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233,249 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Jowitt, T.A."

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Search Summary

This query matches 27 Structures.

Refinements

Structure Determination Methodology

experimental (27)

Scientific Name of Source Organism

	Mus musculus (10)
	Human papillomavirus 16 (8)
	Homo sapiens (6)
	Canine parvovirus (5)
	Enterovirus A71 (4)
	Coxsackievirus B3 (1)
	Rattus norvegicus (1)

Taxonomy

	Eukaryota (17)
	Monodnaviria (13)
	Riboviria (5)

Experimental Method

	ELECTRON MICROSCOPY (24)
	SOLUTION NMR (2)
	X-RAY DIFFRACTION (1)

Polymer Entity Type

Protein (27)

Refinement Resolution (Å)

	2.0 - 2.5 (3)
	3.0 - 3.5 (1)
	3.5 - 4.0 (2)
	4.0 - 4.5 (3)
	> 4.5 (16)

Release Date

	2010 - 2014 (14)
	2015 - 2019 (9)
	2020 - 2024 (4)

Membrane Protein Annotation

	MemProtMD (2)
	PDBTM (2)
	mpstruc (2)
	OPM (1)

Symmetry Type

	Icosahedral (22)
	Asymmetric (4)
	Cyclic (1)

SCOP Classification

All beta proteins (1)

AllSelected

1 to 25 of 27 Structures

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2M6B \| pdb_00002m6b	Download File View File

Structure of full-length transmembrane domains of human glycine receptor alpha1 monomer subunit

Mowrey, D., Cui, T., Jia, Y., Ma, D., Makhov, A.M., Zhang, P., Tang, P., Xu, Y.

(2013) Structure 21: 1897-1904

Released	2013-09-04
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Full-Length Transmembrane Domains of Human Glycine Receptor alpha1 Subunit (protein)

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2M6I \| pdb_00002m6i	Download File View File

Putative pentameric open-channel structure of full-length transmembrane domains of human glycine receptor alpha1 subunit

Mowrey, D., Cui, T., Jia, Y., Ma, D., Makhov, A.M., Zhang, P., Tang, P., Xu, Y.

(2013) Structure 21: 1897-1904

Released	2013-09-04
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Full-Length Transmembrane Domains of Human Glycine Receptor alpha1 Subunit (protein)

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3J22 \| pdb_00003j22	Download File View File

The Enterovirus 71 A-particle

Shingler, K.L.

(2013) PLoS Pathog 9: e1003240-e1003240

Released	2013-04-03
Method	ELECTRON MICROSCOPY 6.3 Å
Organisms	Enterovirus A71
Macromolecule	capsid protein VP0 (protein) capsid protein VP1 (protein) capsid protein VP3 (protein)

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3J23 \| pdb_00003j23	Download File View File

The Enterovirus 71 empty capsid

Shingler, K.L.

(2013) PLoS Pathog 9: e1003240-e1003240

Released	2013-04-03
Method	ELECTRON MICROSCOPY 9.2 Å
Organisms	Enterovirus A71
Macromolecule	capsid protein VP0 (protein) capsid protein VP1 (protein) capsid protein VP3 (protein)

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3J3Z \| pdb_00003j3z	Download File View File

Structure of MA28-7 neutralizing antibody Fab fragment from electron cryo-microscopy of enterovirus 71 complexed with a Fab fragment

Lee, H., Cifuente, J.O., Ashley, R.E., Conway, J.F., Makhov, A.M., Tano, Y., Shimizu, H., Nishimura, Y., Hafenstein, S.

(2013) J Virol 87: 11363-11370

Released	2013-08-28
Method	ELECTRON MICROSCOPY 23.4 Å
Organisms	Mus musculus
Macromolecule	MA28-7 neutralizing antibody heavy chain (protein) MA28-7 neutralizing antibody light chain (protein)

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3J6L \| pdb_00003j6l	Download File View File

Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle

Organtini, L.J., Makhov, A.M., Conway, J.F., Hafenstein, S., Carson, S.D.

(2014) J Virol 88: 5755-5765

Released	2014-04-09
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Homo sapiens
Macromolecule	Coxsackievirus and adenovirus receptor (protein)
Unique Ligands	SO4

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3J6M \| pdb_00003j6m	Download File View File

Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle

Organtini, L.J., Makhov, A.M., Conway, J.F., Hafenstein, S., Carson, S.D.

