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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Staphylococcus aureus subsp. aureus NCTC 8325"

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Search Summary

This query matches 175 Structures.

Refinements

Structure Determination Methodology

experimental (175)

Scientific Name of Source Organism

	Staphylococcus aureus subsp. aureus NCTC 8325 (169)
	synthetic construct (11)
	Staphylococcus aureus (6)
	Homo sapiens (5)
	Staphylococcus aureus subsp. aureus RN4220 (5)
	Escherichia coli K-12 (4)
	Escherichia coli (3)
	Kayvirus G1 (3)
	Mus musculus (2)
	Sesbania mosaic virus (2)

More...

Taxonomy

	Bacteria (175)
	other sequences (11)
	Eukaryota (7)
	Duplodnaviria (3)
	Riboviria (2)

Experimental Method

	X-RAY DIFFRACTION (152)
	ELECTRON MICROSCOPY (21)
	SOLUTION NMR (2)

Polymer Entity Type

	Protein (175)
	RNA (29)
	DNA (2)

Refinement Resolution (Å)

	1.0 - 1.5 (15)
	1.5 - 2.0 (56)
	2.0 - 2.5 (57)
	2.5 - 3.0 (18)
	3.0 - 3.5 (16)
	3.5 - 4.0 (10)
	4.0 - 4.5 (1)

Release Date

	1980 - 1984 (1)
	2000 - 2004 (1)
	2005 - 2009 (5)
	2010 - 2014 (60)
	2015 - 2019 (45)
	2020 - 2024 (58)
	2025 - 2029 (5)

Enzyme Classification Name

	Hydrolases (27)
	Transferases (21)
	Isomerases (6)
	Lyases (7)
	Oxidoreductases (5)
	Ligases (5)

Membrane Protein Annotation

	OPM (2)
	MemProtMD (1)
	PDBTM (1)
	mpstruc (1)

Symmetry Type

	Asymmetric (110)
	Cyclic (47)
	Dihedral (21)
	Icosahedral (2)

SCOP Classification

	Alpha and beta proteins (a/b) (29)
	All beta proteins (18)
	Alpha and beta proteins (a+b) (14)
	Artifacts (14)
	Small proteins (3)
	All alpha proteins (5)

AllSelected

1 to 25 of 175 Structures

Page 1 of 7

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1FC2 \| pdb_00001fc2	Download File View File

Crystallographic Refinement and Atomic Models of a Human FC Fragment and its Complex with Fragment B of Protein A from Staphylococcus Aureus at 2.9-and 2.8-Angstroms Resolution

Deisenhofer, J.

(1981) Biochemistry 20: 2361-2370

Released	1981-10-02
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	FRAGMENT B OF PROTEIN A COMPLEX (protein) IMMUNOGLOBULIN FC (protein)
Unique Ligands	SO4
Unique branched monosaccharides	FUC, GAL, MAN, NAG

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1QWY \| pdb_00001qwy	Download File View File

Latent LytM at 1.3 A resolution

Odintsov, S.G., Sabala, I., Marcyjaniak, M., Bochtler, M.

(2004) J Mol Biology 335: 775-785

Released	2004-01-20
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	peptidoglycan hydrolase (protein)
Unique Ligands	ZN

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2JG1 \| pdb_00002jg1	Download File View File

STRUCTURE OF Staphylococcus aureus D-TAGATOSE-6-PHOSPHATE KINASE with cofactor and substrate

Miallau, L., Hunter, W.N., McSweeney, S.M., Leonard, G.A.

(2007) J Biological Chem 282: 19948

Released	2007-04-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	TAGATOSE-6-PHOSPHATE KINASE (protein)
Unique Ligands	ANP, MG, TA6

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2JGV \| pdb_00002jgv	Download File View File

STRUCTURE OF Staphylococcus aureus D-TAGATOSE-6-PHOSPHATE KINASE in complex with ADP

Miallau, L., Hunter, W.N., McSweeney, S.M., Leonard, G.A.

(2007) J Biological Chem 282: 19948

Released	2007-04-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	TAGATOSE-6-PHOSPHATE KINASE (protein)
Unique Ligands	ADP

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2RKY \| pdb_00002rky	Download File View File

Crystal structure of the fourth and fifth fibronectin F1 modules in complex with a fragment of staphylococcus aureus fnbpa-1

Bingham, R.J.

