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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Parrish, C.R."

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Search Summary

This query matches 46 Structures.

Refinements

Structure Determination Methodology

experimental (46)

Scientific Name of Source Organism

	Canine parvovirus (11)
	Canis lupus familiaris (11)
	Mus musculus (8)
	Canine parvovirus 2a (4)
	Feline panleukopenia virus (4)
	Rattus norvegicus (4)
	Salmonella enterica subsp. enterica serovar Typhi (3)
	Canine parvovirus 2b (2)
	Canine parvovirus strain B (2)
	Canine parvovirus 2 (1)

More...

Taxonomy

	Monodnaviria (28)
	Eukaryota (25)
	Bacteria (3)

Experimental Method

	ELECTRON MICROSCOPY (28)
	X-RAY DIFFRACTION (18)

Polymer Entity Type

	Protein (46)
	DNA (3)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (7)
	2.5 - 3.0 (1)
	3.0 - 3.5 (14)
	3.5 - 4.0 (11)
	4.0 - 4.5 (2)
	> 4.5 (9)

Release Date

	1990 - 1994 (2)
	1995 - 1999 (3)
	2000 - 2004 (8)
	2005 - 2009 (10)
	2010 - 2014 (1)
	2015 - 2019 (3)
	2020 - 2024 (12)
	2025 - 2029 (7)

Symmetry Type

	Icosahedral (23)
	Asymmetric (19)
	Cyclic (4)

SCOP Classification

	All beta proteins (16)
	Alpha and beta proteins (a/b) (1)
	All alpha proteins (1)

AllSelected

1 to 25 of 46 Structures

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1C8D \| pdb_00001c8d	Download File View File

CANINE PANLEUKOPENIA VIRUS EMPTY CAPSID STRUCTURE

Rossmann, M.G., Simpson, A.A.

(2000) J Mol Biology 300: 597-610

Released	2000-08-09
Method	X-RAY DIFFRACTION 3 Å
Organisms	Canine parvovirus
Macromolecule	CANINE PARVOVIRUS CAPSID (protein)
Unique Ligands	CA

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1C8E \| pdb_00001c8e	Download File View File

FELINE PANLEUKOPENIA VIRUS EMPTY CAPSID STRUCTURE

Rossmann, M.G., Simpson, A.A.

(2000) J Mol Biology 300: 597-610

Released	2000-08-09
Method	X-RAY DIFFRACTION 3 Å
Organisms	Feline parvovirus
Macromolecule	FELINE PANLEUKOPENIA VIRUS CAPSID (protein)

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1C8F \| pdb_00001c8f	Download File View File

FELINE PANLEUKOPENIA VIRUS EMPTY CAPSID STRUCTURE

Rossmann, M.G., Simpson, A.A.

(2000) J Mol Biology 300: 597-610

Released	2000-08-09
Method	X-RAY DIFFRACTION 3 Å
Organisms	Feline panleukopenia virus
Macromolecule	FELINE PANLEUKOPENIA VIRUS CAPSID (protein)
Unique Ligands	CA

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1C8G \| pdb_00001c8g	Download File View File

FELINE PANLEUKOPENIA VIRUS EMPTY CAPSID STRUCTURE

Rossmann, M.G., Simpson, A.A.

(2000) J Mol Biology 300: 597-610

Released	2000-08-09
Method	X-RAY DIFFRACTION 3 Å
Organisms	Feline panleukopenia virus
Macromolecule	FELINE PANLEUKOPENIA VIRUS CAPSID (protein)
Unique Ligands	CA

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1C8H \| pdb_00001c8h	Download File View File

CANINE PARVOVIRUS STRAIN D EMPTY CAPSID STRUCTURE AT PH 5.5

Rossmann, M.G., Simpson, A.A.

(2000) J Mol Biology 300: 597-610

Released	2000-08-09
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Canine parvovirus
Macromolecule	CANINE PARVOVIRUS CAPSID (protein)
Unique Ligands	CA

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1DNV \| pdb_00001dnv	Download File View File

PARVOVIRUS (DENSOVIRUS) FROM GALLERIA MELLONELLA

Simpson, A.A., Chipmann, P.R., Baker, T.S., Tijssen, P., Rossmann, M.G.