(2014) J Virol 88: 5755-5765

Released	2014-04-09
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Homo sapiens
Macromolecule	Coxsackievirus and adenovirus receptor (protein)

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3J6N \| pdb_00003j6n	Download File View File

Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle

Organtini, L.J., Makhov, A.M., Conway, J.F., Hafenstein, S., Carson, S.D.

(2014) J Virol 88: 5755-5765

Released	2014-04-09
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Homo sapiens
Macromolecule	Coxsackie and adenovirus receptor (protein)

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3J6O \| pdb_00003j6o	Download File View File

Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle

Organtini, L.J., Makhov, A.M., Conway, J.F., Hafenstein, S., Carson, S.D.

(2014) J Virol 88: 5755-5765

Released	2014-04-09
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Homo sapiens
Macromolecule	Coxsackie and adenovirus receptor (protein)

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3J7E \| pdb_00003j7e	Download File View File

Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments

Lee, H., Brendle, S.A., Bywaters, S.M., Christensen, N.D., Hafenstein, S.

(2015) J Virol 89: 1428-1438

Released	2014-11-26
Method	ELECTRON MICROSCOPY 13.6 Å
Organisms	Mus musculus
Macromolecule	H16.V5 Fab heavy chain (protein) H16.V5 Fab light chain (protein)

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3J7G \| pdb_00003j7g	Download File View File

Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments

Lee, H., Hafenstein, S.

(2015) J Virol 89: 1428-1438

Released	2014-11-26
Method	ELECTRON MICROSCOPY 13.6 Å
Organisms	Human papillomavirus 16
Macromolecule	L1 (protein)

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3J8V \| pdb_00003j8v	Download File View File

Cryo-EM reconstruction of quasi-HPV16 complex with H16.14J Fab

Guan, J., Hafenstein, S.

(2015) Virology 483: 253-263

Released	2015-05-06
Method	ELECTRON MICROSCOPY 13.9 Å
Organisms	Human papillomavirus 16 Mus musculus
Macromolecule	H16.14J heavy chain (protein) H16.14J light chain (protein) L1 (protein)

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3J8W \| pdb_00003j8w	Download File View File

Cryo-EM reconstruction of quasi-HPV16 complex with H263.A2 Fab

Guan, J., Hafenstein, S.

(2015) Virology 483: 253-263

Released	2015-05-06
Method	ELECTRON MICROSCOPY 13 Å
Organisms	Human papillomavirus 16 Mus musculus
Macromolecule	H263.A2 heavy chain (protein) H263.A2 light chain (protein) L1 (protein)

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3J8Z \| pdb_00003j8z	Download File View File

Cryo-EM reconstruction of quasi-HPV16 complex with H16.1A Fab

Guan, J., Hafenstein, S.

(2015) Virology 483: 253-263

Released	2015-05-06
Method	ELECTRON MICROSCOPY 14 Å
Organisms	Human papillomavirus 16 Mus musculus
Macromolecule	H16.1A heavy chain (protein) H16.1A light chain (protein) L1 (protein)

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3J91 \| pdb_00003j91	Download File View File

Cryo-electron microscopy of Enterovirus 71 (EV71) procapsid in complex with Fab fragments of neutralizing antibody 22A12

Shingler, K.L., Cifuente, J.O., Ashley, R.E., Makhov, A.M., Conway, J.F., Hafenstein, S.

(2015) J Virol 89: 1900-1908

Released	2014-12-10
Method	ELECTRON MICROSCOPY 8.8 Å
Organisms	Enterovirus A71
Macromolecule	VP0 (protein) VP1 (protein) VP3 (protein)

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3J93 \| pdb_00003j93	Download File View File

Fitting of Fab into the cryoEM density map of EV71 procapsid in complex with Fab22A12

Shingler, K.L., Cifuente, J.O., Ashley, R.E., Makhov, A.M., Conway, J.F., Hafenstein, S.

(2015) J Virol 89: 1900-1908

Released	2014-12-24
Method	ELECTRON MICROSCOPY 8.8 Å
Organisms	Mus musculus
Macromolecule	neutralizing antibody 22A12, heavy chain (protein) neutralizing antibody 22A12, light chain (protein)

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3JCX \| pdb_00003jcx	Download File View File

Canine Parvovirus complexed with Fab E

Organtini, L.J., Iketani, S., Huang, K., Ashley, R.E., Makhov, A.M., Conway, J.F., Parrish, C.R., Hafenstein, S.

