RCSB PDB: Search

3MOR \| pdb_00003mor	Download File View File

Crystal structure of Cathepsin B from Trypanosoma Brucei

Cupelli, K., Stehle, T.

(2012) Nat Methods 9: 259-262

Released	2011-11-02
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Trypanosoma brucei
Macromolecule	Cathepsin B-like cysteine protease (protein)
Unique Ligands	CL, GOL, NA
Unique branched monosaccharides	NAG

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3PCQ \| pdb_00003pcq	Download File View File

Femtosecond X-ray protein Nanocrystallography

Chapman, H.N., Fromme, P., Barty, A., White, T.A., Kirian, R.A., Aquila, A., Hunter, M.S., Schulz, J., Deponte, D.P., Weierstall, U., Doak, R.B., Maia, F.R.N.C., Martin, A.V., Schlichting, I., Lomb, L., Coppola, N., Shoeman, R.L., Epp, S.W., Hartmann, R., Rolles, D., Rudenko, A., Foucar, L., Kimmel, N., Weidenspointner, G., Holl, P., Liang, M., Barthelmess, M., Caleman, C., Boutet, S., Bogan, M.J., Krzywinski, J., Bostedt, C., Bajt, S., Gumprecht, L., Rudek, B., Erk, B., Schmidt, C., Homke, A., Reich, C., Pietschner, D., Struder, L., Hauser, G., Gorke, H., Ullrich, J., Herrmann, S., Schaller, G., Schopper, F., Soltau, H., Kuhnel, K.-U., Messerschmidt, M., Bozek, J.D., Hau-Riege, S.P., Frank, M., Hampton, C.Y., Sierra, R., Starodub, D., Williams, G.J., Hajdu, J., Timneanu, N., Seibert, M.M., Andreasson, J., Rocker, A., Jonsson, O., Svenda, M., Stern, S., Nass, K., Andritschke, R., Schroter, C.-D., Krasniqi, F., Bott, M., Schmidt, K.E., Wang, X., Grotjohann, I., Holton, J.M., Barends, T.R.M., Neutze, R., Marchesini, S., Fromme, R., Schorb, S., Rupp, D., Adolph, M., Gorkhover, T., Andersson, I., Hirsemann, H., Potdevin, G., Graafsma, H., Nilsson, B., Spence, J.C.H.

(2011) Nature 470: 73-77

Released	2011-02-02
Method	X-RAY DIFFRACTION 8.984 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Unique protein chains: 12
Unique Ligands	BCR, CA, CLA, LHG, LMG, PQN, SF4

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4AC5 \| pdb_00004ac5	Download File View File

Lipidic sponge phase crystal structure of the Bl. viridis reaction centre solved using serial femtosecond crystallography

Johansson, L.C., Arnlund, D., White, T.A., Katona, G., DePonte, D.P., Weierstall, U., Doak, R.B., Shoeman, R.L., Lomb, L., Malmerberg, E., Davidsson, J., Nass, K., Liang, M., Andreasson, J., Aquila, A., Bajt, S., Barthelmess, M., Barty, A., Bogan, M.J., Bostedt, C., Bozek, J.D., Caleman, C., Coffee, R., Coppola, N., Ekeberg, T., Epp, S.W., Erk, B., Fleckenstein, H., Foucar, L., Graafsma, H., Gumprecht, L., Hajdu, J., Hampton, C.Y., Hartmann, R., Hartmann, A., Hauser, G., Hirsemann, H., Holl, P., Hunter, M.S., Kassemeyer, S., Kimmel, N., Kirian, R.A., Maia, F.R.N.C., Marchesini, S., Martin, A.V., Reich, C., Rolles, D., Rudek, B., Rudenko, A., Schlichting, I., Schulz, J., Seibert, M.M., Sierra, R., Soltau, H., Starodub, D., Stellato, F., Stern, S., Struder, L., Timneanu, N., Ullrich, J., Wahlgren, W.Y., Wang, X., Weidenspointner, G., Wunderer, C., Fromme, P., Chapman, H.N., Spence, J.C.H., Neutze, R.

