RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Rudolph, M.G."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 1,061 Structures.

Refinements

Structure Determination Methodology

experimental (1,061)

Scientific Name of Source Organism

	Homo sapiens (704)
	Rattus norvegicus (290)
	Mus musculus (22)
	Thermus thermophilus HB27 (16)
	Thermotoga maritima (8)
	Cutibacterium acnes (5)
	synthetic construct (4)
	Sendai virus (strain Enders) (3)
	Thermotoga maritima MSB8 (3)
	Thermus thermophilus (3)

More...

Taxonomy

	Eukaryota (1,017)
	Bacteria (43)
	Eukaryota (eukaryotes) (16)
	Riboviria (RNA viruses and viroids) (6)
	other sequences (4)
	Riboviria (2)
	unclassified sequences (1)

Experimental Method

X-RAY DIFFRACTION (1,061)

Polymer Entity Type

	Protein (1,061)
	DNA (3)
	RNA (1)

Refinement Resolution (Å)

	0.5 - 1.0 (20)
	1.0 - 1.5 (273)
	1.5 - 2.0 (346)
	2.0 - 2.5 (354)
	2.5 - 3.0 (59)
	3.0 - 3.5 (6)
	3.5 - 4.0 (2)
	4.0 - 4.5 (1)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (20)
	2005 - 2009 (33)
	2010 - 2014 (58)
	2015 - 2019 (185)
	2020 - 2024 (764)

Enzyme Classification Name

	Hydrolases (543)
	Transferases (200)
	Isomerases (17)
	Oxidoreductases (20)
	Lyases (1)

Membrane Protein Annotation

	PDBTM (3)
	mpstruc (3)
	MemProtMD (2)
	OPM (2)

Symmetry Type

	Asymmetric (1,002)
	Cyclic (47)
	Dihedral (26)
	Helical (1)

SCOP Classification

	Alpha and beta proteins (a/b) (100)
	All beta proteins (67)
	Multi-domain proteins (alpha and beta) (24)
	Alpha and beta proteins (a+b) (42)
	Artifacts (29)
	All alpha proteins (15)
	Small proteins (30)

AllSelected

1 to 25 of 1,061 Structures

Page 1 of 43

Sort by

Explore in 3D

1A4R \| pdb_00001a4r	Download File View File

G12V MUTANT OF HUMAN PLACENTAL CDC42 GTPASE IN THE GDP FORM

Rudolph, M.G., Vetter, I.R., Wittinghofer, A.

(1999) Protein Sci 8: 778-787

Released	1999-03-02
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	G25K GTP-BINDING PROTEIN (protein)
Unique Ligands	GDP, GNH, MG

Explore in 3D

1FZJ \| pdb_00001fzj	Download File View File

MHC CLASS I NATURAL MUTANT H-2KBM1 HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN

Rudolph, M.G., Speir, J.A., Brunmark, A., Mattsson, N., Jackson, M.R., Peterson, P.A., Teyton, L., Wilson, I.A.

(2001) Immunity 14: 231-242

Released	2001-03-28
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Mus musculus Vesicular stomatitis Indiana virus (strain Glasgow)
Macromolecule	BETA-2-MICROGLOBULIN (protein) H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN (protein) NUCLEOCAPSID PROTEIN (protein)
Unique Ligands	MPD, NAG, PO4
Unique branched monosaccharides	FUL, NAG

Explore in 3D

1FZK \| pdb_00001fzk	Download File View File

MHC CLASS I NATURAL MUTANT H-2KBM1 HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND SENDAI VIRUS NUCLEOPROTEIN

Rudolph, M.G., Speir, J.A., Brunmark, A., Mattsson, N., Jackson, M.R., Peterson, P.A., Teyton, L., Wilson, I.A.

(2001) Immunity 14: 231-242

Released	2001-03-28
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Mus musculus Sendai virus (strain Enders)
Macromolecule	H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN (protein) PROTEIN (BETA-2-MICROGLOBULIN) (protein) PROTEIN (NUCLEOCAPSID PROTEIN) (protein)
Unique Ligands	MPD, MRD, NAG, PO4
Unique branched monosaccharides	FUL, NAG

Explore in 3D

1FZM \| pdb_00001fzm	Download File View File

MHC CLASS I NATURAL MUTANT H-2KBM8 HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN

Rudolph, M.G., Speir, J.A., Brunmark, A., Mattsson, N., Jackson, M.R., Peterson, P.A., Teyton, L., Wilson, I.A.

