8GYI | pdb_00008gyi


PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 8GYI designated by the Author
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8GYI_PLP_A_506Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8GYI_PLP_A_506Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
8GYI_PLP_A_506 89% 49% 0.099 0.9790.54 1.41 - 300100%1
8GYI_PLP_B_902 85% 47% 0.104 0.9690.54 1.48 - 400100%1
3CEJ_PLP_A_832 100% 41% 0.021 0.9981.23 1.05 1 280100%1
3CEM_PLP_A_832 100% 41% 0.021 0.9971.24 1.04 2 210100%1
4PPM_PLP_A_902 100% 7% 0.019 0.9982.88 1.91 9 600100%1
1EKV_PLP_A_370 100% 19% 0.019 0.9982 1.45 5 41094%1
3WQC_PLP_B_402 100% 21% 0.026 0.9961.96 1.38 4 400100%1