Ligand validation:6CXF


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 6CXF designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6CXF_NAG_A_302Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6CXF_NAG_A_302Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6CXF_NAG_A_302Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
6CXF_NAG_A_302 59% 55% 0.136 0.9170.61 1.13 - 200100%0.9333
6CXF_NAG_A_301 31% 54% 0.22 0.890.48 1.28 - 100100%0.9333
2AKR_NAG_C_501 93% 44% 0.072 0.9670.79 1.35 - 200100%0.9333
2Q7Y_NAG_C_501 91% 50% 0.086 0.9710.66 1.26 - 200100%0.9333
3RUG_NAG_A_307 79% 54% 0.103 0.9480.43 1.32 - 100100%0.9333
6CXE_NAG_A_302 73% 49% 0.098 0.9240.75 1.2 - 100100%0.9333
6C6J_NAG_A_302 71% 72% 0.103 0.9240.24 0.84 - -00100%0.9333
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%0.9333
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%0.9333
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%0.9333
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%0.9333
3GXM_NAG_A_498 100% 45% 0.026 0.9920.75 1.34 - 200100%0.9333