(2008) Proc Natl Acad Sci U S A 105: 12254-12258

Released	2008-08-05
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens Staphylococcus aureus (strain NCTC 8325 / PS 47)
Macromolecule	Fibronectin (protein) Fibronectin-binding protein (protein)
Unique Ligands	K, SCN

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2RKZ \| pdb_00002rkz	Download File View File

Crystal structure of the second and third fibronectin f1 modules in complex with a fragment of staphylococcus aureus fnbpa-1

Bingham, R.J.

(2008) Proc Natl Acad Sci U S A 105: 12254-12258

Released	2008-08-05
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	Fibronectin (protein) peptide from Fibronectin-binding protein A (protein)
Unique Ligands	SIN

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3AG5 \| pdb_00003ag5	Download File View File

Crystal Structure of Pantothenate Synthetase from Staphylococcus aureus

Satoh, A., Konishi, S., Tamura, H., Stickland, H.G., Whitney, H.M., Smith, A.G., Matsumura, H., Inoue, T.

(2010) Biochemistry 49: 6400-6410

Released	2010-07-21
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	Pantothenate synthetase (protein)

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3AG6 \| pdb_00003ag6	Download File View File

Crystal Structure of Pantothenate Synthetase from Staphylococcus aureus in complex with pantoyl adenylate

Satoh, A., Konishi, S., Tamura, H., Stickland, H.G., Whitney, H.M., Smith, A.G., Matsumura, H., Inoue, T.

(2010) Biochemistry 49: 6400-6410

Released	2010-07-21
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	Pantothenate synthetase (protein)
Unique Ligands	ACY, PAJ, PG4

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3CAL \| pdb_00003cal	Download File View File

Crystal structure of the second and third fibronectin F1 modules in complex with a fragment of staphylococcus aureus fnbpa-5

Bingham, R.J.

(2008) Proc Natl Acad Sci U S A 105: 12254-12258

Released	2008-08-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	Fibronectin (protein) peptide from Fibronectin-binding protein A (protein)

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3I41 \| pdb_00003i41	Download File View File

Crystal structure of beta toxin from Staphylococcus aureus F277A, P278A mutant

Huseby, M., Shi, K., Kruse, A.C., Ohlendorf, D.H.

To be published

Released	2010-07-14
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Staphylococcus aureus subsp. aureus RN4220
Macromolecule	Beta-hemolysin (protein)

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3I46 \| pdb_00003i46	Download File View File

Crystal structure of beta toxin from Staphylococcus aureus F277A, P278A mutant with bound calcium ions

Huseby, M., Shi, K., Kruse, A.C., Ohlendorf, D.H.

To be published

Released	2010-07-14
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Staphylococcus aureus subsp. aureus RN4220
Macromolecule	Beta-hemolysin (protein)
Unique Ligands	CA, CL

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3I48 \| pdb_00003i48	Download File View File

Crystal structure of beta toxin from Staphylococcus aureus F277A, P278A mutant with bound magnesium ions

Huseby, M., Shi, K., Kruse, A.C., Ohlendorf, D.H.

(2009) To be published

Released	2010-07-14
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Staphylococcus aureus subsp. aureus RN4220
Macromolecule	Beta-hemolysin (protein)
Unique Ligands	MG, PO4

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3I5V \| pdb_00003i5v	Download File View File

Crystal structure of beta toxin 275-280 from Staphylococcus aureus

Huseby, M., Shi, K., Kruse, A.C., Ohlendorf, D.H.

To be published

Released	2010-08-11
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Staphylococcus aureus subsp. aureus RN4220
Macromolecule	Beta-hemolysin (protein)
Unique Ligands	DGA

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3K55 \| pdb_00003k55	Download File View File

Structure of beta hairpin deletion mutant of beta toxin from Staphylococcus aureus

Kruse, A.C., Huseby, M., Shi, K., Digre, J., Ohlendorf, D.H., Earhart, C.A.

(2011) Acta Crystallogr Sect F Struct Biol Cryst Commun 67: 438-441

Released	2011-01-26
Method	X-RAY DIFFRACTION 3.35 Å
Organisms	Staphylococcus aureus subsp. aureus RN4220
Macromolecule	Beta-hemolysin (protein)
Unique Ligands	CL, NA

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3P12 \| pdb_00003p12	Download File View File

Crystal Structure of D-ribose Pyranase Sa240

Wu, M., Wang, L., Zang, J.