(1998) Structure 6: 1355-1367

Released	1999-02-16
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Galleria mellonella densovirus
Macromolecule	GALLERIA MELLONELLA DENSOVIRUS CAPSID PROTEIN (protein)

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1FPV \| pdb_00001fpv	Download File View File

STRUCTURE DETERMINATION OF FELINE PANLEUKOPENIA VIRUS EMPTY PARTICLES

Agbandje, M., Rossmann, M.G.

(1993) Proteins 16: 155-171

Released	1994-01-31
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Feline panleukopenia virus
Macromolecule	FELINE PANLEUKOPENIA VIRUS (STRAIN B) VIRAL PROTEIN 2 (protein)

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1IJS \| pdb_00001ijs	Download File View File

CPV (STRAIN D) mutant A300D, complex (VIRAL COAT/DNA), VP2, PH=7.5, T=4 DEGREES C

Llamas-Saiz, A.L., Agbandje-McKenna, M., Parker, J.S.L., Wahid, A.T.M., Parrish, C.R., Rossmann, M.G.

(1996) Virology 225: 65-71

Released	1996-12-23
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Canine parvovirus
Macromolecule	PROTEIN (PARVOVIRUS COAT PROTEIN) (protein) DNA (5'-D(APC)-3') (nucleic acid) DNA (5'-D(CPCPAPCPCPCPCPAP*A)-3') (nucleic acid)

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1K3V \| pdb_00001k3v	Download File View File

Porcine Parvovirus Capsid

Simpson, A.A., Hebert, B., Sullivan, G.M., Parrish, C.R., Zadori, Z., Tijssen, P., Rossmann, M.G.

(2002) J Mol Biology 315: 1189-1198

Released	2001-10-24
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Porcine parvovirus
Macromolecule	capsid protein VP2 (protein)

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1MVM \| pdb_00001mvm	Download File View File

MVM(STRAIN I), COMPLEX(VIRAL COAT/DNA), VP2, PH=7.5, T=4 DEGREES C

Llamas-Saiz, A.L., Agbandje-McKenna, M., Rossmann, M.G.

(1997) Acta Crystallogr D Biol Crystallogr 53: 93-102

Released	1998-02-25
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Minute virus of mice
Macromolecule	PROTEIN (MURINE MINUTE VIRUS COAT PROTEIN) (protein) DNA (5'-D(CPAPAPA)-3') (nucleic acid) DNA (5'-D(CPCPAPCPCPCPCPAPAPCPA)-3') (nucleic acid) DNA (5'-D(PA)-3') (nucleic acid)

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1P5W \| pdb_00001p5w	Download File View File

The structures of host range controlling regions of the capsids of canine and feline parvoviruses and mutants

Agbandje-McKenna, M., Govindasamy, L.

(2003) J Virol 77: 12211-12221

Released	2003-08-26
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Canine parvovirus
Macromolecule	Coat protein VP2 (protein) 5'-D(P(3DR)PTPAPCPCPTPCPTPTPGP*C)-3' (nucleic acid)
Unique Ligands	MG

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1P5Y \| pdb_00001p5y	Download File View File

The structures of host range controlling regions of the capsids of canine and feline parvoviruses and mutants

Agbandje-McKenna, M., Govindasamy, L.

(2003) J Virol 77: 12211-12221

Released	2003-08-26
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Canine parvovirus
Macromolecule	Coat protein VP2 (protein)

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2CAS \| pdb_00002cas	Download File View File

THE CANINE PARVOVIRUS EMPTY CAPSID STRUCTURE

Wu, H., Rossmann, M.G.

(1993) J Mol Biology 233: 231-244

Released	1994-01-31
Method	X-RAY DIFFRACTION 3 Å
Organisms	Canine parvovirus
Macromolecule	CANINE PARVOVIRUS EMPTY CAPSID (STRAIN D) VIRAL PROTEIN 2 (protein)

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2NSU \| pdb_00002nsu	Download File View File

Crystal structure of the ectodomain of human transferrin receptor fitted into a cryo-EM reconstruction of canine parvovirus and feline transferrin receptor complex

Hafenstein, S., Kostyuchenko, V.A., Rossmann, M.G.

