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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Jaskolski, M."

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Search Summary

This query matches 261 Structures.

Refinements

Structure Determination Methodology

experimental (261)

Scientific Name of Source Organism

	Escherichia coli (23)
	Homo sapiens (22)
	Bos taurus (14)
	Lupinus luteus (14)
	Rhizobium etli (13)
	Medicago truncatula (11)
	synthetic construct (11)
	Arabidopsis thaliana (10)
	Escherichia coli K-12 (9)
	Klebsiella pneumoniae (8)

More...

Taxonomy

	Eukaryota (124)
	Bacteria (106)
	Riboviria (22)
	other sequences (11)

Experimental Method

	X-RAY DIFFRACTION (259)
	ELECTRON MICROSCOPY (1)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (252)
	DNA (10)
	NA-hybrid (1)
	RNA (1)

Refinement Resolution (Å)

	0.5 - 1.0 (14)
	1.0 - 1.5 (42)
	1.5 - 2.0 (121)
	2.0 - 2.5 (54)
	2.5 - 3.0 (27)
	3.0 - 3.5 (2)

Release Date

	1985 - 1989 (2)
	1990 - 1994 (7)
	1995 - 1999 (16)
	2000 - 2004 (20)
	2005 - 2009 (29)
	2010 - 2014 (49)
	2015 - 2019 (69)
	2020 - 2024 (66)
	2025 - 2029 (3)

Enzyme Classification Name

	Hydrolases (125)
	Transferases (22)
	Oxidoreductases (13)
	Lyases (5)
	Isomerases (1)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Asymmetric (101)
	Cyclic (112)
	Dihedral (58)

SCOP Classification

	Alpha and beta proteins (a+b) (51)
	Alpha and beta proteins (a/b) (40)
	All beta proteins (28)
	Artifacts (19)
	Multi-domain proteins (alpha and beta) (14)
	All alpha proteins (16)
	Small proteins (9)

AllSelected

1 to 25 of 261 Structures

Page 1 of 11

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1AGX \| pdb_00001agx	Download File View File

REFINED CRYSTAL STRUCTURE OF ACINETOBACTER GLUTAMINASIFICANS GLUTAMINASE-ASPARAGINASE

Lubkowski, J., Wlodawer, A., Housset, D., Weber, I.T., Ammon, H.L., Murphy, K.C., Swain, A.L.

(1994) Acta Crystallogr D Biol Crystallogr 50: 826-832

Released	1994-12-20
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Acinetobacter glutaminasificans
Macromolecule	GLUTAMINASE-ASPARAGINASE (protein)

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1ASU \| pdb_00001asu	Download File View File

AVIAN SARCOMA VIRUS INTEGRASE CATALYTIC CORE DOMAIN CRYSTALLIZED FROM 2% PEG 400, 2M AMMONIUM SULFATE, HEPES PH 7.5

Bujacz, G., Jaskolski, M., Alexandratos, J., Wlodawer, A.

(1995) J Mol Biology 253: 333-346

Released	1995-11-14
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Avian sarcoma virus
Macromolecule	AVIAN SARCOMA VIRUS INTEGRASE (protein)
Unique Ligands	EPE

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1ASV \| pdb_00001asv	Download File View File

Avian sarcoma virus integrase catalytic core domain

Bujacz, G., Jaskolski, M., Alexandratos, J., Wlodawer, A.

(1995) J Mol Biology 253: 333-346

Released	1995-11-14
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Avian sarcoma virus
Macromolecule	AVIAN SARCOMA VIRUS INTEGRASE (protein)

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1ASW \| pdb_00001asw	Download File View File

AVIAN SARCOMA VIRUS INTEGRASE CATALYTIC CORE DOMAIN CRYSTALLIZED FROM 20% PEG 4000, 10% ISOPROPANOL, HEPES PH 7.5 USING SELENOMETHIONINE SUBSTITUTED PROTEIN; DATA COLLECTED AT-165 DEGREES C

Bujacz, G., Jaskolski, M., Alexandratos, J., Wlodawer, A.

(1995) J Mol Biology 253: 333-346

Released	1995-11-14
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Avian sarcoma virus
Macromolecule	AVIAN SARCOMA VIRUS INTEGRASE (protein)
Unique Ligands	EPE, IPA

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1CXU \| pdb_00001cxu	Download File View File

1.42A RESOLUTION ASV INTEGRASE CORE DOMAIN FROM CITRATE

Lubkowski, J., Dauter, Z., Yang, F., Alexandratos, J., Wlodawer, A.

(1999) Biochemistry 38: 13512-13522

Released	1999-09-08
Method	X-RAY DIFFRACTION 1.42 Å
Organisms	Avian sarcoma virus
Macromolecule	PROTEIN (AVIAN SARCOMA VIRUS INTEGRASE) (protein)
Unique Ligands	CIT, GOL

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1G6X \| pdb_00001g6x	Download File View File

ULTRA HIGH RESOLUTION STRUCTURE OF BOVINE PANCREATIC TRYPSIN INHIBITOR (BPTI) MUTANT WITH ALTERED BINDING LOOP SEQUENCE

Addlagatta, A., Czapinska, H., Krzywda, S., Otlewski, J., Jaskolski, M.

