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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Organtini, L.J."

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Canine parvovirus (5)
	Homo sapiens (4)
	Mus musculus (2)
	Coxsackievirus B3 (1)
	Feline panleukopenia virus (1)
	Rattus norvegicus (1)

Taxonomy

	Eukaryota (7)
	Monodnaviria (6)
	Riboviria (1)

Experimental Method

	ELECTRON MICROSCOPY (10)
	X-RAY DIFFRACTION (1)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	2.0 - 2.5 (3)
	3.0 - 3.5 (1)
	3.5 - 4.0 (2)
	4.0 - 4.5 (1)
	> 4.5 (4)

Release Date

	2010 - 2014 (5)
	2015 - 2019 (2)
	2020 - 2024 (4)

Symmetry Type

	Icosahedral (9)
	Asymmetric (2)

SCOP Classification

All beta proteins (1)

AllSelected

1 to 11 of 11 Structures

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3J6L \| pdb_00003j6l	Download File View File

Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle

Organtini, L.J., Makhov, A.M., Conway, J.F., Hafenstein, S., Carson, S.D.

(2014) J Virol 88: 5755-5765

Released	2014-04-09
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Homo sapiens
Macromolecule	Coxsackievirus and adenovirus receptor (protein)
Unique Ligands	SO4

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3J6M \| pdb_00003j6m	Download File View File

Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle

Organtini, L.J., Makhov, A.M., Conway, J.F., Hafenstein, S., Carson, S.D.

(2014) J Virol 88: 5755-5765

Released	2014-04-09
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Homo sapiens
Macromolecule	Coxsackievirus and adenovirus receptor (protein)

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3J6N \| pdb_00003j6n	Download File View File

Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle

Organtini, L.J., Makhov, A.M., Conway, J.F., Hafenstein, S., Carson, S.D.

(2014) J Virol 88: 5755-5765

Released	2014-04-09
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Homo sapiens
Macromolecule	Coxsackie and adenovirus receptor (protein)

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3J6O \| pdb_00003j6o	Download File View File

Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle

Organtini, L.J., Makhov, A.M., Conway, J.F., Hafenstein, S., Carson, S.D.

(2014) J Virol 88: 5755-5765

Released	2014-04-09
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Homo sapiens
Macromolecule	Coxsackie and adenovirus receptor (protein)

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3JCX \| pdb_00003jcx	Download File View File

Canine Parvovirus complexed with Fab E

Organtini, L.J., Iketani, S., Huang, K., Ashley, R.E., Makhov, A.M., Conway, J.F., Parrish, C.R., Hafenstein, S.

(2016) J Virol 90: 9733-9742

Released	2016-07-20
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Canine parvovirus Rattus norvegicus
Macromolecule	Capsid protein 2 (protein) Fab E heavy chain (protein) Fab E light chain (protein)

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3JD7 \| pdb_00003jd7	Download File View File

The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs

Lee, H., Shingler, K.L., Organtini, L.J., Ashley, R.E., Makhov, A.M., Conway, J.F., Hafenstein, S.

(2016) Sci Adv 2: e1501929-e1501929

Released	2016-09-14
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Coxsackievirus B3
Macromolecule	Capsid protein VP1 (protein) Capsid protein VP2 (protein) Capsid protein VP3 (protein) Capsid protein VP4 (protein)
Unique Ligands	PLM

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4QYK \| pdb_00004qyk	Download File View File

Crystal structure of a canine parvovirus variant

Lukk, T., Organtini, L.J., Hafenstein, S.U.

(2015) J Virol 89: 1909-1912

Released	2014-12-10
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Feline panleukopenia virus
Macromolecule	Capsid protein VP1 (protein)
Unique Ligands	MG

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7M3L \| pdb_00007m3l	Download File View File

Canine parvovirus and Fab14 at partial occupancy

Goteschius, D.J., Hartmann, S.R., Hafenstein, S.L.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-07-28
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Canine parvovirus Mus musculus
Macromolecule	Capsid protein 2 (protein) Fab14 Heavy Chain (protein) Fab14 Light Chain (protein)

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7M3M \| pdb_00007m3m	Download File View File

Canine parvovirus and Fab14 at partial occupancy

Goteschius, D.J., Hartmann, S.R., Hafenstein, S.L.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-07-28
Method	ELECTRON MICROSCOPY 2.26 Å
Organisms	Canine parvovirus
Macromolecule	Capsid protein 2 (protein)

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7M3N \| pdb_00007m3n	Download File View File

Canine parvovirus and Fab14 asymmetric reconstruction

Goteschius, D.J., Hartmann, S.R., Hafenstein, S.L.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-07-28
Method	ELECTRON MICROSCOPY 2.4 Å
Organisms	Canine parvovirus Mus musculus
Macromolecule	CPV Fab14 heavy chain (protein) CPV Fab14 light chain (protein) Capsid protein 2 (protein)

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7M3O \| pdb_00007m3o	Download File View File

Canine parvovirus asymmetric map

Goteschius, D.J., Hartmann, S.R., Hafenstein, S.L.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-07-28
Method	ELECTRON MICROSCOPY 2.4 Å
Organisms	Canine parvovirus
Macromolecule	Capsid protein 2 (protein)

1 to 11 of 11 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3J6L | pdb_00003j6l

Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle

3J6M | pdb_00003j6m

Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle

3J6N | pdb_00003j6n

Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle

3J6O | pdb_00003j6o

Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle

3JCX | pdb_00003jcx

Canine Parvovirus complexed with Fab E

3JD7 | pdb_00003jd7

The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs

4QYK | pdb_00004qyk

Crystal structure of a canine parvovirus variant

7M3L | pdb_00007m3l

Canine parvovirus and Fab14 at partial occupancy

7M3M | pdb_00007m3m

Canine parvovirus and Fab14 at partial occupancy

7M3N | pdb_00007m3n

Canine parvovirus and Fab14 asymmetric reconstruction

7M3O | pdb_00007m3o

Canine parvovirus asymmetric map

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Symmetry Type

SCOP Classification

3J6L | pdb_00003j6l

3J6M | pdb_00003j6m

3J6N | pdb_00003j6n

3J6O | pdb_00003j6o

3JCX | pdb_00003jcx

3JD7 | pdb_00003jd7

4QYK | pdb_00004qyk

7M3L | pdb_00007m3l

7M3M | pdb_00007m3m

7M3N | pdb_00007m3n

7M3O | pdb_00007m3o