RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Kwong, P.D."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 579 Structures.

Refinements

Structure Determination Methodology

experimental (579)

Scientific Name of Source Organism

	Homo sapiens (387)
	Human immunodeficiency virus 1 (248)
	Severe acute respiratory syndrome coronavirus 2 (70)
	Mus musculus (51)
	Macaca mulatta (40)
	Plasmodium falciparum (16)
	Human respiratory syncytial virus A2 (14)
	Influenza A virus (14)
	synthetic construct (13)
	Lama glama (11)

More...

Taxonomy

	Eukaryota (498)
	Riboviria (433)
	Duplodnaviria (18)
	other sequences (13)
	Bacteria (8)
	Riboviria (RNA viruses and viroids) (4)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (400)
	ELECTRON MICROSCOPY (178)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (579)

Refinement Resolution (Å)

	1.0 - 1.5 (20)
	1.5 - 2.0 (83)
	2.0 - 2.5 (118)
	2.5 - 3.0 (112)
	3.0 - 3.5 (110)
	3.5 - 4.0 (80)
	4.0 - 4.5 (35)
	> 4.5 (20)

Release Date

	1995 - 1999 (8)
	2000 - 2004 (13)
	2005 - 2009 (25)
	2010 - 2014 (121)
	2015 - 2019 (148)
	2020 - 2024 (254)
	2025 - 2029 (10)

Enzyme Classification Name

	Hydrolases (21)
	Translocases (5)
	Lyases (2)

Membrane Protein Annotation

	mpstruc (13)
	MemProtMD (7)
	OPM (5)
	PDBTM (6)

Symmetry Type

	Asymmetric (402)
	Cyclic (182)
	Dihedral (2)
	Icosahedral (2)

SCOP Classification

	All beta proteins (200)
	Artifacts (38)
	Alpha and beta proteins (a+b) (28)
	Coiled coil proteins (5)
	Designed proteins (4)
	All alpha proteins (2)
	Alpha and beta proteins (a/b) (2)
	Small proteins (1)

AllSelected

1 to 25 of 579 Structures

Page 1 of 24

Sort by

Explore in 3D

1BUN \| pdb_00001bun	Download File View File

STRUCTURE OF BETA2-BUNGAROTOXIN: POTASSIUM CHANNEL BINDING BY KUNITZ MODULES AND TARGETED PHOSPHOLIPASE ACTION

Kwong, P.D., Mcdonald, N.Q., Sigler, P.B., Hendrickson, W.A.

(1995) Structure 3: 1109-1119

Released	1996-04-03
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Bungarus multicinctus
Macromolecule	BETA2-BUNGAROTOXIN (protein)
Unique Ligands	NA

Explore in 3D

1G9M \| pdb_00001g9m	Download File View File

HIV-1 HXBC2 GP120 ENVELOPE GLYCOPROTEIN COMPLEXED WITH CD4 AND INDUCED NEUTRALIZING ANTIBODY 17B

Kwong, P.D., Wyatt, R., Majeed, S., Robinson, J., Sweet, R.W., Sodroski, J., Hendrickson, W.A.

(2000) Structure 8: 1329-1339

Released	2000-12-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	ANTIBODY 17B, HEAVY CHAIN (protein) ANTIBODY 17B, LIGHT CHAIN (protein) ENVELOPE GLYCOPROTEIN GP120 (protein) T-CELL SURFACE GLYCOPROTEIN CD4 (protein)
Unique Ligands	IPA, NAG
Unique branched monosaccharides	FUC, NAG

Explore in 3D

1G9N \| pdb_00001g9n	Download File View File

HIV-1 YU2 GP120 ENVELOPE GLYCOPROTEIN COMPLEXED WITH CD4 AND INDUCED NEUTRALIZING ANTIBODY 17B

Kwong, P.D., Wyatt, R., Majeed, S., Robinson, J., Sweet, R.W., Sodroski, J., Hendrickson, W.A.