(2001) Immunity 14: 231-242

Released	2001-03-28
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Mus musculus Vesicular stomatitis Indiana virus (strain Glasgow)
Macromolecule	H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN (protein) PROTEIN (BETA-2-MICROGLOBULIN) (protein) PROTEIN (NUCLEOCAPSID PROTEIN) (protein)
Unique Ligands	MPD, MRD, NAG, PO4
Unique branched monosaccharides	FUL, NAG

Explore in 3D

1FZO \| pdb_00001fzo	Download File View File

MHC CLASS I NATURAL MUTANT H-2KBM8 HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND SENDAI VIRUS NUCLEOPROTEIN

Rudolph, M.G., Speir, J.A., Brunmark, A., Mattsson, N., Jackson, M.R., Peterson, P.A., Teyton, L., Wilson, I.A.

(2001) Immunity 14: 231-242

Released	2001-03-28
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Mus musculus Sendai virus (strain Enders)
Macromolecule	H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN (protein) PROTEIN (BETA-2-MICROGLOBULIN) (protein) PROTEIN (NUCLEOCAPSID PROTEIN) (protein)
Unique Ligands	MPD, MRD, NAG, PO4
Unique branched monosaccharides	FUL, NAG

Explore in 3D

1G6R \| pdb_00001g6r	Download File View File

A FUNCTIONAL HOT SPOT FOR ANTIGEN RECOGNITION IN A SUPERAGONIST TCR/MHC COMPLEX

Degano, M., Garcia, K.C., Apostolopoulos, V., Rudolph, M.G., Teyton, L., Wilson, I.A.

(2000) Immunity 12: 251-261

Released	2000-11-15
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mus musculus
Macromolecule	ALPHA T CELL RECEPTOR (protein) BETA T CELL RECEPTOR (protein) BETA-2 MICROGLOBULIN (protein) MAJOR HISTOCOMPATIBILITY COMPLEX CLASS I MOLECULE (protein) SIYR PEPTIDE (protein)

Explore in 3D

1HQ8 \| pdb_00001hq8	Download File View File

CRYSTAL STRUCTURE OF THE MURINE NK CELL-ACTIVATING RECEPTOR NKG2D AT 1.95 A

Wolan, D.W., Teyton, L., Rudolph, M.G., Villmow, B., Bauer, S., Busch, D.H., Wilson, I.A.

(2001) Nat Immunol 2: 248-254

Released	2001-03-07
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Mus musculus
Macromolecule	NKG2-D (protein)

Explore in 3D

1I9E \| pdb_00001i9e	Download File View File

TCR DOMAIN

Rudolph, M.G., Huang, M., Teyton, L., Wilson, I.A.

(2001) J Mol Biology 314: 1-8

Released	2001-12-05
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mus musculus
Macromolecule	CYTOTOXIC TCELL VALPHA DOMAIN (protein)
Unique Ligands	NAG

Explore in 3D

1KJM \| pdb_00001kjm	Download File View File

TAP-A-associated rat MHC class I molecule

Rudolph, M.G., Stevens, J., Speir, J.A., Trowsdale, J., Butcher, G.W., Joly, E., Wilson, I.A.

(2002) J Mol Biology 324: 975-990

Released	2002-12-18
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Rattus norvegicus
Macromolecule	B6 Peptide (protein) RT1 class I histocompatibility antigen, AA alpha chain, heavy chain (protein) beta-2-Microglobulin (protein)
Unique Ligands	SO4

Explore in 3D

1KJV \| pdb_00001kjv	Download File View File

TAP-B-associated rat MHC class I molecule

Rudolph, M.G., Stevens, J., Speir, J.A., Trowsdale, J., Butcher, G.W., Joly, E., Wilson, I.A.

(2002) J Mol Biology 324: 975-990

Released	2002-12-18
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Rattus norvegicus
Macromolecule	Mature alpha chain of major histocompatibility complex class I antigen (HEAVY CHAIN) (protein) beta-2-microglobulin (protein) peptide NPR (protein)
Unique Ligands	SO4

Explore in 3D

1KPU \| pdb_00001kpu	Download File View File

High resolution crystal structure of the MHC class I complex H-2Kb/VSV8

Rudolph, M.G., Wilson, I.A.

