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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Miller, M."

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Search Summary

This query matches 87 Structures.

Refinements

Structure Determination Methodology

experimental (87)

Scientific Name of Source Organism

	Homo sapiens (28)
	HIV-1 M:B_HXB2R (10)
	Human immunodeficiency virus 1 (9)
	Bos taurus (7)
	Dickeya chrysanthemi (7)
	Mason-Pfizer monkey virus (6)
	Arabidopsis thaliana (4)
	Treponema denticola (4)
	synthetic construct (4)
	Xenotropic MuLV-related virus VP35 (3)

More...

Taxonomy

	Eukaryota (38)
	Riboviria (29)
	Bacteria (20)
	other sequences (4)

Experimental Method

	X-RAY DIFFRACTION (79)
	ELECTRON MICROSCOPY (5)
	SOLUTION NMR (3)
	NEUTRON DIFFRACTION (2)
	SOLID-STATE NMR (1)

Polymer Entity Type

	Protein (87)
	DNA (4)
	RNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (4)
	1.5 - 2.0 (24)
	2.0 - 2.5 (22)
	2.5 - 3.0 (20)
	3.0 - 3.5 (13)
	3.5 - 4.0 (1)
	> 4.5 (1)

Release Date

	1985 - 1989 (4)
	1990 - 1994 (10)
	1995 - 1999 (3)
	2000 - 2004 (8)
	2005 - 2009 (11)
	2010 - 2014 (9)
	2015 - 2019 (28)
	2020 - 2024 (13)
	2025 - 2029 (1)

Enzyme Classification Name

	Transferases (31)
	Hydrolases (36)
	Lyases (13)
	Oxidoreductases (3)

Symmetry Type

	Asymmetric (53)
	Cyclic (28)
	Dihedral (12)

SCOP Classification

	Alpha and beta proteins (a/b) (24)
	All beta proteins (12)
	Multi-domain proteins (alpha and beta) (10)
	All alpha proteins (3)
	Alpha and beta proteins (a+b) (8)
	Artifacts (11)
	Coiled coil proteins (1)
	Small proteins (1)

AllSelected

1 to 25 of 87 Structures

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1AGX \| pdb_00001agx	Download File View File

REFINED CRYSTAL STRUCTURE OF ACINETOBACTER GLUTAMINASIFICANS GLUTAMINASE-ASPARAGINASE

Lubkowski, J., Wlodawer, A., Housset, D., Weber, I.T., Ammon, H.L., Murphy, K.C., Swain, A.L.

(1994) Acta Crystallogr D Biol Crystallogr 50: 826-832

Released	1994-12-20
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Acinetobacter glutaminasificans
Macromolecule	GLUTAMINASE-ASPARAGINASE (protein)

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1HFJ \| pdb_00001hfj	Download File View File

Asparaginase from Erwinia chrysanthemi, hexagonal form with sulfate

Palm, G.J., Lubkowski, J., Kozak, M., Jaskolski, M., Wlodawer, A.

(2001) Acta Crystallogr D Biol Crystallogr 57: 369

Released	2000-12-07
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Dickeya chrysanthemi
Macromolecule	L-ASPARAGINE AMIDOHYDROLASE (protein)
Unique Ligands	SO4

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1HFK \| pdb_00001hfk	Download File View File

Asparaginase from Erwinia chrysanthemi, hexagonal form with weak sulfate

Lubkowski, J., Palm, G.J., Kozak, M., Jaskolski, M., Wlodawer, A.

(2001) Acta Crystallogr D Biol Crystallogr 57: 369

Released	2000-12-07
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Dickeya chrysanthemi
Macromolecule	L-ASPARAGINE AMIDOHYDROLASE (protein)
Unique Ligands	SO4

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1HFW \| pdb_00001hfw	Download File View File

X-ray structure of the complex between Erwinia chrysanthemi L-asparaginase and L-Glutamate

Lubkowski, J., Wlodawer, A., Kolyani, K.A.

(2001) Biochemistry 40: 5655

Released	2001-08-07
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Dickeya chrysanthemi
Macromolecule	L-ASPARAGINASE (protein)
Unique Ligands	GLU

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1HG0 \| pdb_00001hg0	Download File View File

X-ray structure of the complex between Erwinia chrysanthemi L-asparaginase and succinic acid

Lubkowski, J., Wlodawer, A., Kolyani, K.A.

