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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "BC_2753"

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Search Summary

This query matches 42 Structures.

Refinements

Structure Determination Methodology

experimental (42)

Scientific Name of Source Organism

	Methanosarcina barkeri str. Fusaro (25)
	Methanosarcina barkeri (11)
	Methanosarcina barkeri MS (6)
	Methanocaldococcus jannaschii DSM 2661 (1)

Taxonomy

Archaea (42)

Experimental Method

X-RAY DIFFRACTION (42)

Polymer Entity Type

Protein (42)

Refinement Resolution (Å)

	1.5 - 2.0 (14)
	2.0 - 2.5 (18)
	2.5 - 3.0 (9)
	3.0 - 3.5 (1)

Release Date

	2000 - 2004 (7)
	2005 - 2009 (8)
	2010 - 2014 (20)
	2015 - 2019 (3)
	2020 - 2024 (4)

Enzyme Classification Name

	Oxidoreductases (16)
	Transferases (12)
	Ligases (10)
	Lyases (1)
	Isomerases (1)

Symmetry Type

	Asymmetric (22)
	Cyclic (15)
	Dihedral (15)
	Tetrahedral (3)

SCOP Classification

	Alpha and beta proteins (a+b) (2)
	Alpha and beta proteins (a/b) (6)
	All alpha proteins (1)
	Multi-domain proteins (alpha and beta) (3)

AllSelected

1 to 25 of 42 Structures

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1E6Y	Download File View File

Methyl-coenzyme M reductase from Methanosarcina barkeri

Grabarse, W., Ermler, U.

(2000) J Mol Biology 303: 329

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Methanosarcina barkeri
Macromolecule	METHYL-COENZYME M REDUCTASE I BETA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE SUBUNIT ALPHA (protein) METHYL-COENZYME M REDUCTASE SUBUNIT GAMMA (protein)
Unique Ligands	COM, F43, GOL, TP7

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1L2Q	Download File View File

Crystal Structure of the Methanosarcina barkeri Monomethylamine Methyltransferase (MtmB)

Hao, B., Gong, W., Ferguson, T.K., James, C.M., Krzycki, J.A., Chan, M.K.

(2002) Science 296: 1462-1466

Released	2002-06-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Methanosarcina barkeri
Macromolecule	monomethylamine methyltransferase (protein)
Unique Ligands	NH4

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1M5S	Download File View File

Formylmethanofuran:tetrahydromethanopterin fromyltransferase from Methanosarcina barkeri

Mamat, B., Roth, A., Grimm, C., Ermler, U., Tziatzios, C., Schubert, D., Thauer, R.K., Shima, S.

(2002) Protein Sci 11: 2168-2178

Released	2002-07-26
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Methanosarcina barkeri
Macromolecule	Formylmethanofuran--tetrahydromethanopterin formyltransferase (protein)

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1NTH	Download File View File

Crystal structure of the methanosarcina barkeri monomethylamine methyltransferase (MTMB)

Hao, B., Gong, W., Ferguson, T.K., James, C.M., Krzycki, J.A., Chan, M.K.

(2002) Science 296: 1462-1466

Released	2003-02-04
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Methanosarcina barkeri
Macromolecule	Monomethylamine methyltransferase mtmB1 (protein)

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1TV2	Download File View File

Crystal structure of the hydroxylamine MtmB complex

Hao, B., Zhao, G., Kang, P.T., Soares, J.A., Ferguson, T.K., Gallucci, J., Krzycki, J.A., Chan, M.K.

(2004) Chem Biol 11: 1317-1324

Released	2004-10-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanosarcina barkeri
Macromolecule	Monomethylamine methyltransferase mtmB1 (protein)
Unique Ligands	BG5

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1TV3	Download File View File

Crystal structure of the N-methyl-hydroxylamine MtmB complex

Hao, B., Zhao, G., Kang, P.T., Soares, J.A., Ferguson, T.K., Gallucci, J., Krzycki, J.A., Chan, M.K.

(2004) Chem Biol 11: 1317-1324

Released	2004-10-19
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Methanosarcina barkeri
Macromolecule	Monomethylamine methyltransferase mtmB1 (protein)
Unique Ligands	BG4

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1TV4	Download File View File

Crystal structure of the sulfite MtmB complex

Hao, B., Zhao, G., Kang, P.T., Soares, J.A., Ferguson, T.K., Gallucci, J., Krzycki, J.A., Chan, M.K.