(2000) Structure 8: 1329-1339

Released	2000-12-27
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	ANTIBODY 17B, HEAVY CHAIN (protein) ANTIBODY 17B, LIGHT CHAIN (protein) ENVELOPE GLYCOPROTEIN GP120 (protein) T-CELL SURFACE GLYCOPROTEIN CD4 (protein)
Unique Ligands	NAG

Explore in 3D

1GC1 \| pdb_00001gc1	Download File View File

HIV-1 GP120 CORE COMPLEXED WITH CD4 AND A NEUTRALIZING HUMAN ANTIBODY

Kwong, P.D., Wyatt, R., Robinson, J., Sweet, R.W., Sodroski, J., Hendrickson, W.A.

(1998) Nature 393: 648-659

Released	1998-07-08
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	ANTIBODY 17B (protein) CD4 (protein) ENVELOPE PROTEIN GP120 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	FUC, NAG

Explore in 3D

1NCG \| pdb_00001ncg	Download File View File

STRUCTURAL BASIS OF CELL-CELL ADHESION BY CADHERINS

Shapiro, L., Fannon, A.M., Kwong, P.D., Thompson, A., Lehmann, M.S., Grubel, G., Legrand, J.-F., Als-Nielsen, J., Colman, D.R., Hendrickson, W.A.

(1995) Nature 374: 327-337

Released	1995-07-10
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mus musculus
Macromolecule	N-CADHERIN (protein)
Unique Ligands	YB

Explore in 3D

1NCH \| pdb_00001nch	Download File View File

STRUCTURAL BASIS OF CELL-CELL ADHESION BY CADHERINS

Shapiro, L., Fannon, A.M., Kwong, P.D., Thompson, A., Lehmann, M.S., Grubel, G., Legrand, J.-F., Als-Nielsen, J., Colman, D.R., Hendrickson, W.A.

(1995) Nature 374: 327-337

Released	1995-07-10
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mus musculus
Macromolecule	N-CADHERIN (protein)
Unique Ligands	YB

Explore in 3D

1NCI \| pdb_00001nci	Download File View File

STRUCTURAL BASIS OF CELL-CELL ADHESION BY CADHERINS

Shapiro, L., Fannon, A.M., Kwong, P.D., Thompson, A., Lehmann, M.S., Grubel, G., Legrand, J.-F., Als-Nielsen, J., Colman, D.R., Hendrickson, W.A.

(1995) Nature 374: 327-337

Released	1995-07-10
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mus musculus
Macromolecule	N-CADHERIN (protein)
Unique Ligands	IUM

Explore in 3D

1PS5 \| pdb_00001ps5	Download File View File

STRUCTURE OF THE MONOCLINIC C2 FORM OF HEN EGG-WHITE LYSOZYME AT 2.0 ANGSTROMS RESOLUTION

Majeed, S., Ofek, G., Belachew, A., Huang, C., Zhou, T., Kwong, P.D.

(2003) Structure 11: 1061-1070

Released	2003-09-09
Method	X-RAY DIFFRACTION 2 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	SO4

Explore in 3D

1RZ7 \| pdb_00001rz7	Download File View File

CRYSTAL STRUCTURE OF HUMAN ANTI-HIV-1 GP120-REACTIVE ANTIBODY 48D

Huang, C.C., Venturi, M., Majeed, S., Moore, M.J., Phogat, S., Zhang, M.-Y., Dimitrov, D.S., Hendrickson, W.A., Robinson, J., Sodroski, J., Wyatt, R., Choe, H., Farzan, M., Kwong, P.D.

(2004) Proc Natl Acad Sci U S A 101: 2706-2711

Released	2004-02-03
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Fab 48d heavy chain (protein) Fab 48d light chain (protein)
Unique Ligands	GOL

Explore in 3D

1RZ8 \| pdb_00001rz8	Download File View File

CRYSTAL STRUCTURE OF HUMAN ANTI-HIV-1 GP120-REACTIVE ANTIBODY 17B

Huang, C.C., Venturi, M., Majeed, S., Moore, M.J., Phogat, S., Zhang, M.-Y., Dimitrov, D.S., Hendrickson, W.A., Robinson, J., Sodroski, J., Wyatt, R., Choe, H., Farzan, M., Kwong, P.D.