(2001) Biochemistry 40: 5655

Released	2001-08-07
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Dickeya chrysanthemi
Macromolecule	L-ASPARAGINASE (protein)
Unique Ligands	SIN

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1HG1 \| pdb_00001hg1	Download File View File

X-ray structure of the complex between Erwinia chrysanthemi L-asparaginase and D-aspartate

Lubkowski, J., Wlodawer, A., Kolyani, K.A.

(2001) Biochemistry 40: 5655

Released	2001-08-07
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Dickeya chrysanthemi
Macromolecule	L-ASPARAGINASE (protein)
Unique Ligands	DAS

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1JSL \| pdb_00001jsl	Download File View File

Crystal structure of Erwinia chrysanthemi L-asparaginase complexed with 6-HYDROXY-D-NORLEUCINE

Aghaiypour, K., Wlodawer, A., Lubkowski, J.

(2001) Biochim Biophys Acta 1550: 117-128

Released	2002-01-09
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Dickeya chrysanthemi
Macromolecule	L-asparaginase (protein)
Unique Ligands	1PE, DDO, GOL

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1JSR \| pdb_00001jsr	Download File View File

CRYSTAL STRUCTURE OF ERWINIA CHRYSANTHEMI L-ASPARAGINASE COMPLEXED WITH 6-HYDROXY-L-NORLEUCINE

Aghaiypour, K., Wlodawer, A., Lubkowski, J.

(2001) Biochim Biophys Acta 1550: 117-128

Released	2002-01-09
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Dickeya chrysanthemi
Macromolecule	L-asparaginase (protein)
Unique Ligands	1PE, GOL, LDO

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1NWQ \| pdb_00001nwq	Download File View File

CRYSTAL STRUCTURE OF C/EBPALPHA-DNA COMPLEX

Miller, M., Shuman, J.D., Sebastian, T., Dauter, Z., Johnson, P.F.

(2003) J Biological Chem 278: 15178-15184

Released	2003-05-13
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Rattus norvegicus
Macromolecule	CCAAT/enhancer binding protein alpha (protein) 5'-D(APAPAPCPTPGPGPAPTPTPGPCPGPCPAPAPTPAPGPGPA)-3' (nucleic acid) 5'-D(TPTPCPCPTPAPTPTPGPCPGPCPAPAPTPCPCPAPGPTPT)-3' (nucleic acid)

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1RTA \| pdb_00001rta	Download File View File

CRYSTAL STRUCTURE DISPOSITION OF THYMIDYLIC ACID TETRAMER IN COMPLEX WITH RIBONUCLEASE A

Birdsall, D.L., McPherson, A.

(1992) J Biological Chem 267: 22230-22236

Released	1993-10-31
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bos taurus
Macromolecule	PROTEIN (RIBONUCLEASE A (E.C.3.1.27.5)) (protein) DNA (5'-D(TPTPTPT)-3') (nucleic acid)

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1RTB \| pdb_00001rtb	Download File View File

CRYSTAL STRUCTURE DISPOSITION OF THYMIDYLIC ACID TETRAMER IN COMPLEX WITH RIBONUCLEASE A

Birdsall, D.L., McPherson, A.

(1992) J Biological Chem 267: 22230-22236

Released	1993-10-31
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)

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1RUV \| pdb_00001ruv	Download File View File

RIBONUCLEASE A-URIDINE VANADATE COMPLEX: HIGH RESOLUTION RESOLUTION X-RAY STRUCTURE (1.3 A)

Ladner, J.E., Wladkowski, B., Svensson, L.A., Sjolin, L., Gilliland, G.L.

(1997) Acta Crystallogr D Biol Crystallogr 53: 290-301

Released	1997-04-01
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)
Unique Ligands	TBU, UVC

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2K37 \| pdb_00002k37	Download File View File

CsmA

Pedersen, M., Dittmer, J., Underhaug, J., Miller, M., Nielsen, N.C.

(2008) FEBS Lett 582: 2869-2874

Released	2008-09-02
Method	SOLUTION NMR
Organisms	Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS)
Macromolecule	Chlorosome Protein A (protein)

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2K8F \| pdb_00002k8f	Download File View File

Structural Basis for the Regulation of p53 Function by p300

Bai, Y., Feng, H., Jenkins, L.M., Durell, S.R., Wiodawer, A., Appella, E.

