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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Park, S.Y."

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Search Summary

This query matches 640 Structures.

Refinements

Structure Determination Methodology

experimental (640)

Scientific Name of Source Organism

	Homo sapiens (55)
	Bacillus subtilis (42)
	synthetic construct (42)
	Escherichia coli K-12 (24)
	Escherichia coli (13)
	Agrobacterium fabrum str. C58 (11)
	Bacillus cereus ATCC 14579 (11)
	Bacillus subtilis subsp. subtilis str. 168 (10)
	Nostoc sp. PCC 7120 = FACHB-418 (9)
	Chromobacterium violaceum ATCC 12472 (8)

More...

Taxonomy

	Bacteria (463)
	Eukaryota (70)
	Archaea (58)
	other sequences (42)
	Duplodnaviria (4)
	Riboviria (1)

Experimental Method

	X-RAY DIFFRACTION (638)
	ELECTRON MICROSCOPY (1)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (640)
	DNA (10)

Refinement Resolution (Å)

	1.0 - 1.5 (14)
	1.5 - 2.0 (151)
	2.0 - 2.5 (256)
	2.5 - 3.0 (174)
	3.0 - 3.5 (44)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (59)
	2005 - 2009 (356)
	2010 - 2014 (199)
	2015 - 2019 (15)
	2020 - 2024 (10)

Enzyme Classification Name

	Hydrolases (67)
	Transferases (63)
	Oxidoreductases (40)
	Lyases (26)
	Isomerases (22)
	Translocases (4)
	Ligases (3)

Symmetry Type

	Asymmetric (341)
	Cyclic (305)
	Dihedral (86)
	Helical (2)
	Octahedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (115)
	Artifacts (103)
	All beta proteins (62)
	Alpha and beta proteins (a+b) (65)
	All alpha proteins (39)
	Multi-domain proteins (alpha and beta) (7)
	Small proteins (2)

AllSelected

1 to 25 of 640 Structures

Page 1 of 26

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1F35 \| pdb_00001f35	Download File View File

CRYSTAL STRUCTURE OF MURINE OLFACTORY MARKER PROTEIN

Smith, P.C., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

(2002) J Mol Biology 319: 807-821

Released	2001-08-15
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mus musculus
Macromolecule	OLFACTORY MARKER PROTEIN (protein)
Unique Ligands	CAC, ZN

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1F38 \| pdb_00001f38	Download File View File

X-RAY CRYSTALLOGRAPHIC STRUCTURE OF PRECORRIN 8W DECARBOXYLASE, THE PRODUCT OF GENE MT0146 IN THE METHANOBACTERIUM THERMOAUTOTROPHICUM GENOME

Keller, J.P., Smith, P.M., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

(2002) Structure 10: 1475-1487

Released	2003-06-10
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	PRECORRIN-8W DECARBOXYLASE (protein)

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1F3O \| pdb_00001f3o	Download File View File

Crystal structure of MJ0796 ATP-binding cassette

Yuan, Y.-R., Hunt, J.F.

(2001) J Biological Chem 276: 32313-32321

Released	2001-07-25
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0796 (protein)
Unique Ligands	ADP, MG

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1G31 \| pdb_00001g31	Download File View File

GP31 CO-CHAPERONIN FROM BACTERIOPHAGE T4

Hunt, J.F., Van Der Vies, S.M., Henry, L., Deisenhofer, J.

(1997) Cell 90: 361-371

Released	1998-08-26
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Tequatrovirus T4
Macromolecule	GP31 (protein)
Unique Ligands	K, PO4

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1G6H \| pdb_00001g6h	Download File View File

CRYSTAL STRUCTURE OF THE ADP CONFORMATION OF MJ1267, AN ATP-BINDING CASSETTE OF AN ABC TRANSPORTER

Yuan, Y.-R., Martsinkevich, O., Karpowich, N., Millen, L., Thomas, P.J., Hunt, J.F.

(2001) Structure 9: 571-586

Released	2001-07-18
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT ATP-BINDING PROTEIN (protein)
Unique Ligands	ADP, MG, MMC

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1G9X \| pdb_00001g9x	Download File View File

CHARACTERIZATION OF THE TWINNING STRUCTURE OF MJ1267, AN ATP-BINDING CASSETTE OF AN ABC TRANSPORTER

Yuan, Y.-R., Hunt, J.F.

