RCSB PDB: Search

1EIJ \| pdb_00001eij	Download File View File

NMR ENSEMBLE OF METHANOBACTERIUM THERMOAUTOTROPHICUM PROTEIN 1615

Christendat, D., Booth, V., Gernstein, M., Arrowsmith, C.H., Edwards, A.M., Northeast Structural Genomics Consortium (NESG)

(2000) Nat Struct Biol 7: 903-909

Released	2000-11-03
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	HYPOTHETICAL PROTEIN MTH1615 (protein)

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1EJ2 \| pdb_00001ej2	Download File View File

Crystal structure of methanobacterium thermoautotrophicum nicotinamide mononucleotide adenylyltransferase with bound NAD+

Saridakis, V., Christendat, D., Kimber, M.S., Edwards, A.M., Pai, E.F., Midwest Center for Structural Genomics (MCSG), Northeast Structural Genomics Consortium (NESG)

(2001) J Biological Chem 276: 7225-7232

Released	2001-03-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE (protein)
Unique Ligands	NA, NAD, SO4

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1EJE \| pdb_00001eje	Download File View File

CRYSTAL STRUCTURE OF AN FMN-BINDING PROTEIN

Christendat, D., Saridakis, V., Bochkarev, A., Arrowsmith, C., Edwards, A.M., Northeast Structural Genomics Consortium (NESG)

(2000) Nat Struct Biol 7: 903-909

Released	2000-10-11
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	FMN-BINDING PROTEIN (protein)
Unique Ligands	FMN, NI, SO4

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1EP0 \| pdb_00001ep0	Download File View File

HIGH RESOLUTION CRYSTAL STRUCTURE OF DTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASE FROM METHANOBACTERIUM THERMOAUTOTROPHICUM

Christendat, D., Saridakis, V., Bochkarev, A., Pai, E.F., Arrowsmith, C.H., Edwards, A.M., Northeast Structural Genomics Consortium (NESG)

(2000) J Biological Chem 275: 24608-24612

Released	2000-12-13
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	DTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASE (protein)

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1EPZ \| pdb_00001epz	Download File View File

CRYSTAL STRUCTURE OF DTDP-6-DEOXY-D-XYLO-4-HEXULOASE 3,5-EPIMERASE FROM METHANOBACTERIUM THERMOAUTOTROPHICUM WITH BOUND LIGAND.

Christendat, D., Saridakis, V., Bochkarev, A., Pai, E.F., Arrowsmith, C., Edwards, A.M.

(2000) J Biological Chem 275: 24608-24612

Released	2000-12-13
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	DTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASE (protein)
Unique Ligands	TYD

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1GH9 \| pdb_00001gh9	Download File View File

SOLUTION STRUCTURE OF A 8.3 KDA PROTEIN (GENE MTH1184) FROM METHANOBACTERIUM THERMOAUTOTROPHICUM

Kozlov, G., Ekiel, I., Gehring, K., Northeast Structural Genomics Consortium (NESG)

(2000) Nat Struct Biol 7: 903-909

Released	2000-12-11
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	8.3 KDA PROTEIN (GENE MTH1184) (protein)

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1HYB \| pdb_00001hyb	Download File View File

CRYSTAL STRUCTURE OF AN ACTIVE SITE MUTANT OF METHANOBACTERIUM THERMOAUTOTROPHICUM NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE

Saridakis, V., Christendat, D., Kimber, M.S., Edwards, A.M., Pai, E.F.

(2001) J Biological Chem 276: 7225-7232

Released	2001-03-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE (protein)
Unique Ligands	NMN, SO4

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1J70 \| pdb_00001j70	Download File View File

CRYSTAL STRUCTURE OF YEAST ATP SULFURYLASE

Lalor, D.J., Schnyder, T., Saridakis, V., Pilloff, D.E., Dong, A., Tang, H., Leyh, T.S., Pai, E.F.

(2003) Protein Eng 16: 1071-1079

Released	2003-06-17
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ATP SULPHURYLASE (protein)
Unique Ligands	NA, PO4

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1KUU \| pdb_00001kuu	Download File View File

CRYSTAL STRUCTURE OF METHANOBACTERIUM THERMOAUTOTROPHICUM CONSERVED PROTEIN MTH1020 REVEALS AN NTN-HYDROLASE FOLD

Saridakis, V., Christendat, D., Thygesen, A., Arrowsmith, C.H., Edwards, A.M., Pai, E.F.