(2016) J Virol 90: 9733-9742

Released	2016-07-20
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Canine parvovirus Rattus norvegicus
Macromolecule	Capsid protein 2 (protein) Fab E heavy chain (protein) Fab E light chain (protein)

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3JD7 \| pdb_00003jd7	Download File View File

The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs

Lee, H., Shingler, K.L., Organtini, L.J., Ashley, R.E., Makhov, A.M., Conway, J.F., Hafenstein, S.

(2016) Sci Adv 2: e1501929-e1501929

Released	2016-09-14
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Coxsackievirus B3
Macromolecule	Capsid protein VP1 (protein) Capsid protein VP2 (protein) Capsid protein VP3 (protein) Capsid protein VP4 (protein)
Unique Ligands	PLM

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4GMP \| pdb_00004gmp	Download File View File

Crystal structure of enterovirus 71 strain 1095 procapsid

Yoder, J.D., Hafenstein, S.

(2013) J Virol 87: 7637-7645

Released	2013-05-15
Method	X-RAY DIFFRACTION 3.9 Å
Organisms	Enterovirus A71
Macromolecule	capsid protein VP0 (protein) capsid protein VP1 (protein) capsid protein VP3 (protein)

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5KEP \| pdb_00005kep	Download File View File

High resolution cryo-EM maps of Human Papillomavirus 16 reveal L2 location and heparin-induced conformational changes

Guan, J., Bywaters, S.M., Brendle, S.A., Ashley, R.E., Makhov, A.M., Conway, J.F., Christensen, N.D., Hafenstein, S.

(2017) Structure 25: 253-263

Released	2017-01-25
Method	ELECTRON MICROSCOPY 4.3 Å
Organisms	Human papillomavirus 16
Macromolecule	Major capsid protein L1 (protein)

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5KEQ \| pdb_00005keq	Download File View File

High resolution cryo-EM maps of Human papillomavirus 16 reveal L2 location and heparin-induced conformational changes

Guan, J., Bywaters, S.M., Brendle, S.A., Ashley, R.E., Makhov, A.M., Conway, J.F., Christensen, N.D., Hafenstein, S.

(2017) Structure 25: 253-263

Released	2017-01-25
Method	ELECTRON MICROSCOPY 4.3 Å
Organisms	Human papillomavirus 16
Macromolecule	Major capsid protein L1 (protein)

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6BSP \| pdb_00006bsp	Download File View File

High-Resolution Structure Analysis of Antibody V5 and U4 Conformational Epitope on Human Papillomavirus 16

Guan, J., Bywaters, S.M., Brendle, S.A., Ashley, R.E., Makhov, A.M., Conway, J.F., Christenson, N.D., Hafenstein, S.

(2017) Viruses 9:

Released	2018-02-14
Method	ELECTRON MICROSCOPY 4.7 Å
Organisms	Human papillomavirus 16 Mus musculus
Macromolecule	Major capsid protein L1 (protein) U4 Heavy chain (protein) U4 Light chain (protein)

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6BT3 \| pdb_00006bt3	Download File View File

High-Resolution Structure Analysis of Antibody V5 Conformational Epitope on Human Papillomavirus 16

Guan, J., Bywaters, S.M., Brendle, S.A., Ashley, R.E., Makhov, A.M., Conway, J.F., Christensen, N.D., Hafenstein, S.

(2017) Viruses 9:

Released	2018-01-17
Method	ELECTRON MICROSCOPY 4.7 Å
Organisms	Human papillomavirus 16 Mus musculus
Macromolecule	Major capsid protein L1 (protein) V5 Fab Heavy-chain (protein) V5 Fab Light-chain (protein)

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7M3L \| pdb_00007m3l	Download File View File

Canine parvovirus and Fab14 at partial occupancy

Goteschius, D.J., Hartmann, S.R., Hafenstein, S.L.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-07-28
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Canine parvovirus Mus musculus
Macromolecule	Capsid protein 2 (protein) Fab14 Heavy Chain (protein) Fab14 Light Chain (protein)