(2003) Acta Crystallogr D Biol Crystallogr 59: 225-238

Released	2003-02-11
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT ATP-BINDING PROTEIN (protein)
Unique Ligands	ADP, MG, MMC

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1GAJ \| pdb_00001gaj	Download File View File

CRYSTAL STRUCTURE OF A NUCLEOTIDE-FREE ATP-BINDING CASSETTE FROM AN ABC TRANSPORTER

Karpowich, N., Yuan, Y.-R., Dai, P.L., Martsinkevich, O., Millen, L., Thomas, P.J., Hunt, J.F.

(2001) Structure 9: 571-586

Released	2001-07-18
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	HIGH-AFFINITY BRANCHED CHAIN AMINO ACID TRANSPORT ATP-BINDING PROTEIN (protein)
Unique Ligands	CL, PEG, SO4, TBU

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1IY9 \| pdb_00001iy9	Download File View File

Crystal structure of spermidine synthase

Tan, A.Y., Smith, P.C., Shen, J., Xiao, R., Acton, T., Rost, B., Montelione, G., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2002-10-30
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Bacillus subtilis
Macromolecule	Spermidine synthase (protein)

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1JOB \| pdb_00001job	Download File View File

Crystal Structure of Murine Olfactory Marker Protein in Spacegroup P3121

Smith, P., Hunt, J.F.

(2002) J Mol Biology 319: 807-821

Released	2001-08-22
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Mus musculus
Macromolecule	Olfactory Marker Protein (protein)
Unique Ligands	ZN

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1JOD \| pdb_00001jod	Download File View File

Crystal Structure of Murine Olfactory Marker Protein in Spacegroup P43212

Smith, P., Hunt, J.F.

(2002) J Mol Biology 319: 807-821

Released	2001-08-22
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Mus musculus
Macromolecule	Olfactory Marker Protein (protein)
Unique Ligands	CAC, ZN

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1KXZ \| pdb_00001kxz	Download File View File

MT0146, the Precorrin-6y methyltransferase (CbiT) homolog from M. Thermoautotrophicum, P1 spacegroup

Keller, J.P., Smith, P.M., Benach, J., Christendat, D., DeTitta, G., Hunt, J.F.

(2002) Structure 10: 1475-1487

Released	2002-11-27
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Precorrin-6y methyltransferase/putative decarboxylase (protein)

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1L2T \| pdb_00001l2t	Download File View File

Dimeric Structure of MJ0796, a Bacterial ABC Transporter Cassette

Smith, P.C., Karpowich, N., Rosen, J., Hunt, J.F.

(2002) Mol Cell 10: 139-149

Released	2002-07-24
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	Hypothetical ABC transporter ATP-binding protein MJ0796 (protein)
Unique Ligands	ATP, IPA, NA

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1L3B \| pdb_00001l3b	Download File View File

MT0146, THE PRECORRIN-6Y METHYLTRANSFERASE (CBIT) HOMOLOG FROM M. THERMOAUTOTROPHICUM, C2 SPACEGROUP W/ LONG CELL

Keller, J.P., Smith, P.M., Benach, J., Christendat, D., deTitta, G., Hunt, J.F.

(2002) Structure 10: 1475-1487

Released	2002-11-27
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Precorrin-6y methyltransferase/putative decarboxylase (protein)

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1L3C \| pdb_00001l3c	Download File View File

MT0146, THE PRECORRIN-6Y METHYLTRANSFERASE (CBIT) HOMOLOG FROM M. THERMOAUTOTROPHICUM, C2 SPACEGROUP WITH SHORT CELL

Keller, J.P., Smith, P.M., Benach, J., Christendat, D., deTitta, G., Hunt, J.F.

(2002) Structure 10: 1475-1487

Released	2002-11-27
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Precorrin-6y methyltransferase/putative decarboxylase (protein)

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1L3I \| pdb_00001l3i	Download File View File

MT0146, THE PRECORRIN-6Y METHYLTRANSFERASE (CBIT) HOMOLOG FROM M. THERMOAUTOTROPHICUM, ADOHCY BINARY COMPLEX

Keller, J.P., Smith, P.M., Benach, J., Christendat, D., deTitta, G., Hunt, J.F.