(2001) Acta Crystallogr D Biol Crystallogr 57: 649-663

Released	2001-05-09
Method	X-RAY DIFFRACTION 0.86 Å
Organisms	Bos taurus
Macromolecule	PANCREATIC TRYPSIN INHIBITOR (protein)
Unique Ligands	EDO, SO4

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1G96 \| pdb_00001g96	Download File View File

HUMAN CYSTATIN C; DIMERIC FORM WITH 3D DOMAIN SWAPPING

Janowski, R., Kozak, M., Jankowska, E., Grzonka, Z., Grubb, A., Abrahamson, M., Jaskolski, M.

(2001) Nat Struct Biol 8: 316-320

Released	2001-04-06
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	CYSTATIN C (protein)
Unique Ligands	CL, GOL

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1HFJ \| pdb_00001hfj	Download File View File

Asparaginase from Erwinia chrysanthemi, hexagonal form with sulfate

Palm, G.J., Lubkowski, J., Kozak, M., Jaskolski, M., Wlodawer, A.

(2001) Acta Crystallogr D Biol Crystallogr 57: 369

Released	2000-12-07
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Dickeya chrysanthemi
Macromolecule	L-ASPARAGINE AMIDOHYDROLASE (protein)
Unique Ligands	SO4

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1HFK \| pdb_00001hfk	Download File View File

Asparaginase from Erwinia chrysanthemi, hexagonal form with weak sulfate

Lubkowski, J., Palm, G.J., Kozak, M., Jaskolski, M., Wlodawer, A.

(2001) Acta Crystallogr D Biol Crystallogr 57: 369

Released	2000-12-07
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Dickeya chrysanthemi
Macromolecule	L-ASPARAGINE AMIDOHYDROLASE (protein)
Unique Ligands	SO4

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1HFW \| pdb_00001hfw	Download File View File

X-ray structure of the complex between Erwinia chrysanthemi L-asparaginase and L-Glutamate

Lubkowski, J., Wlodawer, A., Kolyani, K.A.

(2001) Biochemistry 40: 5655

Released	2001-08-07
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Dickeya chrysanthemi
Macromolecule	L-ASPARAGINASE (protein)
Unique Ligands	GLU

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1HG0 \| pdb_00001hg0	Download File View File

X-ray structure of the complex between Erwinia chrysanthemi L-asparaginase and succinic acid

Lubkowski, J., Wlodawer, A., Kolyani, K.A.

(2001) Biochemistry 40: 5655

Released	2001-08-07
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Dickeya chrysanthemi
Macromolecule	L-ASPARAGINASE (protein)
Unique Ligands	SIN

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1HG1 \| pdb_00001hg1	Download File View File

X-ray structure of the complex between Erwinia chrysanthemi L-asparaginase and D-aspartate

Lubkowski, J., Wlodawer, A., Kolyani, K.A.

(2001) Biochemistry 40: 5655

Released	2001-08-07
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Dickeya chrysanthemi
Macromolecule	L-ASPARAGINASE (protein)
Unique Ligands	DAS

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1HO3 \| pdb_00001ho3	Download File View File

CRYSTAL STRUCTURE ANALYSIS OF E. COLI L-ASPARAGINASE II (Y25F MUTANT)

Jaskolski, M., Kozak, M., Lubkowski, P., Palm, J.G., Wlodawer, A.

(2001) Acta Crystallogr D Biol Crystallogr 57: 369-377

Released	2001-03-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	L-ASPARAGINASE II (protein)
Unique Ligands	ASP

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1ICX \| pdb_00001icx	Download File View File

CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN LLPR10.1A FROM YELLOW LUPINE

Biesiadka, J., Bujacz, G., Sikorski, M.M., Jaskolski, M.

(2002) J Mol Biology 319: 1223-1234

Released	2002-07-10
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Lupinus luteus
Macromolecule	PROTEIN LLR18A (protein)

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1IFV \| pdb_00001ifv	Download File View File

CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN LLPR10.1B FROM YELLOW LUPINE

Biesiadka, J., Bujacz, G., Sikorski, M.M., Jaskolski, M.

(2002) J Mol Biology 319: 1223-1234

Released	2002-07-10
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Lupinus luteus
Macromolecule	PROTEIN LLR18B (protein)

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1IHD \| pdb_00001ihd	Download File View File

Crystal Structure of Trigonal Form of D90E Mutant of Escherichia coli Asparaginase II

Borek, D., Jaskolski, M.

(2014) FEBS J 281: 4097-4111

Released	2003-09-09
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Escherichia coli
Macromolecule	L-asparaginase II (protein)

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1JAZ \| pdb_00001jaz	Download File View File

Crystal Structure of Monoclinic Form of D90E Mutant of Escherichia coli Asparaginase II

Borek, D., Kozak, M., Jaskolski, M.

