RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Sharma, A."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 235 Structures.

Refinements

Structure Determination Methodology

experimental (235)

Scientific Name of Source Organism

	Plasmodium falciparum 3D7 (60)
	Homo sapiens (48)
	Toxoplasma gondii (20)
	synthetic construct (10)
	Escherichia coli K-12 (9)
	Momordica charantia (9)
	Toxoplasma gondii ME49 (9)
	Escherichia coli (6)
	Plasmodium vivax (6)
	Bos taurus (5)

More...

Taxonomy

	Eukaryota (196)
	Bacteria (32)
	Riboviria (14)
	other sequences (10)
	Riboviria (RNA viruses and viroids) (2)
	Archaea (1)
	Varidnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (226)
	ELECTRON MICROSCOPY (7)
	SOLUTION NMR (2)

Polymer Entity Type

	Protein (235)
	DNA (9)
	RNA (1)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (11)
	1.5 - 2.0 (66)
	2.0 - 2.5 (67)
	2.5 - 3.0 (57)
	3.0 - 3.5 (23)
	3.5 - 4.0 (8)

Release Date

	1995 - 1999 (3)
	2000 - 2004 (4)
	2005 - 2009 (19)
	2010 - 2014 (65)
	2015 - 2019 (69)
	2020 - 2024 (73)
	2025 - 2029 (2)

Enzyme Classification Name

	Hydrolases (54)
	Ligases (69)
	Oxidoreductases (22)
	Transferases (14)
	Isomerases (2)
	Lyases (2)

Membrane Protein Annotation

	MemProtMD (3)
	PDBTM (3)
	OPM (4)

Symmetry Type

	Asymmetric (121)
	Cyclic (109)
	Dihedral (5)
	Icosahedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (33)
	All beta proteins (51)
	Alpha and beta proteins (a+b) (41)
	Artifacts (21)
	All alpha proteins (8)
	Membrane and cell surface proteins and peptides (1)
	Multi-domain proteins (alpha and beta) (1)

AllSelected

1 to 25 of 235 Structures

Page 1 of 10

Sort by

Explore in 3D

1FFN \| pdb_00001ffn	Download File View File

CRYSTAL STRUCTURE OF MURINE CLASS I H-2DB COMPLEXED WITH PEPTIDE GP33(C9M)

Wang, B., Sharma, A., Maile, R., Saad, M., Collins, E.J., Frelinger, J.A.

(2002) J Immunol 169: 3137-3145

Released	2002-12-11
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mus musculus
Macromolecule	BETA-2 MICROGLOBULIN, BETA CHAIN (protein) H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN (protein) SYNTHETIC PEPTIDE WITH SEQUENCE LYS-ALA-VAL-TYR-ASN-PHE-ALA-THR-MET (protein)

Explore in 3D

1FFO \| pdb_00001ffo	Download File View File

CRYSTAL STRUCTURE OF MURINE CLASS I H-2DB COMPLEXED WITH SYNTHETIC PEPTIDE GP33 (C9M/K1A)

Wang, B., Sharma, A., Maile, R., Saad, M., Collins, E.J., Frelinger, J.A.

(2002) J Immunol 169: 3137-3145

Released	2002-12-11
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Mus musculus
Macromolecule	BETA-2 MICROGLOBULIN BETA CHAIN (protein) H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B, ALPHA CHAIN (protein) PEPTIDE WITH SEQUENCE ALA-ALA-VAL-TYR-ASN-PHE-ALA-THR-MET (protein)

Explore in 3D

1FFP \| pdb_00001ffp	Download File View File

CRYSTAL STRUCTURE OF MURINE CLASS I H-2DB COMPLEXED WITH PEPTIDE GP33 (C9M/K1S)

Wang, B., Sharma, A., Maile, R., Saad, M., Collins, E.J., Frelinger, J.A.