(2012) Nat Methods 9: 263

Released	2012-02-15
Method	X-RAY DIFFRACTION 8.2 Å
Organisms	Blastochloris viridis
Macromolecule	PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT (protein) REACTION CENTER PROTEIN H CHAIN (protein) REACTION CENTER PROTEIN L CHAIN (protein) REACTION CENTER PROTEIN M CHAIN (protein)
Unique Ligands	BCB, BPB, FE2, HEM, MQ7, NS5

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4CAS \| pdb_00004cas	Download File View File

Serial femtosecond crystallography structure of a photosynthetic reaction center

Johansson, L.C., Arnlund, D., Katona, G., White, T.A., Barty, A., DePonte, D.P., Shoeman, R.L., Wickstrand, C., Sharma, A., Williams, G.J., Aquila, A., Bogan, M.J., Caleman, C., Davidsson, J., Doak, R.B., Frank, M., Fromme, R., Galli, L., Grotjohann, I., Hunter, M.S., Kassemeyer, S., Kirian, R.A., Kupitz, C., Liang, M., Lomb, L., Malmerberg, E., Martin, A.V., Messerschmidt, M., Nass, K., Redecke, L., Seibert, M.M., Sjohamn, J., Steinbrener, J., Stellato, F., Wang, D., Wahlgren, W.Y., Weierstall, U., Westenhoff, S., Zatsepin, N.A., Boutet, S., Spence, J.C.H., Schlichting, I., Chapman, H.N., Fromme, P., Neutze, R.

(2013) Nat Commun 4: 2911-2911

Released	2013-12-25
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Blastochloris viridis
Macromolecule	PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT (protein) REACTION CENTER PROTEIN H CHAIN (protein) REACTION CENTER PROTEIN L CHAIN (protein) REACTION CENTER PROTEIN M CHAIN (protein)
Unique Ligands	BCL, BPB, DGA, FE2, HEC, MPG, MQ7, NS5, OTP, PO4

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4ET8 \| pdb_00004et8	Download File View File

Hen egg-white lysozyme solved from 40 fs free-electron laser pulse data

Boutet, S., Lomb, L., Williams, G., Barends, T., Aquila, A., Doak, R.B., Weierstall, U., DePonte, D., Steinbrener, J., Shoeman, R., Messerschmidt, M., Barty, A., White, T., Kassemeyer, S., Kirian, R., Seibert, M., Montanez, P., Kenney, C., Herbst, R., Hart, P., Pines, J., Haller, G., Gruner, S., Philllip, H., Tate, M., Hromalik, M., Koerner, L., van Bakel, N., Morse, J., Ghonsalves, W., Arnlund, D., Bogan, M., Calemann, C., Fromme, R., Hampton, C., Hunter, M., Johansson, L., Katona, G., Kupitz, C., Liang, M., Martin, A., Nass, K., Redecke, L., Stellato, F., Timneanu, N., Wang, D., Zatsepin, N., Schafer, D., Defever, K., Neutze, R., Fromme, P., Spence, J., Chapman, H., Schlichting, I.

(2012) Science 337: 362-364

Released	2012-06-13
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	CL, NA

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4ET9 \| pdb_00004et9	Download File View File

Hen egg-white lysozyme solved from 5 fs free-electron laser pulse data

Boutet, S., Lomb, L., Williams, G., Barends, T., Aquila, A., Doak, R.B., Weierstall, U., DePonte, D., Steinbrener, J., Shoeman, R., Messerschmidt, M., Barty, A., White, T., Kassemeyer, S., Kirian, R., Seibert, M., Montanez, P., Kenney, C., Herbst, R., Hart, P., Pines, J., Haller, G., Gruner, S., Philllip, H., Tate, M., Hromalik, M., Koerner, L., van Bakel, N., Morse, J., Ghonsalves, W., Arnlund, D., Bogan, M., Calemann, C., Fromme, R., Hampton, C., Hunter, M., Johansson, L., Katona, G., Kupitz, C., Liang, M., Martin, A., Nass, K., Redecke, L., Stellato, F., Timneanu, N., Wang, D., Zatsepin, N., Schafer, D., Defever, K., Neutze, R., Fromme, P., Spence, J., Chapman, H., Schlichting, I.