(2011) J Struct Biol 174: 413-419

Released	2011-05-25
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	D-ribose pyranase (protein)
Unique Ligands	GOL

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3P13 \| pdb_00003p13	Download File View File

Complex Structure of D-ribose Pyranase Sa240 with D-ribose

Wu, M., Wang, L., Zang, J.

(2011) J Struct Biol 174: 413-419

Released	2011-05-25
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	D-ribose pyranase (protein)
Unique Ligands	RIP

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3P7X \| pdb_00003p7x	Download File View File

Crystal structure of an atypical two-cysteine peroxiredoxin (SAOUHSC_01822) from Staphylococcus aureus NCTC8325

Bhattacharyya, S., Dutta, D., Ghosh, A.K., Das, A.K.

To be published

Released	2011-10-19
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	Probable thiol peroxidase (protein)
Unique Ligands	DTU, DTV, PG4, SO4

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3QFG \| pdb_00003qfg	Download File View File

Structure of a putative lipoprotein from Staphylococcus aureus subsp. aureus NCTC 8325

Filippova, E.V., Halavaty, A., Shuvalova, L., Minasov, G., Dubrovska, I., Winsor, J., Kiryukhina, O., Papazisi, L., Bagnoli, F., Falugi, F., Bottomley, M., Grandi, G., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2011-02-02
Method	X-RAY DIFFRACTION 3.08 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	Uncharacterized protein (protein)

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3QFK \| pdb_00003qfk	Download File View File

2.05 Angstrom Crystal Structure of Putative 5'-Nucleotidase from Staphylococcus aureus in complex with alpha-ketoglutarate

Minasov, G., Wawrzak, Z., Krishna, S.N., Halavaty, A., Shuvalova, L., Dubrovska, I., Winsor, J., Kiryukhina, O., Bagnoli, F., Falugi, F., Bottomley, M., Grandi, G., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2011-02-09
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	Uncharacterized protein (protein)
Unique Ligands	AKG, EDO, MN, PEG, ZN

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3QWD \| pdb_00003qwd	Download File View File

Crystal structure of ClpP from Staphylococcus aureus

Geiger, S.R., Boettcher, T., Sieber, S.A., Cramer, P.

(2011) Angew Chem Int Ed Engl 50: 5749-5752

Released	2011-05-18
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	ATP-dependent Clp protease proteolytic subunit (protein)
Unique Ligands	CL

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3R2T \| pdb_00003r2t	Download File View File

2.2 Angstrom Resolution Crystal Structure of Superantigen-like Protein from Staphylococcus aureus subsp. aureus NCTC 8325.

Minasov, G., Halavaty, A., Shuvalova, L., Dubrovska, I., Winsor, J., Kiryukhina, O., Falugi, F., Bottomley, M., Bagnoli, F., Grandi, G., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2011-03-23
Method	X-RAY DIFFRACTION 2.21 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	Putative uncharacterized protein (protein)
Unique Ligands	SO4

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3ROH \| pdb_00003roh	Download File View File

Crystal Structure of Leukotoxin (LukE) from Staphylococcus aureus subsp. aureus COL.

Minasov, G., Halavaty, A., Shuvalova, L., Dubrovska, I., Winsor, J., Bagnoli, F., Falugi, F., Bottomley, M., Grandi, G., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

(2016) Acta Crystallogr D Biol Crystallogr 72: 113-120

Released	2011-05-04
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	Leucotoxin LukEv (protein)
Unique Ligands	CL, PGE

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3RQT \| pdb_00003rqt	Download File View File

1.5 Angstrom Crystal Structure of the Complex of Ligand Binding Component of ABC-type Import System from Staphylococcus aureus with Nickel and two Histidines

To be published

Released	2011-05-11
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	Putative uncharacterized protein (protein)
Unique Ligands	EPE, HIS, NI, SO4

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3SJ7 \| pdb_00003sj7	Download File View File

Structure of beta-ketoacetyl-CoA reductase (FabG) from Staphylococcus aureus complex with NADPH

Dutta, D., Bhattacharyya, S., Das, A.K.

(2012) Proteins 80: 1250-1257

Released	2012-01-25
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	3-oxoacyl-(Acyl-carrier-protein) reductase (protein)
Unique Ligands	NDP, PG4