(2004) Proc Natl Acad Sci U S A 101: 2706-2711

Released	2004-02-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Fab 17b heavy chain (protein) Fab 17b light chain (protein)

Explore in 3D

1RZF \| pdb_00001rzf	Download File View File

Crystal structure of Human anti-HIV-1 GP120-reactive antibody E51

Huang, C.C., Venturi, M., Majeed, S., Moore, M.J., Phogat, S., Zhang, M.-Y., Dimitrov, D.S., Hendrickson, W.A., Robinson, J., Sodroski, J., Wyatt, R., Choe, H., Farzan, M., Kwong, P.D.

(2004) Proc Natl Acad Sci U S A 101: 2706-2711

Released	2004-02-03
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Fab E51 heavy chain (protein) Fab E51 light chain (protein)
Unique Ligands	GOL, IPA

Explore in 3D

1RZG \| pdb_00001rzg	Download File View File

Crystal structure of Human anti-HIV-1 GP120 reactive antibody 412d

Huang, C.C., Venturi, M., Majeed, S., Moore, M.J., Phogat, S., Zhang, M.-Y., Dimitrov, D.S., Hendrickson, W.A., Robinson, J., Sodroski, J., Wyatt, R., Choe, H., Farzan, M., Kwong, P.D.

(2004) Proc Natl Acad Sci U S A 101: 2706-2711

Released	2004-02-03
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Fab 412d heavy chain (protein) Fab 412d light chain (protein)
Unique Ligands	ASP, CYS
Unique branched monosaccharides	FRU, GLC

Explore in 3D

1RZI \| pdb_00001rzi	Download File View File

Crystal structure of human anti-HIV-1 gp120-reactive antibody 47e fab

Huang, C.C., Venturi, M., Majeed, S., Moore, M.J., Phogat, S., Zhang, M.-Y., Dimitrov, D.S., Hendrickson, W.A., Robinson, J., Sodroski, J., Wyatt, R., Choe, H., Farzan, M., Kwong, P.D.

(2004) Proc Natl Acad Sci U S A 101: 2706-2711

Released	2004-02-03
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Fab 47e heavy chain (protein) Fab 47e light chain (protein)

Explore in 3D

1RZJ \| pdb_00001rzj	Download File View File

HIV-1 HXBC2 GP120 ENVELOPE GLYCOPROTEIN COMPLEXED WITH CD4 AND INDUCED NEUTRALIZING ANTIBODY 17B

Huang, C.C., Venturi, M., Majeed, S., Moore, M.J., Phogat, S., Zhang, M.-Y., Dimitrov, D.S., Hendrickson, W.A., Robinson, J., Sodroski, J., Wyatt, R., Choe, H., Farzan, M., Kwong, P.D.

(2004) Proc Natl Acad Sci U S A 101: 2706-2711

Released	2004-02-03
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	ANTIBODY 17B, HEAVY CHAIN (protein) ANTIBODY 17B, LIGHT CHAIN (protein) ENVELOPE GLYCOPROTEIN GP120 (protein) T-CELL SURFACE GLYCOPROTEIN CD4 (protein)
Unique Ligands	IPA, NAG
Unique branched monosaccharides	FUC, NAG

Explore in 3D

1RZK \| pdb_00001rzk	Download File View File

HIV-1 YU2 GP120 ENVELOPE GLYCOPROTEIN COMPLEXED WITH CD4 AND INDUCED NEUTRALIZING ANTIBODY 17B

Huang, C.C., Venturi, M., Majeed, S., Moore, M.J., Phogat, S., Zhang, M.-Y., Dimitrov, D.S., Hendrickson, W.A., Robinson, J., Sodroski, J., Wyatt, R., Choe, H., Farzan, M., Kwong, P.D.