(2004) Chem Biol 11: 1317-1324

Released	2004-10-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Methanosarcina barkeri
Macromolecule	Monomethylamine methyltransferase mtmB1 (protein)
Unique Ligands	BG3, SO4

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1Z69	Download File View File

Crystal structure of methylenetetrahydromethanopterin reductase (Mer) in complex with coenzyme F420

Aufhammer, S.W., Warkentin, E., Ermler, U., Hagemeier, C.H., Thauer, R.K., Shima, S.

(2005) Protein Sci 14: 1840-1849

Released	2005-06-21
Method	X-RAY DIFFRACTION 2.61 Å
Organisms	Methanosarcina barkeri
Macromolecule	Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase (protein)
Unique Ligands	1PG, CL, F42

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2CIM	Download File View File

Crystal structure of Methanosarcina barkeri seryl-tRNA synthetase

Bilokapic, S., Maier, T., Ahel, D., Gruic-Sovulj, I., Soll, D., Weygand-Durasevic, I., Ban, N.

(2006) EMBO J 25: 2498

Released	2006-06-26
Method	X-RAY DIFFRACTION 2.51 Å
Organisms	Methanosarcina barkeri str. Fusaro
Macromolecule	SERYL-TRNA SYNTHETASE (protein)
Unique Ligands	CL, PT, ZN

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2CJ9	Download File View File

Crystal structure of Methanosarcina barkeri seryl-tRNA synthetase complexed with an analog of seryladenylate

Bilokapic, S., Maier, T., Ahel, D., Gruic-Sovulj, I., Soll, D., Weygand-Durasevic, I., Ban, N.

(2006) EMBO J 25: 2498

Released	2006-06-26
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Methanosarcina barkeri str. Fusaro
Macromolecule	SERYL-TRNA SYNTHETASE (protein)
Unique Ligands	CL, SSA, ZN

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2CJA	Download File View File

Crystal structure of Methanosarcina barkeri seryl-tRNA synthetase complexed with ATP

Bilokapic, S., Maier, T., Ahel, D., Gruic-Sovulj, I., Soll, D., Weygand-Durasevic, I., Ban, N.

(2006) EMBO J 25: 2498

Released	2006-06-26
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Methanosarcina barkeri str. Fusaro
Macromolecule	SERYL-TRNA SYNTHETASE (protein)
Unique Ligands	ATP, CL, MG, ZN

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2CJB	Download File View File

Crystal structure of Methanosarcina barkeri seryl-tRNA synthetase complexed with serine

Bilokapic, S., Maier, T., Ahel, D., Gruic-Sovulj, I., Soll, D., Weygand-Durasevic, I., Ban, N.

(2006) EMBO J 25: 2498

Released	2006-06-26
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Methanosarcina barkeri str. Fusaro
Macromolecule	SERYL-TRNA SYNTHETASE (protein)
Unique Ligands	CL, SER, ZN

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2I2X	Download File View File

Crystal structure of methanol:cobalamin methyltransferase complex MtaBC from Methanosarcina barkeri

Hagemeier, C.H., Kruer, M., Thauer, R.K., Warkentin, E., Ermler, U.

(2006) Proc Natl Acad Sci U S A 103: 18917-18922

Released	2006-11-21
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Methanosarcina barkeri
Macromolecule	Methyltransferase 1 (protein)
Unique Ligands	B13, K, ZN

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3CF4	Download File View File

Structure of the CODH component of the M. barkeri ACDS complex

Gong, W., Hao, B., Wei, Z., Ferguson Jr., D.J., Tallant, T., Krzycki, J.A., Chan, M.K.

(2008) Proc Natl Acad Sci U S A 105: 9558-9563

Released	2008-07-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanosarcina barkeri
Macromolecule	Acetyl-CoA decarboxylase/synthase alpha subunit (protein) Acetyl-CoA decarboxylase/synthase epsilon subunit (protein)
Unique Ligands	ACY, CMO, FE, GOL, PEG, SF4, WCC

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3EZX	Download File View File

Structure of Methanosarcina barkeri monomethylamine corrinoid protein

Jain, R.