To be published

Released	2003-06-10
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Mus musculus Vesicular stomatitis Indiana virus
Macromolecule	H-2 class I histocompatibility antigen, K-B alpha chain (protein) beta-2-microglobulin (protein) nucleocapsid (protein)
Unique Ligands	MPD, NAG
Unique branched monosaccharides	FUC, NAG

Explore in 3D

1KPV \| pdb_00001kpv	Download File View File

High resolution crystal structure of the MHC class I complex H-2Kb/SEV9

Rudolph, M.G., Wilson, I.A.

To be published

Released	2003-06-10
Method	X-RAY DIFFRACTION 1.71 Å
Organisms	Mus musculus Sendai virus (strain Enders)
Macromolecule	H-2 class I histocompatibility antigen, K-B alpha chain (protein) Nucleocapsid protein (protein) beta-2-microglobulin (protein)
Unique Ligands	MPD, PO4
Unique branched monosaccharides	FUC, NAG

Explore in 3D

1L2H \| pdb_00001l2h	Download File View File

Crystal structure of Interleukin 1-beta F42W/W120F mutant

Rudolph, M.G., Kelker, M.S., Schneider, T.R., Yeates, T.O., Oseroff, V., Heidary, D.K., Jennings, P.A., Wilson, I.A.

(2003) Acta Crystallogr D Biol Crystallogr 59: 290-298

Released	2003-02-04
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Homo sapiens
Macromolecule	Interleukin 1-beta (protein)

Explore in 3D

1LEG \| pdb_00001leg	Download File View File

Crystal Structure of H-2Kb bound to the dEV8 peptide

Luz, J.G., Huang, M., Garcia, K.C., Rudolph, M.G., Apostolopoulos, V., Teyton, L., Wilson, I.A.

(2002) J Exp Medicine 195: 1175-1186

Released	2002-06-19
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Mus musculus
Macromolecule	BETA-2-MICROGLOBULIN (protein) H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN (protein) NADH-ubiquinone oxidoreductase MLRQ subunit (protein)
Unique Ligands	NAG, PO4
Unique branched monosaccharides	FUC, NAG

Explore in 3D

1LEK \| pdb_00001lek	Download File View File

Crystal Structure of H-2Kbm3 bound to dEV8

Luz, J.G., Huang, M., Garcia, K.C., Rudolph, M.G., Apostolopoulos, V., Teyton, L., Wilson, I.A.

(2002) J Exp Medicine 195: 1175-1186

Released	2002-06-26
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Mus musculus
Macromolecule	Beta-2-microglobulin (protein) H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN (protein) dEV8 (protein)
Unique Ligands	NAG, PO4
Unique branched monosaccharides	FUC, NAG

Explore in 3D

1LK2 \| pdb_00001lk2	Download File View File

1.35A crystal structure of H-2Kb complexed with the GNYSFYAL peptide

Luz, J.G., Rudolph, M.G., Wilson, I.A., Eisen, H.

(2004) J Immunol 172: 2994-3002

Released	2003-11-11
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Mus musculus
Macromolecule	Beta-2-microglobulin (protein) H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN (protein) INSULIN RECEPTOR, BETA-SUBUNIT (protein)
Unique Ligands	MPD, MRD, NAG, PO4
Unique branched monosaccharides	FUC, NAG

Explore in 3D

1MWA \| pdb_00001mwa	Download File View File

2C/H-2KBM3/DEV8 ALLOGENEIC COMPLEX

Luz, J.G., Huang, M.D., Garcia, K.C., Rudolph, M.G., Teyton, L., Wilson, I.A.

(2002) J Exp Medicine 195: 1175-1186

Released	2002-11-27
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Mus musculus
Macromolecule	2C T CELL RECEPTOR ALPHA CHAIN (protein) 2C T CELL RECEPTOR BETA CHAIN (protein) DEV8 (protein) H-2KBM3 MHC CLASS I MOLECULE HEAVY CHAIN (protein) MICROGLOBULIN MHC LIGHT CHAIN (protein)
Unique Ligands	ACY, GOL, NAG
Unique branched monosaccharides	BMA, NAG

Explore in 3D

1N93 \| pdb_00001n93	Download File View File

Crystal Structure of the Borna Disease Virus Nucleoprotein

Rudolph, M.G., Kraus, I., Dickmanns, A., Garten, W., Ficner, R.