(2004) Proc Natl Acad Sci U S A 101: 2706-2711

Released	2004-02-03
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	ANTIBODY 17B, HEAVY CHAIN (protein) ANTIBODY 17B, LIGHT CHAIN (protein) ENVELOPE GLYCOPROTEIN GP120 (protein) T-CELL SURFACE GLYCOPROTEIN CD4 (protein)
Unique Ligands	NAG

Explore in 3D

1TJG \| pdb_00001tjg	Download File View File

Crystal Structure of the broadly neutralizing anti-HIV-1 antibody 2F5 in complex with a gp41 7mer epitope

Ofek, G., Tang, M., Sambor, A., Katinger, H., Mascola, J.R., Wyatt, R., Kwong, P.D.

(2004) J Virol 78: 10724-10737

Released	2004-10-05
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens Human immunodeficiency virus type 1
Macromolecule	Envelope glycoprotein GP41 (protein) FAB 2F5 Heavy Chain (protein) FAB 2F5 Light Chain (protein)
Unique Ligands	EDO, IPA

Explore in 3D

1TJH \| pdb_00001tjh	Download File View File

Crystal Structure of the broadly neutralizing anti-HIV-1 antibody 2F5 in complex with a gp41 11mer epitope

Ofek, G., Tang, M., Sambor, A., Katinger, H., Mascola, J.R., Wyatt, R., Kwong, P.D.

(2004) J Virol 78: 10724-10737

Released	2004-10-05
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens Human immunodeficiency virus type 1 group M subtype D (isolate Z6)
Macromolecule	Envelope glycoprotein GP41 (protein) anti-HIV-1 antibody 2F5 Heavy Chain (protein) anti-HIV-1 antibody 2F5 Light Chain (protein)
Unique Ligands	EDO, IPA

Explore in 3D

1TJI \| pdb_00001tji	Download File View File

Crystal Structure of the broadly neutralizing anti-HIV-1 antibody 2F5 in complex with a gp41 17mer epitope

Ofek, G., Tang, M., Sambor, A., Katinger, H., Mascola, J.R., Wyatt, R., Kwong, P.D.

(2004) J Virol 78: 10724-10737

Released	2004-10-05
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Human immunodeficiency virus type 1 group M subtype D (isolate Z6)
Macromolecule	Envelope Glycoprotein GP41 (protein) anti-HIV-1 antibody 2F5 Heavy Chain (protein) anti-HIV-1 antibody 2F5 Light Chain (protein)
Unique Ligands	EDO, IPA

Explore in 3D

1WIO \| pdb_00001wio	Download File View File

STRUCTURE OF T-CELL SURFACE GLYCOPROTEIN CD4, TETRAGONAL CRYSTAL FORM

Wu, H., Kwong, P.D., Hendrickson, W.A.

(1997) Nature 387: 527-530

Released	1997-07-07
Method	X-RAY DIFFRACTION 3.9 Å
Organisms	Homo sapiens
Macromolecule	T-CELL SURFACE GLYCOPROTEIN CD4 (protein)

Explore in 3D

1WIP \| pdb_00001wip	Download File View File

STRUCTURE OF T-CELL SURFACE GLYCOPROTEIN CD4, MONOCLINIC CRYSTAL FORM

Wu, H., Kwong, P.D., Hendrickson, W.A.

(1997) Nature 387: 527-530

Released	1997-07-07
Method	X-RAY DIFFRACTION 4 Å
Organisms	Homo sapiens
Macromolecule	T-CELL SURFACE GLYCOPROTEIN CD4 (protein)

Explore in 3D

1WIQ \| pdb_00001wiq	Download File View File

STRUCTURE OF T-CELL SURFACE GLYCOPROTEIN CD4, TRIGONAL CRYSTAL FORM

Wu, H., Kwong, P.D., Hendrickson, W.A.