(2002) Proteins 48: 141-143

Released	2002-05-29
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Methanothermobacter
Macromolecule	conserved protein (protein)

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1L1S \| pdb_00001l1s	Download File View File

Structure of Protein of Unknown Function MTH1491 from Methanobacterium thermoautotrophicum

Christendat, D., Saridakis, V., Kim, Y., Kumar, P.A., Xu, X., Semesi, A., Joachimiak, A., Arrowsmith, C.H., Edwards, A.M., Midwest Center for Structural Genomics (MCSG)

(2002) Protein Sci 11: 1409-1414

Released	2002-05-29
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	hypothetical protein MTH1491 (protein)

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1M8F \| pdb_00001m8f	Download File View File

Crystal Structure Of Methanobacterium Thermoautotrophicum Nicotinamide Mononucleotide Adenylyltransferase Mutant R11A complexed with NAD

Saridakis, V., Pai, E.F.

(2003) J Biological Chem 278: 34356-34363

Released	2003-07-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	nicotinamide-nucleotide adenylyltransferase (protein)
Unique Ligands	NAD

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1M8G \| pdb_00001m8g	Download File View File

Crystal Structure Of Methanobacterium Thermoautotrophicum Nicotinamide Mononucleotide Adenylyltransferase Mutant R11K complexed with NAD

Saridakis, V., Pai, E.F.

(2003) J Biological Chem 278: 34356-34363

Released	2003-07-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Nicotinamide-nucleotide Adenylyltransferase (protein)
Unique Ligands	NAD

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1M8J \| pdb_00001m8j	Download File View File

Crystal Structure Of Methanobacterium Thermoautotrophicum Nicotinamide Mononucleotide Adenylyltransferase Mutant R136A complexed with NAD

Saridakis, V., Pai, E.F.

(2003) J Biological Chem 278: 34356-34363

Released	2003-07-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Nicotinamide-nucleotide Adenylyltransferase (protein)
Unique Ligands	NAD, SO4

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1M8K \| pdb_00001m8k	Download File View File

Crystal Structure Of Methanobacterium Thermoautotrophicum Nicotinamide Mononucleotide Adenylyltransferase Mutant H19A complexed with NAD

Saridakis, V., Pai, E.F.

(2003) J Biological Chem 278: 34356-34363

Released	2003-07-15
Method	X-RAY DIFFRACTION 3 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Nicotinamide-nucleotide Adenylyltransferase (protein)
Unique Ligands	NAD, SO4

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1NOG \| pdb_00001nog	Download File View File

Crystal Structure of Conserved Protein 0546 from Thermoplasma Acidophilum

Saridakis, V., Sanishvili, R., Iakounine, A., Xu, X., Pennycooke, M., Gu, J., Joachimiak, A., Arrowsmith, C.H., Edwards, A.M., Christendat, D., Midwest Center for Structural Genomics (MCSG)

(2004) J Biological Chem 279: 23646-23653

Released	2003-07-29
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Thermoplasma acidophilum
Macromolecule	conserved hypothetical protein TA0546 (protein)

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1Q1L \| pdb_00001q1l	Download File View File

Crystal Structure of Chorismate Synthase

Viola, C.M., Saridakis, V., Christendat, D., Midwest Center for Structural Genomics (MCSG)

(2004) Proteins 54: 166-169

Released	2003-09-30
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Aquifex aeolicus
Macromolecule	Chorismate synthase (protein)

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1R6X \| pdb_00001r6x	Download File View File

The Crystal Structure of a Truncated Form of Yeast ATP Sulfurylase, Lacking the C-Terminal APS Kinase-like Domain, in complex with Sulfate

Lalor, D.J., Schnyder, T., Saridakis, V., Pilloff, D.E., Dong, A., Tang, H., Leyh, T.S., Pai, E.F.

(2003) Protein Eng 16: 1071-1079

Released	2003-11-11
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ATP:sulfate adenylyltransferase (protein)
Unique Ligands	CO, SO4

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1T57 \| pdb_00001t57	Download File View File

Crystal Structure of the Conserved Protein MTH1675 from Methanobacterium thermoautotrophicum

Kim, Y., Joachimiak, A., Saridakis, V., Xu, X., Arrowsmith, C.H., Christendat, D., Edwards, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2004-08-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Conserved Protein MTH1675 (protein)
Unique Ligands	FMN, MG

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1YY6 \| pdb_00001yy6	Download File View File

The Crystal Structure of the N-terminal domain of HAUSP/USP7 complexed with an EBNA1 peptide

Saridakis, V., Sheng, Y., Sarkari, F., Holowaty, M., Shire, K., Nguyen, T., Zhang, R., Liao, J., Lee, W., Edwards, A.M., Arrowsmith, C.H., Frappier, L.