(2014) FEBS J 281: 4097-4111

Released	2003-09-09
Method	X-RAY DIFFRACTION 2.27 Å
Organisms	Escherichia coli
Macromolecule	L-ASPARAGINASE II (protein)
Unique Ligands	ZN

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1JJA \| pdb_00001jja	Download File View File

CRYSTAL STRUCTURE OF ORTHORHOMBIC FORM OF D90E MUTANT OF ESCHERICHIA COLI L-ASPARAGINASE II

Borek, D., Kozak, M., Jaskolski, M.

(2014) FEBS J 281: 4097-4111

Released	2003-09-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	L-ASPARAGINASE II (protein)

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1JN9 \| pdb_00001jn9	Download File View File

Structure of Putative Asparaginase Encoded by Escherichia coli ybiK Gene

Borek, D., Jaskolski, M.

(2008) Acta Crystallogr D Biol Crystallogr 64: 309-320

Released	2003-09-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	PUTATIVE L-ASPARAGINASE (protein)
Unique Ligands	CA, CL, NA

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1K2X \| pdb_00001k2x	Download File View File

Crystal structure of putative asparaginase encoded by Escherichia coli ybiK gene

Borek, D., Jaskolski, M.

(2008) Acta Crystallogr D Biol Crystallogr 64: 309-320

Released	2003-09-09
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Escherichia coli
Macromolecule	Putative L-asparaginase (protein)
Unique Ligands	CL, NA

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1KHP \| pdb_00001khp	Download File View File

Monoclinic form of papain/ZLFG-DAM covalent complex

Janowski, R., Kozak, M., Jankowska, E., Grzonka, Z., Jaskolski, M.

(2004) J Pept Res 64: 141-150

Released	2003-09-09
Method	X-RAY DIFFRACTION 2 Å
Organisms	Carica papaya
Macromolecule	Papain (protein) peptidic inhibitor (protein)

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1KHQ \| pdb_00001khq	Download File View File

ORTHORHOMBIC FORM OF PAPAIN/ZLFG-DAM COVALENT COMPLEX

Janowski, R., Kozak, M., Jankowska, E., Grzonka, Z., Jaskolski, M.

(2004) J Pept Res 64: 141-150

Released	2003-09-09
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Carica papaya
Macromolecule	Papain (protein) peptidic inhibitor (protein)

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1LU0 \| pdb_00001lu0	Download File View File

Atomic Resolution Structure of Squash Trypsin Inhibitor: Unexpected Metal Coordination

Thaimattam, R., Tykarska, E., Bierzynski, A., Sheldrick, G.M., Jaskolski, M.

(2002) Acta Crystallogr D Biol Crystallogr 58: 1448-1461

Released	2002-08-28
Method	X-RAY DIFFRACTION 1.03 Å
Organisms	Cucurbita maxima
Macromolecule	Trypsin inhibitor I (protein)
Unique Ligands	GOL, MRD, SO4, ZN

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1M6C \| pdb_00001m6c	Download File View File

V68N MYOGLOBIN WITH CO

Murshudov, G.N., Krzywda, S., Brzozowski, A.M., Jaskolski, M., Scott, E.E., Klizas, S.A., Gibson, Q.H., Olson, J.S., Wilkinson, A.J.

(1998) Biochemistry 37: 15896-15907

Released	1998-08-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Sus scrofa
Macromolecule	PROTEIN (MYOGLOBIN) (protein)
Unique Ligands	CMO, HEM

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1M6M \| pdb_00001m6m	Download File View File

V68N MET MYOGLOBIN

Murshudov, G.N., Krzywda, S., Brzozowski, A.M., Jaskolski, M., Scott, E.E., Klizas, S.A., Gibson, Q.H., Olson, J.S., Wilkinson, A.J.

(1998) Biochemistry 37: 15896-15907

Released	1998-08-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Sus scrofa
Macromolecule	PROTEIN (MYOGLOBIN) (protein)
Unique Ligands	HEM

1 to 25 of 261 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1AGX | pdb_00001agx

1ASU | pdb_00001asu

1ASV | pdb_00001asv

1ASW | pdb_00001asw

1CXU | pdb_00001cxu

1G6X | pdb_00001g6x

1G96 | pdb_00001g96

1HFJ | pdb_00001hfj

1HFK | pdb_00001hfk

1HFW | pdb_00001hfw

1HG0 | pdb_00001hg0

1HG1 | pdb_00001hg1

1HO3 | pdb_00001ho3

1ICX | pdb_00001icx

1IFV | pdb_00001ifv

1IHD | pdb_00001ihd

1JAZ | pdb_00001jaz

1JJA | pdb_00001jja

1JN9 | pdb_00001jn9

1K2X | pdb_00001k2x

1KHP | pdb_00001khp

1KHQ | pdb_00001khq

1LU0 | pdb_00001lu0

1M6C | pdb_00001m6c

1M6M | pdb_00001m6m