(1997) Nature 387: 527-530

Released	1997-07-07
Method	X-RAY DIFFRACTION 5 Å
Organisms	Homo sapiens
Macromolecule	T-CELL SURFACE GLYCOPROTEIN CD4 (protein)

Explore in 3D

1YYL \| pdb_00001yyl	Download File View File

crystal structure of CD4M33, a scorpion-toxin mimic of CD4, in complex with HIV-1 YU2 gp120 envelope glycoprotein and anti-HIV-1 antibody 17b

Huang, C.C., Stricher, F., Martin, L., Decker, J.M., Majeed, S., Barthe, P., Hendrickson, W.A., Robinson, J., Roumestand, C., Sodroski, J., Wyatt, R., Shaw, G.M., Vita, C., Kwong, P.D.

(2005) Structure 13: 755-768

Released	2005-05-03
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Homo sapiens Human immunodeficiency virus 1 synthetic construct
Macromolecule	CD4M33, scorpion-toxin mimic of CD4 (protein) Exterior membrane glycoprotein(GP120),Exterior membrane glycoprotein(GP120),Exterior membrane glycoprotein(GP120) (protein) antibody 17b heavy chain (protein) antibody 17b light chain (protein)
Unique Ligands	NAG

Explore in 3D

1YYM \| pdb_00001yym	Download File View File

crystal structure of F23, a scorpion-toxin mimic of CD4, in complex with HIV-1 YU2 gp120 envelope glycoprotein and anti-HIV-1 antibody 17b

Huang, C.C., Stricher, F., Martin, L., Decker, J.M., Majeed, S., Barthe, P., Hendrickson, W.A., Robinson, J., Roumestand, C., Sodroski, J., Wyatt, R., Shaw, G.M., Vita, C., Kwong, P.D.

(2005) Structure 13: 755-768

Released	2005-05-03
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Human immunodeficiency virus 1 synthetic construct
Macromolecule	Exterior membrane glycoprotein(GP120),Exterior membrane glycoprotein(GP120),Exterior membrane glycoprotein(GP120) (protein) F23, scorpion-toxin mimic of CD4 (protein) antibody 17b heavy chain (protein) antibody 17b light chain (protein)
Unique Ligands	EDO, IPA, NAG

Explore in 3D

2ADG \| pdb_00002adg	Download File View File

Crystal structure of monoclonal anti-CD4 antibody Q425

Zhou, T., Hamer, D.H., Hendrickson, W.A., Sattentau, Q.J., Kwong, P.D.

(2005) Proc Natl Acad Sci U S A 102: 14575-14580

Released	2005-09-20
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mus musculus
Macromolecule	Q425 Fab Light chain (protein) Q425 Fab heavy chain (protein)

Explore in 3D

2ADI \| pdb_00002adi	Download File View File

Crystal structure of monoclonal anti-CD4 antibody Q425 in complex with Barium

Zhou, T., Hamer, D.H., Hendrickson, W.A., Sattentau, Q.J., Kwong, P.D.

(2005) Proc Natl Acad Sci U S A 102: 14575-14580

Released	2005-09-20
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mus musculus
Macromolecule	Q425 Fab Heavy chain (protein) Q425 Fab Light chain (protein)
Unique Ligands	BA, TRS

1 to 25 of 579 Structures

Page 1 of 24

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1BUN | pdb_00001bun

1G9M | pdb_00001g9m

1G9N | pdb_00001g9n

1GC1 | pdb_00001gc1

1NCG | pdb_00001ncg

1NCH | pdb_00001nch

1NCI | pdb_00001nci

1PS5 | pdb_00001ps5

1RZ7 | pdb_00001rz7

1RZ8 | pdb_00001rz8

1RZF | pdb_00001rzf

1RZG | pdb_00001rzg

1RZI | pdb_00001rzi

1RZJ | pdb_00001rzj

1RZK | pdb_00001rzk

1TJG | pdb_00001tjg

1TJH | pdb_00001tjh

1TJI | pdb_00001tji

1WIO | pdb_00001wio

1WIP | pdb_00001wip

1WIQ | pdb_00001wiq

1YYL | pdb_00001yyl

1YYM | pdb_00001yym

2ADG | pdb_00002adg

2ADI | pdb_00002adi