(2009) Structure 17: 202-210

Released	2009-03-03
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Cellular tumor antigen p53 (protein) Histone acetyltransferase p300 (protein)

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2RSP \| pdb_00002rsp	Download File View File

STRUCTURE OF THE ASPARTIC PROTEASE FROM ROUS SARCOMA RETROVIRUS REFINED AT 2 ANGSTROMS RESOLUTION

Wlodawer, A., Miller, M., Jaskolski, M.

(1990) Biochemistry 29: 5889-5898

Released	1989-10-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rous sarcoma virus
Macromolecule	RSV PROTEASE (protein)

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3C6T \| pdb_00003c6t	Download File View File

Crystal Structure of HIV Reverse Transcriptase in complex with inhibitor 14

Yan, Y., Prasad, S.

(2008) Bioorg Med Chem Lett 18: 2959-2966

Released	2008-04-22
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	HIV-1 M:B_HXB2R
Macromolecule	Reverse transcriptase (protein)
Unique Ligands	M14

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3C6U \| pdb_00003c6u	Download File View File

Crystal Structure of HIV Reverse Transcriptase in complex with inhibitor 22

Yan, Y., Prasad, S.

(2008) Bioorg Med Chem Lett 18: 2959-2966

Released	2008-04-22
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	HIV-1 M:B_HXB2R
Macromolecule	Reverse transcriptase (protein)
Unique Ligands	M22

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3DRP \| pdb_00003drp	Download File View File

HIV reverse transcriptase in complex with inhibitor R8e

Yan, Y., Prasad, S.

(2008) J Med Chem 51: 6503-6511

Released	2008-10-14
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	HIV-1 M:B_HXB2R
Macromolecule	Reverse transcriptase/ribonuclease H (protein) p51 RT (protein)
Unique Ligands	R8E

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3DRR \| pdb_00003drr	Download File View File

HIV reverse transcriptase Y181C mutant in complex with inhibitor R8e

Yan, Y.

(2008) J Med Chem 51: 6503-6511

Released	2008-10-14
Method	X-RAY DIFFRACTION 2.89 Å
Organisms	HIV-1 M:B_HXB2R
Macromolecule	Reverse transcriptase/ribonuclease H (protein) p51 RT (protein)
Unique Ligands	R8E

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3DRS \| pdb_00003drs	Download File View File

HIV reverse transcriptase K103N mutant in complex with inhibitor R8D

Yan, Y., Prasad, S.

(2008) J Med Chem 51: 6503-6511

Released	2008-10-14
Method	X-RAY DIFFRACTION 3.15 Å
Organisms	HIV-1 M:B_HXB2R
Macromolecule	Reverse transcriptase/ribonuclease H (protein) p66 RT (protein)
Unique Ligands	R8D

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3HVP \| pdb_00003hvp	Download File View File

CONSERVED FOLDING IN RETROVIRAL PROTEASES. CRYSTAL STRUCTURE OF A SYNTHETIC HIV-1 PROTEASE

Wlodawer, A., Jaskolski, M., Miller, M.

(1989) Science 245: 616-621

Released	1989-10-15
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	UNLIGANDED HIV-1 PROTEASE (protein)

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3I0R \| pdb_00003i0r	Download File View File

crystal structure of HIV reverse transcriptase in complex with inhibitor 3

Yan, Y., Prasad, S.

(2009) Bioorg Med Chem Lett 19: 5119-5123

Released	2009-08-25
Method	X-RAY DIFFRACTION 2.98 Å
Organisms	HIV-1 M:B_HXB2R
Macromolecule	Reverse transcriptase/ribonuclease H (protein) p51 RT (protein)
Unique Ligands	RT3

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3I0S \| pdb_00003i0s	Download File View File

crystal structure of HIV reverse transcriptase in complex with inhibitor 7

Yan, Y., Prasad, S.

(2009) Bioorg Med Chem Lett 19: 5119-5123

Released	2009-08-25
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	HIV-1 M:B_HXB2R
Macromolecule	Reverse transcriptase/ribonuclease H (protein) p51 RT (protein)
Unique Ligands	RT7