(2007) Proc Natl Acad Sci U S A 104: 6585-6589

Released	2007-03-27
Method	ELECTRON MICROSCOPY 27 Å
Organisms	Homo sapiens
Macromolecule	Transferrin receptor protein 1 (protein)

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3GK8 \| pdb_00003gk8	Download File View File

X-ray crystal structure of the Fab from MAb 14, mouse antibody against Canine Parvovirus

Hafenstein, S., Bowman, V., Sun, T., Nelson, C., Palermo, L., Chipman, P., Battisti, A., Parrish, C.

(2009) J Virol 83: 5556-5566

Released	2009-06-16
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mus musculus
Macromolecule	Fab 14 Heavy Chain (protein) Fab 14 Light Chain (protein)

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3IY0 \| pdb_00003iy0	Download File View File

Variable domains of the x-ray structure of Fab 14 fitted into the cryoEM reconstruction of the virus-Fab 14 complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 12.5 Å
Organisms	Mus musculus
Macromolecule	Fab 14, heavy domain (protein) Fab 14, light domain (protein)

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3IY1 \| pdb_00003iy1	Download File View File

Variable domains of the WAM of Fab B fitted into the cryoEM reconstruction of the virus-Fab B complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 18 Å
Organisms	Rattus norvegicus
Macromolecule	Fab B, heavy chain (protein) Fab B, light chain (protein)

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3IY2 \| pdb_00003iy2	Download File View File

Variable domains of the computer generated model (WAM) of Fab 6 fitted into the cryoEM reconstruction of the virus-Fab 6 complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 18 Å
Organisms	Mus musculus
Macromolecule	Antibody 6, heavy chain (protein) Antibody 6, light chain (protein)

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3IY3 \| pdb_00003iy3	Download File View File

Variable domains of the computer generated model (WAM) of Fab 8 fitted into the cryoEM reconstruction of the virus-Fab 8 complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 11.1 Å
Organisms	Mus musculus
Macromolecule	antibody fragment from neutralizing antibody 8 (heavy chain) (protein) antibody fragment from neutralizing antibody 8 (light chain) (protein)

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3IY4 \| pdb_00003iy4	Download File View File

Variable domains of the computer generated model (WAM) of Fab 15 fitted into the cryoEM reconstruction of the virus-Fab 15 complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 11.7 Å
Organisms	Mus musculus
Macromolecule	fragment of neutralizing antibody 15 (heavy chain) (protein) fragment of neutralizing antibody 15 (light chain) (protein)

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3IY5 \| pdb_00003iy5	Download File View File

Variable domains of the mouse Fab (1AIF) fitted into the cryoEM reconstruction of the virus-Fab 16 complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 18 Å
Organisms	Mus musculus
Macromolecule	antibody fragment IGG2A (heavy chain) (protein) antibody fragment IGG2A (light chain) (protein)

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3IY6 \| pdb_00003iy6	Download File View File

Variable domains of the computer generated model (WAM) of Fab E fitted into the cryoEM reconstruction of the virus-Fab E complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 12 Å
Organisms	Rattus norvegicus
Macromolecule	fragment from neutralizing antibody E (heavy chain) (protein) fragment from neutralizing antibody E (light chain) (protein)

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3IY7 \| pdb_00003iy7	Download File View File

Variable domains of the computer generated model (WAM) of Fab F fitted into the cryoEM reconstruction of the virus-Fab F complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 14 Å
Organisms	Rattus norvegicus
Macromolecule	fragment from neutralizing antibody F (heavy chain) (protein) fragment from neutralizing antibody F (light chain) (protein)

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3JCX \| pdb_00003jcx	Download File View File

Canine Parvovirus complexed with Fab E

Organtini, L.J., Iketani, S., Huang, K., Ashley, R.E., Makhov, A.M., Conway, J.F., Parrish, C.R., Hafenstein, S.

(2016) J Virol 90: 9733-9742

Released	2016-07-20
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Canine parvovirus Rattus norvegicus
Macromolecule	Capsid protein 2 (protein) Fab E heavy chain (protein) Fab E light chain (protein)