam, C.C.S., Rich, R.L., Hook, M., Narayana, S.V.L.

(2000) Structure 8: 67-78

Released	2000-09-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Staphylococcus aureus
Macromolecule	COLLAGEN ADHESIN (protein)

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1D2P \| pdb_00001d2p	Download File View File

CRYSTAL STRUCTURE OF TWO B REPEAT UNITS (B1B2) OF THE COLLAGEN BINDING PROTEIN (CNA) OF STAPHYLOCOCCUS AUREUS

Deivanayagam, C.C.S., Rich, R.L., Hook, M., Narayana, S.V.L.

(2000) Structure 8: 67-78

Released	2000-09-27
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Staphylococcus aureus
Macromolecule	COLLAGEN ADHESIN (protein)

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1DEB \| pdb_00001deb	Download File View File

CRYSTAL STRUCTURE OF THE N-TERMINAL COILED COIL DOMAIN FROM APC

Day, C.L., Alber, T.

(2000) J Mol Biology 301: 147-156

Released	2000-09-06
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	ADENOMATOUS POLYPOSIS COLI PROTEIN (protein)
Unique Ligands	SO4

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1DFC \| pdb_00001dfc	Download File View File

CRYSTAL STRUCTURE OF HUMAN FASCIN, AN ACTIN-CROSSLINKING PROTEIN

Fedorov, A.A., Fedorov, E.V., Ono, S., Matsumura, F., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2010) J Mol Biology 400: 589-604

Released	2000-11-22
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	FASCIN (protein)

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1DJ8 \| pdb_00001dj8	Download File View File

CRYSTAL STRUCTURE OF E. COLI PERIPLASMIC PROTEIN HDEA

Gajiwala, K.S., Burley, S.K.

(2000) J Mol Biology 295: 605-612

Released	1999-12-10
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	PROTEIN HNS-DEPENDENT EXPRESSION A (protein)

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1DTL \| pdb_00001dtl	Download File View File

CRYSTAL STRUCTURE OF CALCIUM-SATURATED (3CA2+) CARDIAC TROPONIN C COMPLEXED WITH THE CALCIUM SENSITIZER BEPRIDIL AT 2.15 A RESOLUTION

Li, Y., Love, M.L., Putkey, J.A., Cohen, C.

(2000) Proc Natl Acad Sci U S A 97: 5140-5145

Released	2000-05-12
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Gallus gallus
Macromolecule	CARDIAC TROPONIN C (protein)
Unique Ligands	BEP, CA

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1DXX \| pdb_00001dxx	Download File View File

N-terminal Actin-binding Domain of Human Dystrophin

Norwood, F.L., Sutherland-Smith, A.J., Keep, N.H., Kendrick-Jones, J.

(2000) Structure 8: 481

Released	2000-05-16
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	DYSTROPHIN (protein)

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1E7N \| pdb_00001e7n	Download File View File

The N-terminal domain of beta-B2-crystallin resembles the putative ancestral homodimer

Clout, N.J., Basak, A., Wieligmann, K., Bateman, O.A., Jaenicke, R., Slingsby, C.

(2000) J Mol Biology 304: 253

Released	2000-10-05
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Mus musculus
Macromolecule	BETA-CRYSTALLIN B2 (protein)

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1E7O \| pdb_00001e7o	Download File View File

A-SPECTRIN SH3 DOMAIN A11V, V23L, M25V, V44I, V58L MUTATIONS

Vega, M.C., Serrano, L.

(2003) J Mol Biology 328: 221

Released	2003-05-21
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Gallus gallus
Macromolecule	SPECTRIN ALPHA CHAIN (protein)
Unique Ligands	GOL

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1EES \| pdb_00001ees	Download File View File

SOLUTION STRUCTURE OF CDC42HS COMPLEXED WITH A PEPTIDE DERIVED FROM P-21 ACTIVATED KINASE, NMR, 20 STRUCTURES

Gizachew, D., Guo, W., Chohan, K.C., Sutcliffe, M.J., Oswald, R.E.

(2000) Biochemistry 39: 3963-3971

Released	2000-03-29
Method	SOLUTION NMR
Organisms	Homo sapiens Mus musculus
Macromolecule	GTP-BINDING PROTEIN (protein) P21-ACTIVATED KINASE (protein)

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1EG3 \| pdb_00001eg3	Download File View File

STRUCTURE OF A DYSTROPHIN WW DOMAIN FRAGMENT IN COMPLEX WITH A BETA-DYSTROGLYCAN PEPTIDE

Huang, X., Poy, F., Zhang, R., Joachimiak, A., Sudol, M., Eck, M.J.

(2000) Nat Struct Biol 7: 634-638

Released	2000-08-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	DYSTROPHIN (protein)

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1EG4 \| pdb_00001eg4	Download File View File

STRUCTURE OF A DYSTROPHIN WW DOMAIN FRAGMENT IN COMPLEX WITH A BETA-DYSTROGLYCAN PEPTIDE

Huang, X., Poy, F., Zhang, R., Joachimiak, A., Sudol, M., Eck, M.J.

(2000) Nat Struct Biol 7: 634-638

Released	2000-08-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	BETA-DYSTROGLYCAN (protein) DYSTROPHIN (protein)

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1EL6 \| pdb_00001el6	Download File View File

STRUCTURE OF BACTERIOPHAGE T4 GENE PRODUCT 11, THE INTERFACE BETWEEN THE BASEPLATE AND SHORT TAIL FIBERS

Leiman, P.G., Kostyuchenko, V.A., Schneider, M.M., Kurochkina, L.P., Mesyanzhinov, V.V., Rossmann, M.G.

(2000) J Mol Biology 301: 975-985

Released	2000-04-05
Method	X-RAY DIFFRACTION 2 Å
Organisms	Tequatrovirus T4
Macromolecule	BASEPLATE STRUCTURAL PROTEIN GP11 (protein)

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1F2K \| pdb_00001f2k	Download File View File

CRYSTAL STRUCTURE OF ACANTHAMOEBA CASTELLANII PROFILIN II, CUBIC CRYSTAL FORM

Fedorov, A.A., Shi, W., Mahoney, N., Kaiser, D.A., Almo, S.C.

To be published

Released	2000-06-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Acanthamoeba castellanii
Macromolecule	PROFILIN II (protein)

1 to 25 of 3,367 Structures

Page 1 of 135

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

3BFQ | pdb_00003bfq

3BFW | pdb_00003bfw

3KNB | pdb_00003knb

1AG4 | pdb_00001ag4

1AOH | pdb_00001aoh

1BHD | pdb_00001bhd

1BKV | pdb_00001bkv

1CF1 | pdb_00001cf1

1CK4 | pdb_00001ck4

1CUN | pdb_00001cun

1CWV | pdb_00001cwv

1D2O | pdb_00001d2o

1D2P | pdb_00001d2p

1DEB | pdb_00001deb

1DFC | pdb_00001dfc

1DJ8 | pdb_00001dj8

1DTL | pdb_00001dtl

1DXX | pdb_00001dxx

1E7N | pdb_00001e7n

1E7O | pdb_00001e7o

1EES | pdb_00001ees

1EG3 | pdb_00001eg3

1EG4 | pdb_00001eg4

1EL6 | pdb_00001el6

1F2K | pdb_00001f2k