GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 8GZV designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 8GZV_GDP_A_401 | 77% | 42% | 0.107 | 0.945 | 0.91 | 1.33 | 1 | 4 | 1 | 0 | 100% | 1 |
| 6LL5_GDP_A_401 | 91% | 40% | 0.075 | 0.961 | 0.97 | 1.37 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8GZX_GDP_A_401 | 86% | 47% | 0.09 | 0.959 | 1 | 1.05 | 1 | 4 | 0 | 0 | 100% | 1 |
| 6LL6_GDP_A_401 | 79% | 45% | 0.119 | 0.965 | 0.9 | 1.2 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8GZW_GDP_C_401 | 76% | 43% | 0.135 | 0.973 | 0.93 | 1.26 | - | 2 | 0 | 0 | 100% | 1 |
| 8GZY_GDP_E_401 | 72% | 41% | 0.145 | 0.968 | 0.97 | 1.33 | - | 5 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