(2005) Mol Cell 18: 25-36

Released	2005-04-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Epstein-Barr virus (strain B95-8) Homo sapiens
Macromolecule	Epstein-Barr nuclear antigen-1 (protein) Ubiquitin carboxyl-terminal hydrolase 7 (protein)
Unique Ligands	NA

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1YZE \| pdb_00001yze	Download File View File

Crystal structure of the N-terminal domain of USP7/HAUSP.

Saridakis, V., Sheng, Y., Sarkari, F., Holowaty, M.N., Shire, K., Nguyen, T., Zhang, R.G., Liao, J., Lee, W., Edwards, A.M., Arrowsmith, C.H., Frappier, L.

(2005) Mol Cell 18: 25-36

Released	2005-04-05
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin carboxyl-terminal hydrolase 7 (protein)

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2FH0 \| pdb_00002fh0	Download File View File

NMR Ensemble of The Yeast Saccharomyces cerevisiae protein Ymr074cp core region

Hong, J.J., Zhang, J.H., Wu, J.H., Shi, Y.Y.

To be published

Released	2007-01-02
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae
Macromolecule	Hypothetical 16.0 kDa protein in ABF2-CHL12 intergenic region (protein)

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2FOJ \| pdb_00002foj	Download File View File

The Crystal Structure of the N-terminal domain of HAUSP/USP7 complexed with p53 peptide 364-367

Saridakis, V., Sheng, Y., Sarkari, F., Duan, S., Wu, T., Arrowsmith, C.H., Frappier, L.

(2006) Nat Struct Mol Biol 13: 285-291

Released	2006-02-14
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin carboxyl-terminal hydrolase 7 (protein) p53 peptide (protein)

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2FOO \| pdb_00002foo	Download File View File

The Crystal Structure of the N-terminal domain of HAUSP/USP7 complexed with p53 peptide 359-362

Saridakis, V., Sheng, Y., Sarkari, F., Duan, S., Wu, T., Arrowsmith, C.H., Frappier, L.

(2006) Nat Struct Mol Biol 13: 285-291

Released	2006-02-14
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin carboxyl-terminal hydrolase 7 (protein) p53 peptide (protein)

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2FOP \| pdb_00002fop	Download File View File

The Crystal Structure of the N-terminal domain of HAUSP/USP7 complexed with mdm2 peptide 147-150

Saridakis, V., Sheng, Y., Sarkari, F., Duan, S., Wu, T., Arrowsmith, C.H., Frappier, L.

(2006) Nat Struct Mol Biol 13: 285-291

Released	2006-02-14
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin carboxyl-terminal hydrolase 7 (protein) mdm2 peptide (protein)

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3BPV \| pdb_00003bpv	Download File View File

Crystal Structure of MarR

Saridakis, V., Shahinas, D., Xu, X., Christendat, D.

(2008) J Mol Biology 377: 655-667

Released	2008-05-20
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Macromolecule	Transcriptional regulator (protein)

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Experimental Method

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Refinement Resolution (Å)

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Enzyme Classification Name

Symmetry Type

SCOP Classification

1EIJ | pdb_00001eij

1EJ2 | pdb_00001ej2

1EJE | pdb_00001eje

1EP0 | pdb_00001ep0

1EPZ | pdb_00001epz

1GH9 | pdb_00001gh9

1HYB | pdb_00001hyb

1J70 | pdb_00001j70

1KUU | pdb_00001kuu

1L1S | pdb_00001l1s

1M8F | pdb_00001m8f

1M8G | pdb_00001m8g

1M8J | pdb_00001m8j

1M8K | pdb_00001m8k

1NOG | pdb_00001nog

1Q1L | pdb_00001q1l

1R6X | pdb_00001r6x

1T57 | pdb_00001t57

1YY6 | pdb_00001yy6

1YZE | pdb_00001yze

2FH0 | pdb_00002fh0

2FOJ | pdb_00002foj

2FOO | pdb_00002foo

2FOP | pdb_00002fop

3BPV | pdb_00003bpv