(2012) Science 337: 362-364

Released	2012-06-13
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	CL, NA

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4ETA \| pdb_00004eta	Download File View File

Lysozyme, room temperature, 400 kGy dose

Boutet, S., Lomb, L., Williams, G., Barends, T., Aquila, A., Doak, R.B., Weierstall, U., DePonte, D., Steinbrener, J., Shoeman, R., Messerschmidt, M., Barty, A., White, T., Kassemeyer, S., Kirian, R., Seibert, M., Montanez, P., Kenney, C., Herbst, R., Hart, P., Pines, J., Haller, G., Gruner, S., Philllip, H., Tate, M., Hromalik, M., Koerner, L., van Bakel, N., Morse, J., Ghonsalves, W., Arnlund, D., Bogan, M., Calemann, C., Fromme, R., Hampton, C., Hunter, M., Johansson, L., Katona, G., Kupitz, C., Liang, M., Martin, A., Nass, K., Redecke, L., Stellato, F., Timneanu, N., Wang, D., Zatsepin, N., Schafer, D., Defever, K., Neutze, R., Fromme, P., Spence, J., Chapman, H., Schlichting, I.

(2012) Science 337: 362-364

Released	2012-06-13
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	CL

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4ETB \| pdb_00004etb	Download File View File

lysozyme, room temperature, 200 kGy dose

Boutet, S., Lomb, L., Williams, G., Barends, T., Aquila, A., Doak, R.B., Weierstall, U., DePonte, D., Steinbrener, J., Shoeman, R., Messerschmidt, M., Barty, A., White, T., Kassemeyer, S., Kirian, R., Seibert, M., Montanez, P., Kenney, C., Herbst, R., Hart, P., Pines, J., Haller, G., Gruner, S., Philllip, H., Tate, M., Hromalik, M., Koerner, L., van Bakel, N., Morse, J., Ghonsalves, W., Arnlund, D., Bogan, M., Calemann, C., Fromme, R., Hampton, C., Hunter, M., Johansson, L., Katona, G., Kupitz, C., Liang, M., Martin, A., Nass, K., Redecke, L., Stellato, F., Timneanu, N., Wang, D., Zatsepin, N., Schafer, D., Defever, K., Neutze, R., Fromme, P., Spence, J., Chapman, H., Schlichting, I.

(2012) Science 337: 362-364

Released	2012-06-13
Method	X-RAY DIFFRACTION 1.908 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	CL

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4ETC \| pdb_00004etc	Download File View File

Lysozyme, room temperature, 24 kGy dose

Boutet, S., Lomb, L., Williams, G., Barends, T., Aquila, A., Doak, R.B., Weierstall, U., DePonte, D., Steinbrener, J., Shoeman, R., Messerschmidt, M., Barty, A., White, T., Kassemeyer, S., Kirian, R., Seibert, M., Montanez, P., Kenney, C., Herbst, R., Hart, P., Pines, J., Haller, G., Gruner, S., Philllip, H., Tate, M., Hromalik, M., Koerner, L., van Bakel, N., Morse, J., Ghonsalves, W., Arnlund, D., Bogan, M., Calemann, C., Fromme, R., Hampton, C., Hunter, M., Johansson, L., Katona, G., Kupitz, C., Liang, M., Martin, A., Nass, K., Redecke, L., Stellato, F., Timneanu, N., Wang, D., Zatsepin, N., Schafer, D., Defever, K., Neutze, R., Fromme, P., Spence, J., Chapman, H., Schlichting, I.