(2003) Structure 11: 1219-1226

Released	2003-10-07
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Borna disease virus
Macromolecule	p40 nucleoprotein (protein)

Explore in 3D

1PP1 \| pdb_00001pp1	Download File View File

Crystal structure of the Borna Disease Virus Nucleoprotein

Rudolph, M.G., Kraus, I., Dickmanns, A., Garten, W., Ficner, R.

(2003) Structure 11: 1219-1226

Released	2003-10-07
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Borna disease virus
Macromolecule	p40 nucleoprotein (protein)

Explore in 3D

1R3H \| pdb_00001r3h	Download File View File

Crystal Structure of T10

Rudolph, M.G., Wilson, I.A.

(2004) Acta Crystallogr D Biol Crystallogr 60: 656-664

Released	2004-03-30
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Beta-2-microglobulin (protein) MHC H2-TL-T10-129 (protein)

Explore in 3D

1S8F \| pdb_00001s8f	Download File View File

Crystal structure of Rab9 complexed to GDP reveals a dimer with an active conformation of switch II

Wittmann, J.G., Rudolph, M.G.

(2004) FEBS Lett 568: 23-29

Released	2004-06-11
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Canis lupus familiaris
Macromolecule	Ras-related protein Rab-9A (protein)
Unique Ligands	BEZ, CL, GDP, MG, SR

Explore in 3D

1Y1E \| pdb_00001y1e	Download File View File

human formylglycine generating enzyme

Rudolph, M.G., Dickmanns, A., Ficner, R.

(2005) Cell 121: 541-552

Released	2005-05-31
Method	X-RAY DIFFRACTION 1.73 Å
Organisms	Homo sapiens
Macromolecule	C-alpha-formyglycine-generating enzyme (protein)
Unique Ligands	CA, NAG

Explore in 3D

1Y1F \| pdb_00001y1f	Download File View File

human formylglycine generating enzyme with cysteine sulfenic acid

Rudolph, M.G., Dickmanns, A., Ficner, R.

(2005) Cell 121: 541-552

Released	2005-05-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	C-alpha-formyglycine-generating enzyme (protein)
Unique Ligands	CA
Unique branched monosaccharides	NAG

Explore in 3D

1Y1G \| pdb_00001y1g	Download File View File

Human formylglycine generating enzyme, double sulfonic acid form

Rudolph, M.G., Dickmanns, A., Ficner, R.

(2005) Cell 121: 541-552

Released	2005-05-31
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Homo sapiens
Macromolecule	C-alpha-formyglycine-generating enzyme (protein)
Unique Ligands	CA
Unique branched monosaccharides	NAG

Explore in 3D

1Y1H \| pdb_00001y1h	Download File View File

human formylglycine generating enzyme, oxidised Cys refined as hydroperoxide

Rudolph, M.G., Dickmanns, A., Ficner, R.

(2005) Cell 121: 541-552

Released	2005-05-31
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Homo sapiens
Macromolecule	C-alpha-formyglycine-generating enzyme (protein)
Unique Ligands	PEO, SR
Unique branched monosaccharides	NAG

1 to 25 of 1,061 Structures

Page 1 of 43

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1A4R | pdb_00001a4r

1FZJ | pdb_00001fzj

1FZK | pdb_00001fzk

1FZM | pdb_00001fzm

1FZO | pdb_00001fzo

1G6R | pdb_00001g6r

1HQ8 | pdb_00001hq8

1I9E | pdb_00001i9e

1KJM | pdb_00001kjm

1KJV | pdb_00001kjv

1KPU | pdb_00001kpu

1KPV | pdb_00001kpv

1L2H | pdb_00001l2h

1LEG | pdb_00001leg

1LEK | pdb_00001lek

1LK2 | pdb_00001lk2

1MWA | pdb_00001mwa

1N93 | pdb_00001n93

1PP1 | pdb_00001pp1

1R3H | pdb_00001r3h

1S8F | pdb_00001s8f

1Y1E | pdb_00001y1e

1Y1F | pdb_00001y1f

1Y1G | pdb_00001y1g

1Y1H | pdb_00001y1h