(2002) Structure 10: 1475-1487

Released	2002-11-27
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Precorrin-6y methyltransferase/putative decarboxylase (protein)
Unique Ligands	SAH

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1LUR \| pdb_00001lur	Download File View File

Crystal Structure of the GalM/aldose Epimerase Homologue from C. elegans, Northeast Structural Genomics Target WR66

Keller, J.P., Xiao, R., MacDonald, L., Shen, J., Acton, T., Montelione, G., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2003-07-29
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Caenorhabditis elegans
Macromolecule	aldose 1-epimerase (protein)
Unique Ligands	SO4

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1M6N \| pdb_00001m6n	Download File View File

Crystal structure of the SecA translocation ATPase from Bacillus subtilis

Hunt, J.F., Weinkauf, S., Henry, L., Fak, J.J., McNicholas, P., Oliver, D.B., Deisenhofer, J.

(2002) Science 297: 2018-2026

Released	2002-09-20
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Bacillus subtilis
Macromolecule	Preprotein translocase secA (protein)
Unique Ligands	SO4

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1M74 \| pdb_00001m74	Download File View File

Crystal structure of Mg-ADP-bound SecA from Bacillus subtilis

Hunt, J.F., Weinkauf, S., Henry, L., Fak, J.J., McNicholas, P., Oliver, D.B., Deisenhofer, J.

(2002) Science 297: 2018-2026

Released	2002-09-20
Method	X-RAY DIFFRACTION 3 Å
Organisms	Bacillus subtilis
Macromolecule	Preprotein translocase secA (protein)
Unique Ligands	ADP, MG, SO4

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1MW7 \| pdb_00001mw7	Download File View File

X-RAY STRUCTURE OF Y162_HELPY NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET PR6

Kuzin, A., Shen, J., Keller, J.P., Xiao, R., Rost, B., Montelione, G., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2003-01-28
Method	X-RAY DIFFRACTION 2 Å
Organisms	Helicobacter pylori
Macromolecule	HYPOTHETICAL PROTEIN HP0162 (protein)

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1MZG \| pdb_00001mzg	Download File View File

X-Ray Structure of SufE from E.coli Northeast Structural Genomics (NESG) Consortium Target ER30

Kuzin, A., Edstrom, W.C., Xiao, R., Acton, T.B., Rost, B., Tong, L., Montelione, G.T., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

(2004) J Mol Biology 344: 549-565

Released	2003-01-28
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	SufE Protein (protein)

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1MZH \| pdb_00001mzh	Download File View File

QR15, an Aldolase

Tan, A.Y., Smith, P.C., Shen, J., Xiao, R., Acton, T., Rost, B., Montelione, G., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2003-02-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Aquifex aeolicus
Macromolecule	Deoxyribose-phosphate aldolase (protein)
Unique Ligands	PO4

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1N4A \| pdb_00001n4a	Download File View File

The Ligand Bound Structure of E.coli BtuF, the Periplasmic Binding Protein for Vitamin B12

Karpowich, N.K., Smith, P.C., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

(2003) J Biological Chem 278: 8429-8434

Released	2003-03-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	Vitamin B12 transport protein btuF (protein)
Unique Ligands	CNC

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1N4D \| pdb_00001n4d	Download File View File

The Ligand-Free Structure of E coli BtuF, the Periplasmic Binding Protein for Vitamin B12

Karpowich, N., Smith, P.C., Hunt, J.F.

(2003) J Biological Chem 278: 8429-8434

Released	2003-03-11
Method	X-RAY DIFFRACTION 3 Å
Organisms	Escherichia coli
Macromolecule	Vitamin B12 transport protein btuF (protein)

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1NPD \| pdb_00001npd	Download File View File

X-RAY STRUCTURE OF SHIKIMATE DEHYDROGENASE COMPLEXED WITH NAD+ FROM E.COLI (YDIB) NORTHEAST STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NESG) TARGET ER24

Benach, J., Kuzin, A.P., Lee, I., Rost, B., Chiang, Y., Acton, T.B., Montelione, G.T., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

(2003) J Biological Chem 278: 19176-19182

Released	2003-01-28
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	HYPOTHETICAL SHIKIMATE 5-DEHYDROGENASE-LIKE PROTEIN YDIB (protein)
Unique Ligands	NAD