(2012) Science 337: 362-364

Released	2012-06-13
Method	X-RAY DIFFRACTION 1.906 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	CL, NA

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4ETD \| pdb_00004etd	Download File View File

Lysozyme, room-temperature, rotating anode, 0.0026 MGy

Boutet, S., Lomb, L., Williams, G., Barends, T., Aquila, A., Doak, R.B., Weierstall, U., DePonte, D., Steinbrener, J., Shoeman, R., Messerschmidt, M., Barty, A., White, T., Kassemeyer, S., Kirian, R., Seibert, M., Montanez, P., Kenney, C., Herbst, R., Hart, P., Pines, J., Haller, G., Gruner, S., Philllip, H., Tate, M., Hromalik, M., Koerner, L., van Bakel, N., Morse, J., Ghonsalves, W., Arnlund, D., Bogan, M., Calemann, C., Fromme, R., Hampton, C., Hunter, M., Johansson, L., Katona, G., Kupitz, C., Liang, M., Martin, A., Nass, K., Redecke, L., Stellato, F., Timneanu, N., Wang, D., Zatsepin, N., Schafer, D., Defever, K., Neutze, R., Fromme, P., Spence, J., Chapman, H., Schlichting, I.

(2012) Science 337: 362-364

Released	2012-06-13
Method	X-RAY DIFFRACTION 1.904 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	CL

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4ETE \| pdb_00004ete	Download File View File

Lysozyme, room-temperature, rotating anode, 0.0021 MGy

Boutet, S., Lomb, L., Williams, G., Barends, T., Aquila, A., Doak, R.B., Weierstall, U., DePonte, D., Steinbrener, J., Shoeman, R., Messerschmidt, M., Barty, A., White, T., Kassemeyer, S., Kirian, R., Seibert, M., Montanez, P., Kenney, C., Herbst, R., Hart, P., Pines, J., Haller, G., Gruner, S., Philllip, H., Tate, M., Hromalik, M., Koerner, L., van Bakel, N., Morse, J., Ghonsalves, W., Arnlund, D., Bogan, M., Calemann, C., Fromme, R., Hampton, C., Hunter, M., Johansson, L., Katona, G., Kupitz, C., Liang, M., Martin, A., Nass, K., Redecke, L., Stellato, F., Timneanu, N., Wang, D., Zatsepin, N., Schafer, D., Defever, K., Neutze, R., Fromme, P., Spence, J., Chapman, H., Schlichting, I.

(2012) Science 337: 362-364

Released	2012-06-13
Method	X-RAY DIFFRACTION 1.905 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	CL

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4FE1 \| pdb_00004fe1	Download File View File

Improving the Accuracy of Macromolecular Structure Refinement at 7 A Resolution

Fromme, R., Adams, P.D., Fromme, P., Levitt, M., Schroeder, G.F., Brunger, A.T.

(2012) Structure 20: 957-966

Released	2012-08-15
Method	X-RAY DIFFRACTION 4.9228 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Unique protein chains: 12
Unique Ligands	BCR, CA, CLA, LHG, LMG, PQN, SF4

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4HWY \| pdb_00004hwy	Download File View File

Trypanosoma brucei procathepsin B solved from 40 fs free-electron laser pulse data by serial femtosecond X-ray crystallography

Redecke, L., Nass, K., DePonte, D.P., White, T.A., Rehders, D., Barty, A., Stellato, F., Liang, M., Barends, T.R.M., Boutet, S., Williams, G.W., Messerschmidt, M., Seibert, M.M., Aquila, A., Arnlund, D., Bajt, S., Barth, T., Bogan, M.J., Caleman, C., Chao, T.-C., Doak, R.B., Fleckenstein, H., Frank, M., Fromme, R., Galli, L., Grotjohann, I., Hunter, M.S., Johansson, L.C., Kassemeyer, S., Katona, G., Kirian, R.A., Koopmann, R., Kupitz, C., Lomb, L., Martin, A.V., Mogk, S., Neutze, R., Shoemann, R.L., Steinbrener, J., Timneanu, N., Wang, D., Weierstall, U., Zatsepin, N.A., Spence, J.C.H., Fromme, P., Schlichting, I., Duszenko, M., Betzel, C., Chapman, H.