To be published

Released	2009-12-15
Method	X-RAY DIFFRACTION 2.56 Å
Organisms	Methanosarcina barkeri
Macromolecule	Monomethylamine corrinoid protein 1 (protein)
Unique Ligands	HCB, MG

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3P43	Download File View File

Structure and Activities of Archaeal Members of the LigD 3' Phosphoesterase DNA Repair Enzyme Superfamily

Smith, P., Nair, P.A., Das, U., Shuman, S.

(2011) Nucleic Acids Res 39: 3310-3320

Released	2011-01-19
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Methanosarcina barkeri str. Fusaro
Macromolecule	Putative uncharacterized protein (protein)
Unique Ligands	CL, MN, PO4

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3T7V	Download File View File

Crystal structure of methylornithine synthase (PylB)

Quitterer, F., List, A., Eisenreich, W., Bacher, A., Groll, M.

(2012) Angew Chem Int Ed Engl 51: 1339-1342

Released	2011-11-30
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Methanosarcina barkeri str. Fusaro
Macromolecule	methylornithine synthase PylB (protein)
Unique Ligands	MD0, SAM, SF4

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4FFL	Download File View File

PylC in complex with L-lysine

Quitterer, F., List, A., Beck, P., Bacher, A., Groll, M.

(2012) J Mol Biology 424: 270-282

Released	2012-09-19
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Methanosarcina barkeri str. Fusaro
Macromolecule	PylC (protein)
Unique Ligands	ADP, ATP, CO3, LYS, MG, PO4

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4FFM	Download File View File

PylC in complex with L-lysine-Ne-D-ornithine (cocrystallized with L-lysine-Ne-D-ornithine)

Quitterer, F., List, A., Beck, P., Bacher, A., Groll, M.

(2012) J Mol Biology 424: 270-282

Released	2012-09-19
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Methanosarcina barkeri str. Fusaro
Macromolecule	PylC (protein)
Unique Ligands	0TF, ADP, ATP, MG

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4FFN	Download File View File

PylC in complex with D-ornithine and AMPPNP

Quitterer, F., List, A., Beck, P., Bacher, A., Groll, M.

(2012) J Mol Biology 424: 270-282

Released	2012-09-19
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Methanosarcina barkeri str. Fusaro
Macromolecule	PylC (protein)
Unique Ligands	ANP, ATP, MG, ORD

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4FFO	Download File View File

PylC in complex with phosphorylated D-ornithine

Quitterer, F., List, A., Beck, P., Bacher, A., Groll, M.

(2012) J Mol Biology 424: 270-282

Released	2012-09-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanosarcina barkeri str. Fusaro
Macromolecule	PylC (protein)
Unique Ligands	0TK, ADP, ATP, MG

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4FFP	Download File View File

PylC in complex with L-lysine-Ne-D-ornithine (cocrystallized with L-lysine and D-ornithine)

Quitterer, F., List, A., Beck, P., Bacher, A., Groll, M.

(2012) J Mol Biology 424: 270-282

Released	2012-09-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanosarcina barkeri str. Fusaro
Macromolecule	Putative uncharacterized protein (protein)
Unique Ligands	0TF, ADP, MG, PO4

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4FFR	Download File View File

SeMet-labeled PylC (remote)

Quitterer, F., List, A., Beck, P., Bacher, A., Groll, M.

(2012) J Mol Biology 424: 270-282

Released	2012-09-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Methanosarcina barkeri str. Fusaro
Macromolecule	PylC (protein)
Unique Ligands	ATP, MG

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4J43	Download File View File

PylD holoenzyme

Quitterer, F., Beck, P., Bacher, A., Groll, M.

(2013) Angew Chem Int Ed Engl 52: 7033-7037

Released	2013-06-12
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Methanosarcina barkeri str. Fusaro
Macromolecule	PylD (protein)
Unique Ligands	MG, NA, NAD

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4J49	Download File View File

PylD holoenzyme soaked with L-lysine-Ne-D-ornithine

Quitterer, F., Beck, P., Bacher, A., Groll, M.

(2013) Angew Chem Int Ed Engl 52: 7033-7037

Released	2013-06-12
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Methanosarcina barkeri str. Fusaro
Macromolecule	PylD (protein)
Unique Ligands	1J1, MG, NA, NAD, NAI