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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Ferreon, J."

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Homo sapiens (6)
	Mus musculus (4)
	human gammaherpesvirus 4 (4)
	Human herpesvirus 4 strain B95-8 (3)
	Hepacivirus hominis (2)
	Saguinus oedipus (2)
	Macaca fascicularis (1)

Taxonomy

	Eukaryota (11)
	Duplodnaviria (7)
	Riboviria (2)

Experimental Method

X-RAY DIFFRACTION (11)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (1)
	2.5 - 3.0 (2)
	3.0 - 3.5 (6)

Release Date

2020 - 2024 (11)

Enzyme Classification Name

	Hydrolases (2)
	Transferases (2)

Membrane Protein Annotation

OPM (1)

Symmetry Type

Asymmetric (11)

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1 to 11 of 11 Structures

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7MWS \| pdb_00007mws	Download File View File

Crystal structure of tamarin CD81 large extracellular loop

Kumar, A., Hossain, R.A., Yost, S.A., Bu, W., Wang, Y., Dearborn, A.D., Grakoui, A., Cohen, J.I., Marcotrigiano, J.

(2021) Nature 598: 521-525

Released	2021-09-15
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saguinus oedipus
Macromolecule	CD81 protein (protein)
Unique Ligands	GOL, PG4

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7MWW \| pdb_00007mww	Download File View File

Structure of hepatitis C virus envelope full-length glycoprotein 2 (eE2) from J6 genotype

Kumar, A., Hossain, R.A., Yost, S.A., Bu, W., Wang, Y., Dearborn, A.D., Grakoui, A., Cohen, J.I., Marcotrigiano, J.

(2021) Nature 598: 521-525

Released	2021-09-15
Method	X-RAY DIFFRACTION 2.71 Å
Organisms	Hepacivirus hominis Mus musculus
Macromolecule	2A12 Fab Heavy chain (protein) 2A12 Fab light chain (protein) Core protein precursor eE2 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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7MWX \| pdb_00007mwx	Download File View File

Structure of the core ectodomain of the hepatitis C virus envelope glycoprotein 2 with tamarin CD81

Kumar, A., Hossain, R.A., Yost, S.A., Bu, W., Wang, Y., Dearborn, A.D., Grakoui, A., Cohen, J.I., Marcotrigiano, J.

(2021) Nature 598: 521-525

Released	2021-09-15
Method	X-RAY DIFFRACTION 3.32 Å
Organisms	Hepacivirus hominis Mus musculus Saguinus oedipus
Macromolecule	2A12 Fab Heavy Chain (protein) 2A12 Fab Light Chain (protein) CD81 protein (protein) Core protein precursor eE2 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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7S07 \| pdb_00007s07	Download File View File

Crystal structure of Epstein-Barr virus glycoprotein gH/gL/gp42-peptide in complex with human neutralizing antibodies 769B10 and 769C2

Chen, W.-H., Kanekiyo, M., Cohen, J.I., Joyce, M.G.

(2022) Immunity 55: 2135-2148.e6

Released	2022-11-09
Method	X-RAY DIFFRACTION 3.29 Å
Organisms	Homo sapiens human gammaherpesvirus 4
Macromolecule	Unique protein chains: 7
Unique Ligands	NAG

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7S0J \| pdb_00007s0j	Download File View File

Crystal structure of Epstein-Barr virus gH/gL targeting antibody 769B10

Chen, W.-H., Kanekiyo, M., Cohen, J.I., Joyce, M.G.

(2022) Immunity 55: 2135-2148.e6

Released	2022-11-09
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens
Macromolecule	769B10 Fab Heavy chain (protein) 769B10 Fab Light chain (protein)
Unique Ligands	GOL

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7S1B \| pdb_00007s1b	Download File View File

Crystal structure of Epstein-Barr virus glycoproteins gH/gL/gp42-peptide in complex with human neutralizing antibodies 769C2 and 770F7

Chen, W.-H., Cohen, J.I., Kanekiyo, M., Joyce, M.G.

(2022) Immunity 55: 2135-2148.e6

Released	2022-11-09
Method	X-RAY DIFFRACTION 3.03 Å
Organisms	Homo sapiens human gammaherpesvirus 4
Macromolecule	Unique protein chains: 7
Unique Ligands	NAG

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8SM0 \| pdb_00008sm0	Download File View File

Crystal structure of human complement receptor 2 (CD21) in complex with Epstein-Barr virus major glycoprotein gp350

Chen, W.-H., Bu, W., Cohen, J.I., Kanekiyo, M., Joyce, M.G.

(2025) Immunity 58: 295

Released	2024-05-01
Method	X-RAY DIFFRACTION 1.68 Å
Organisms	Homo sapiens Human herpesvirus 4 strain B95-8
Macromolecule	Complement receptor type 2 (protein) Envelope glycoprotein gp350 (protein)
Unique Ligands	NAG, SO4

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8SM1 \| pdb_00008sm1	Download File View File

CRYSTAL STRUCTURE OF HUMAN ANTIBODY 769A9 IN COMPLEX WITH EPSTEIN-BARR VIRUS MAJOR GLYCOPROTEIN GP350

Chen, W.-H., Bu, W., Cohen, J.I., Kanekiyo, M., Joyce, M.G.