(2013) Science 339: 227-230

Released	2012-12-05
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Trypanosoma brucei brucei TREU927
Macromolecule	Cysteine peptidase C (CPC) (protein)
Unique branched monosaccharides	BMA, NAG

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4N4Z \| pdb_00004n4z	Download File View File

Trypanosoma brucei procathepsin B structure solved by Serial Microcrystallography using synchrotron radiation

Gati, C., Bourenkov, G., Klinge, M., Rehders, D., Stellato, F., Oberthuer, D., White, T.A., Yevanov, O., Sommer, B.P., Mogk, S., Duszenko, M., Betzel, C., Schneider, T.R., Chapman, H.N., Redecke, L.

(2014) IUCrJ 1: 87-94

Released	2014-02-05
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	Cysteine peptidase C (CPC) (protein)
Unique branched monosaccharides	BMA, NAG

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4NC3 \| pdb_00004nc3	Download File View File

Crystal structure of the 5-HT2B receptor solved using serial femtosecond crystallography in lipidic cubic phase.

Liu, W., Wacker, D., Gati, C., Han, G.W., James, D., Wang, D., Nelson, G., Weierstall, U., Katritch, V., Barty, A., Zatsepin, N.A., Li, D., Messerschmidt, M., Boutet, S., Williams, G.J., Koglin, J.E., Seibert, M.M., Wang, C., Shah, S.T.A., Basu, S., Fromme, R., Kupitz, C., Rendek, K.N., Grotjohann, I., Fromme, P., Kirian, R.A., Beyerlein, K.R., White, T.A., Chapman, H.N., Caffrey, M., Spence, J.C.H., Stevens, R.C., Cherezov, V., GPCR Network (GPCR)

(2013) Science 342: 1521-1524

Released	2013-12-18
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli Homo sapiens
Macromolecule	Chimera protein of human 5-hydroxytryptamine receptor 2B and E. Coli soluble cytochrome b562 (protein)
Unique Ligands	CLR, DGA, ERM, OLA, OLC, PEG, PLM, TRS

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4O34 \| pdb_00004o34	Download File View File

Room temperature macromolecular serial crystallography using synchrotron radiation

Stellato, F., Oberthuer, D., Liang, M., Bean, R., Gati, C., Yefanov, O., Barty, A., Burkhardt, A., Fischer, P., Galli, L., Kirian, R.A., Mayer, J., Pannerselvam, S., Yoon, C.H., Chervinskii, F., Speller, E., White, T.A., Betzel, C., Meents, A., Chapman, H.N.

(2014) IUCrJ 1: 204-212

Released	2014-06-11
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	CL, NA

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4O9R \| pdb_00004o9r	Download File View File

Human Smoothened Receptor structure in complex with cyclopamine

Wang, C., Weierstall, U., James, D., White, T.A., Wang, D., Liu, W., Spence, J.C.H., Doak, R.B., Nelson, G., Fromme, P., Fromme, R., Grotjohann, I., Kupitz, C., Zatsepin, N.A., Liu, H., Basu, S., Wacker, D., Han, G.W., Katritch, V., Boutet, S., Messerschmidt, M., Willams, G.J., Koglin, J.E., Seibert, M.M., Klinker, M., Gati, C., Shoeman, R.L., Barty, A., Chapman, H.N., Kirian, R.A., Beyerlein, K.R., Stevens, R.C., Li, D., Shah, S.T.A., Howe, N., Caffrey, M., Cherezov, V., GPCR Network (GPCR)

(2014) Nat Commun 5: 3309-3309

Released	2014-03-05
Method	X-RAY DIFFRACTION 3.204 Å
Organisms	Escherichia coli Homo sapiens
Macromolecule	Smoothened homolog/Soluble cytochrome b562 chimeric protein (protein)
Unique Ligands	CY8

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4PBU \| pdb_00004pbu	Download File View File

Serial Time-resolved crystallography of Photosystem II using a femtosecond X-ray laser The S1 state