(2002) J Immunol 169: 3137-3145

Released	2002-12-11
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Mus musculus
Macromolecule	BETA-2 MICROGLOBULIN BETA CHAIN (protein) H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B, ALPHA CHAIN (protein) SYNTHETIC PEPTIDE WITH SEQUENCE SER-ALA-VAL-TYR-ASN-PHE-ALA-THR-MET (protein)

Explore in 3D

1FNH \| pdb_00001fnh	Download File View File

CRYSTAL STRUCTURE OF HEPARIN AND INTEGRIN BINDING SEGMENT OF HUMAN FIBRONECTIN

Sharma, A., Askari, J., Humphries, M., Jones, E.Y., Stuart, D.I.

(1999) EMBO J 18: 1468-1479

Released	1999-03-16
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (FIBRONECTIN) (protein)

Explore in 3D

1N81 \| pdb_00001n81	Download File View File

Crystal structure of Pfg27 from Plasmodium falciparum

Sharma, A., Sharma, I., Kogkasuriyachai, D., Kumar, N.

(2003) Nat Struct Biol 10: 197-203

Released	2003-03-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	plasmodium falciparum gamete antigen 27/25 (protein)

Explore in 3D

1OIS \| pdb_00001ois	Download File View File

YEAST DNA TOPOISOMERASE I, N-TERMINAL FRAGMENT

Lue, N., Sharma, A., Mondragon, A., Wang, J.C.

(1995) Structure 3: 1315-1322

Released	1997-03-12
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	DNA TOPOISOMERASE I (protein)

Explore in 3D

1VCC \| pdb_00001vcc	Download File View File

AMINO TERMINAL 9KDA DOMAIN OF VACCINIA VIRUS DNA TOPOISOMERASE I RESIDUES 1-77, EXPERIMENTAL ELECTRON DENSITY FOR RESIDUES 1-77

Sharma, A., Hanai, R., Mondragon, A.

(1994) Structure 2: 767-777

Released	1996-03-08
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Vaccinia virus WR
Macromolecule	DNA TOPOISOMERASE I (protein)

Explore in 3D

2HN8 \| pdb_00002hn8	Download File View File

Structural characterization and oligomerization of PB1-F2, a pro-apoptotic influenza A virus protein

Bruns, K., Studtrucker, N., Sharma, A., Fossen, T., Mitzner, D., Eissmann, A., Tessmer, U., Roder, R., Henklein, P., Wray, V., Schubert, U.

(2007) J Biological Chem 282: 353-363

Released	2006-11-07
Method	SOLUTION NMR
Organisms	Influenza A virus (strain A/Puerto Rico/8/1934 H1N1)
Macromolecule	Protein PB1-F2 (protein)

Explore in 3D

2K84 \| pdb_00002k84	Download File View File

Solution Structure of the equine infectious anemia virus p9 GAG protein

Sharma, A., Bruns, K., Roeder, R., Henklein, P., Votteler, J., Wray, V., Sharma, U.

(2009) BMC Struct Biol 9: 74-74

Released	2009-09-08
Method	SOLUTION NMR
Organisms	Equine infectious anemia virus (strain Wyoming)
Macromolecule	P9 (protein)

Explore in 3D

2OGW \| pdb_00002ogw	Download File View File

Structure of ABC type zinc transporter from E. coli

Sharma, A., Yogavel, M.

(2007) J Mol Biology 367: 970-982

Released	2007-03-06
Method	X-RAY DIFFRACTION 1.83 Å
Organisms	Escherichia coli
Macromolecule	High-affinity zinc uptake system protein znuA precursor (protein)
Unique Ligands	ZN

Explore in 3D

2Q2L \| pdb_00002q2l	Download File View File

Crystal Structure of Superoxide Dismutase from P. atrosanguina

Manickam, Y., Gill, J., Mishra, P.C., Sharma, A.