(2025) Immunity 58: 295

Released	2024-05-01
Method	X-RAY DIFFRACTION 3.29 Å
Organisms	Homo sapiens Human herpesvirus 4 strain B95-8
Macromolecule	769A9 Fab heavy chain (protein) 769A9 Fab light chain (protein) Envelope glycoprotein gp350 (protein)
Unique Ligands	GOL, NAG

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8TNN \| pdb_00008tnn	Download File View File

Crystal structure of Epstein-Barr virus gH/gL/gp42 in complex with gp42 antibody A10

Bu, W., Kumar, A., Board, N., Kim, J., Dowdell, K., Zhang, S., Lei, Y., Hostal, A., Krogmann, T., Wang, Y., Pittaluga, S., Marcotrigiano, J., Cohen, J.I.

(2024) Immunity 57: 559-573.e6

Released	2024-03-27
Method	X-RAY DIFFRACTION 3.36 Å
Organisms	Human herpesvirus 4 strain B95-8 Macaca fascicularis
Macromolecule	A10 heavy chain (protein) A10 light chain (protein) Envelope glycoprotein H (protein) Envelope glycoprotein L (protein) Glycoprotein 42 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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8TNT \| pdb_00008tnt	Download File View File

Crystal structure of Epstein-Barr virus gH/gL/gp42 in complex with antibodies F-2-1 and 769C2

Bu, W., Kumar, A., Board, N., Kim, J., Dowdell, K., Zhang, S., Lei, Y., Hostal, A., Krogmann, T., Wang, Y., Pittaluga, S., Marcotrigiano, J., Cohen, J.I.

(2024) Immunity 57: 559-573.e6

Released	2024-03-27
Method	X-RAY DIFFRACTION 3.15 Å
Organisms	Homo sapiens Mus musculus human gammaherpesvirus 4
Macromolecule	Unique protein chains: 7
Unique Ligands	NAG

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8TOO \| pdb_00008too	Download File View File

Crystal structure of Epstein-Barr virus gp42 in complex with antibody 4C12

Bu, W., Kumar, A., Board, N., Kim, J., Dowdell, K., Zhang, S., Lei, Y., Hostal, A., Krogmann, T., Wang, Y., Pittaluga, S., Marcotrigiano, J., Cohen, J.I.

(2024) Immunity 57: 559-573.e6

Released	2024-03-27
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Mus musculus human gammaherpesvirus 4
Macromolecule	4C12 heavy chain (protein) 4C12 light chain (protein) Glycoprotein 42 (protein)

1 to 11 of 11 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

7MWS | pdb_00007mws

Crystal structure of tamarin CD81 large extracellular loop

7MWW | pdb_00007mww

Structure of hepatitis C virus envelope full-length glycoprotein 2 (eE2) from J6 genotype

7MWX | pdb_00007mwx

Structure of the core ectodomain of the hepatitis C virus envelope glycoprotein 2 with tamarin CD81

7S07 | pdb_00007s07

Crystal structure of Epstein-Barr virus glycoprotein gH/gL/gp42-peptide in complex with human neutralizing antibodies 769B10 and 769C2

7S0J | pdb_00007s0j

Crystal structure of Epstein-Barr virus gH/gL targeting antibody 769B10

7S1B | pdb_00007s1b

Crystal structure of Epstein-Barr virus glycoproteins gH/gL/gp42-peptide in complex with human neutralizing antibodies 769C2 and 770F7

8SM0 | pdb_00008sm0

Crystal structure of human complement receptor 2 (CD21) in complex with Epstein-Barr virus major glycoprotein gp350

8SM1 | pdb_00008sm1

CRYSTAL STRUCTURE OF HUMAN ANTIBODY 769A9 IN COMPLEX WITH EPSTEIN-BARR VIRUS MAJOR GLYCOPROTEIN GP350

8TNN | pdb_00008tnn

Crystal structure of Epstein-Barr virus gH/gL/gp42 in complex with gp42 antibody A10

8TNT | pdb_00008tnt

Crystal structure of Epstein-Barr virus gH/gL/gp42 in complex with antibodies F-2-1 and 769C2

8TOO | pdb_00008too

Crystal structure of Epstein-Barr virus gp42 in complex with antibody 4C12

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

7MWS | pdb_00007mws

7MWW | pdb_00007mww

7MWX | pdb_00007mwx

7S07 | pdb_00007s07

7S0J | pdb_00007s0j

7S1B | pdb_00007s1b

8SM0 | pdb_00008sm0

8SM1 | pdb_00008sm1

8TNN | pdb_00008tnn

8TNT | pdb_00008tnt

8TOO | pdb_00008too