Kupitz, C., Basu, S., Grotjohann, I., Fromme, R., Zatsepin, N., Rendek, K.N., Hunter, M., Shoeman, R.L., White, T.A., Wang, D., James, D., Yang, J.H., Cobb, D.E., Reeder, B., Sierra, R.G., Liu, H., Barty, A., Aquila, A., Deponte, D., Kirian, R.A., Bari, S., Bergkamp, J.J., Beyerlein, K., Bogan, M.J., Caleman, C., Chao, T.-C., Conrad, C.E., Davis, K.M., Fleckenstein, H., Galli, L., Hau-Riege, S.P., Kassemeyer, S., Laksmono, H., Liang, M., Lomb, L., Marchesini, S., Martin, A.V., Messerschmidt, M., Milathianaki, D., Nass, K., Ros, A., Roy-Chowdhury, S., Schmidt, K., Seibert, M., Steinbrener, J., Stellato, F., Yan, L., Yoon, C., Moore, T.A., Moore, A.L., Pushkar, Y., Williams, G.J., Boutet, S., Doak, R.B., Weierstall, U., Frank, M., Chapman, H.N., Spence, J.C.H., Fromme, P.

(2014) Nature 513: 261-265

Released	2014-07-16
Method	X-RAY DIFFRACTION 5 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Unique protein chains: 19
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, HEM, LHG, MG, OEX, PHO, PL9, SQD

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4RVY \| pdb_00004rvy	Download File View File

Serial Time resolved crystallography of Photosystem II using a femtosecond X-ray laser. The S state after two flashes (S3)

Kupitz, C., Basu, S., Grotjohann, I., Fromme, R., Zatsepin, N., Rendek, K.N., Hunter, M., Shoeman, R.L., White, T.A., Wang, D., James, D., Yang, J.-H., Cobb, D.E., Reeder, B., Sierra, R.G., Liu, H., Barty, A., Aquila, A., Deponte, D., Kirian, R., Bari, S., Bergkamp, J.J., Beyerlein, K., Bogan, M.J., Caleman, C., Chao, T.-C., Conrad, C.E., Davis, K.M., Fleckenstein, H., Galli, L., Hau-Riege, S.P., Kassemeyer, S., Laksmono, H., Liang, M., Lomb, L., Marchesini, S., Martin, A.V., Messerschmidt, M., Milathianaki, D., Nass, K., Ros, A., Roy-Chowdhury, S., Schmidt, K., Seibert, M., Steinbrener, J., Stellato, F., Yan, L., Yoon, C., Moore, T.A., Moore, A.L., Pushkar, Y., Williams, G.J., Boutet, S., Doak, R.B., Weierstall, U., Frank, M., Chapman, H.N., Spence, J.C.H., Fromme, P.

(2014) Nature 513: 261-265

Released	2015-11-04
Method	X-RAY DIFFRACTION 5.5 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Unique protein chains: 19
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, HEM, LHG, LMG, MG, OEX, PHO, PL9, SQD

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4RWA \| pdb_00004rwa	Download File View File

Synchrotron structure of the human delta opioid receptor in complex with a bifunctional peptide (PSI community target)

Fenalti, G., Zatsepin, N.A., Betti, C., Giguere, P., Han, G.W., Ishchenko, A., Liu, W., Guillemyn, K., Zhang, H., James, D., Wang, D., Weierstall, U., Spence, J.C.H., Boutet, S., Messerschmidt, M., Williams, G.J., Gati, C., Yefanov, O.M., White, T.A., Oberthuer, D., Metz, M., Yoon, C.H., Barty, A., Chapman, H.N., Basu, S., Coe, J., Conrad, C.E., Fromme, R., Fromme, P., Tourwe, D., Schiller, P.W., Roth, B.L., Ballet, S., Katritch, V., Stevens, R.C., Cherezov, V., GPCR Network (GPCR)

(2015) Nat Struct Mol Biol 22: 265-268

Released	2015-01-14
Method	X-RAY DIFFRACTION 3.28 Å
Organisms	Escherichia coli Homo sapiens synthetic construct
Macromolecule	Soluble cytochrome b562,Delta-type opioid receptor (protein) bifunctional peptide (protein)
Unique Ligands	OLC