(2007) Acta Crystallogr D Biol Crystallogr 63: 931-934

Released	2008-03-25
Method	X-RAY DIFFRACTION 2.367 Å
Organisms	Potentilla atrosanguinea
Macromolecule	Superoxide Dismutase (protein)
Unique Ligands	IOD, ZN

Explore in 3D

2VWA \| pdb_00002vwa	Download File View File

Crystal structure of a sporozoite protein essential for liver stage development of malaria parasite

Sharma, A., Sharma, A., Yogavel, M., Gill, J., Akhouri, R.R.

(2008) J Biological Chem 283: 24077

Released	2008-07-08
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	PUTATIVE UNCHARACTERIZED PROTEIN PF13_0012 (protein)
Unique Ligands	PTY

Explore in 3D

2W8B \| pdb_00002w8b	Download File View File

Crystal structure of processed TolB in complex with Pal

Sharma, A., Bonsor, D.A., Kleanthous, C.

(2009) EMBO J 28: 2846

Released	2009-02-17
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Escherichia coli
Macromolecule	PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN (protein) PROTEIN TOLB (protein)
Unique Ligands	ACT, GOL, SO4

Explore in 3D

2WPT \| pdb_00002wpt	Download File View File

The crystal structure of Im2 in complex with colicin E9 DNase

Meenan, N.A., Sharma, A., Fleishman, S.J., Macdonald, C.J., Boetzel, R., Moore, G.R., Baker, D., Kleanthous, C.

(2010) Proc Natl Acad Sci U S A 107: 10080

Released	2010-06-02
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Escherichia coli
Macromolecule	COLICIN-E2 IMMUNITY PROTEIN (protein) COLICIN-E9 (protein)
Unique Ligands	GOL, NO3

Explore in 3D

2WQH \| pdb_00002wqh	Download File View File

Crystal structure of CTPR3Y3

Krachler, A.M., Sharma, A., Kleanthous, C.

(2010) Proteins 78: 2131-2143

Released	2010-04-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	synthetic construct
Macromolecule	CTPR3Y3 (protein)
Unique Ligands	EDO, MPD, MRD

Explore in 3D

2WZ7 \| pdb_00002wz7	Download File View File

Crystal structure of the N-terminal domain of E.coli YbgF

Krachler, A.M., Sharma, A., Kleanthous, C.

(2010) J Mol Biology 403: 270

Released	2010-09-15
Method	X-RAY DIFFRACTION 2.48 Å
Organisms	Escherichia coli
Macromolecule	UNCHARACTERIZED PROTEIN YBGF (protein)
Unique Ligands	ACT, AU, AUC, EDO, GOL, NA

Explore in 3D

2XDJ \| pdb_00002xdj	Download File View File

Crystal structure of the N-terminal domain of E.coli YbgF

Krachler, A.M., Sharma, A., Kleanthous, C.

(2010) J Mol Biology 403: 270

Released	2010-09-15
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Escherichia coli
Macromolecule	UNCHARACTERIZED PROTEIN YBGF (protein)
Unique Ligands	ACT, NA

Explore in 3D

2XEV \| pdb_00002xev	Download File View File

Crystal structure of the TPR domain of Xanthomonas campestris ybgF

Krachler, A.M., Sharma, A., Kleanthous, C.

(2010) J Mol Biology 403: 270

Released	2010-09-15
Method	X-RAY DIFFRACTION 1.57 Å
Organisms	Xanthomonas campestris
Macromolecule	YBGF (protein)
Unique Ligands	CL, ZN

Explore in 3D

3AFP \| pdb_00003afp	Download File View File

Crystal structure of the single-stranded DNA binding protein from Mycobacterium leprae (Form I)

Kaushal, P.S., Singh, P., Sharma, A., Muniyappa, K., Vijayan, M.

(2010) Acta Crystallogr D Biol Crystallogr 66: 1048-1058

Released	2010-10-06
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Mycobacterium leprae TN
Macromolecule	Single-stranded DNA-binding protein (protein)
Unique Ligands	CD, GOL