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4RWD \| pdb_00004rwd	Download File View File

XFEL structure of the human delta opioid receptor in complex with a bifunctional peptide

Fenalti, G., Zatsepin, N.A., Betti, C., Giguere, P., Han, G.W., Ishchenko, A., Liu, W., Guillemyn, K., Zhang, H., James, D., Wang, D., Weierstall, U., Spence, J.C.H., Boutet, S., Messerschmidt, M., Williams, G.J., Gati, C., Yefanov, O.M., White, T.A., Oberthuer, D., Metz, M., Yoon, C.H., Barty, A., Chapman, H.N., Basu, S., Coe, J., Conrad, C.E., Fromme, R., Fromme, P., Tourwe, D., Schiller, P.W., Roth, B.L., Ballet, S., Katritch, V., Stevens, R.C., Cherezov, V., GPCR Network (GPCR)

(2015) Nat Struct Mol Biol 22: 265-268

Released	2015-01-14
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Escherichia coli Homo sapiens synthetic construct
Macromolecule	Soluble cytochrome b562,Delta-type opioid receptor (protein) bifunctional peptide (protein)
Unique Ligands	NA, OLA, OLC

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4UXW \| pdb_00004uxw	Download File View File

Structure of delta4-DgkA-apo in 9.9 MAG

Li, D., Pye, V.E., Aragao, D., Caffrey, M.

(2015) Nat Commun 6: 10140

Released	2015-09-30
Method	X-RAY DIFFRACTION 3.15 Å
Organisms	Escherichia coli K-12
Macromolecule	DIACYLGLYCEROL KINASE (protein)
Unique Ligands	MPD, NA, NO3, OLC

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4UXX \| pdb_00004uxx	Download File View File

Structure of delta4-DgkA with AMPPCP in 9.9 MAG

Li, D., Vogeley, L., Caffrey, M.

(2015) Nat Commun 6: 10140

Released	2015-09-30
Method	X-RAY DIFFRACTION 2.701 Å
Organisms	Escherichia coli K-12
Macromolecule	DIACYLGLYCEROL KINASE (protein)
Unique Ligands	ACP, ACT, CL, MPD, NA, OLC, ZN

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4UXZ \| pdb_00004uxz	Download File View File

Structure of delta7-DgkA-syn in 7.9 MAG to 2.18 angstrom resolution

Li, D., Howe, N., Caffrey, M.

(2015) Nat Commun 6: 10140

Released	2015-09-30
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Escherichia coli K-12
Macromolecule	DIACYLGLYCEROL KINASE-DELTA 7 (protein)
Unique Ligands	79M, 79N, ACT, FLC, ZN

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4UYO \| pdb_00004uyo	Download File View File

Structure of delta7-DgkA in 7.9 MAG by serial femtosecond crystatallography to 2.18 angstrom resolution

Li, D., Howe, N., Other, O., Caffrey, M.

(2015) Nat Commun 6: 10140

Released	2015-09-30
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Escherichia coli K-12
Macromolecule	DIACYLGLYCEROL KINASE-DELTA 7 (protein)
Unique Ligands	79M, 79N, FLC, ZN

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

3MOR | pdb_00003mor

3PCQ | pdb_00003pcq

4AC5 | pdb_00004ac5

4CAS | pdb_00004cas

4ET8 | pdb_00004et8

4ET9 | pdb_00004et9

4ETA | pdb_00004eta

4ETB | pdb_00004etb

4ETC | pdb_00004etc

4ETD | pdb_00004etd

4ETE | pdb_00004ete

4FE1 | pdb_00004fe1

4HWY | pdb_00004hwy

4N4Z | pdb_00004n4z

4NC3 | pdb_00004nc3

4O34 | pdb_00004o34

4O9R | pdb_00004o9r

4PBU | pdb_00004pbu

4RVY | pdb_00004rvy

4RWA | pdb_00004rwa

4RWD | pdb_00004rwd

4UXW | pdb_00004uxw

4UXX | pdb_00004uxx

4UXZ | pdb_00004uxz

4UYO | pdb_00004uyo