Ligand validation:5KAI

SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

SQD is a Ligand Of Interest in 5KAI designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5KAI_SQD_A_612	39%	33%	0.206	0.918	0.96	1.67	5	12	0	0	96%	0.963
5KAI_SQD_a_714	38%	34%	0.217	0.918	0.95	1.63	5	12	0	0	100%	1
5KAI_SQD_B_626	24%	32%	0.25	0.882	0.95	1.71	5	10	0	0	100%	1
5KAI_SQD_b_601	19%	32%	0.238	0.831	0.94	1.72	3	10	0	0	100%	1
5KAI_SQD_A_614	16%	46%	0.223	0.837	0.88	1.2	2	3	0	0	74%	0.7407
5KAI_SQD_D_410	14%	32%	0.291	0.881	1.06	1.63	5	10	0	0	80%	0.7963
5KAI_SQD_f_102	11%	32%	0.301	0.866	1.09	1.6	5	9	0	0	76%	0.7593
5KAI_SQD_B_623	6%	29%	0.269	0.736	1.01	1.82	3	12	0	0	87%	0.8704
5KAI_SQD_I_102	1%	46%	0.485	0.648	0.86	1.22	2	2	0	0	74%	0.7407
5V2C_SQD_a_413	94%	21%	0.075	0.976	1.12	2.14	4	12	0	0	100%	1
5GTI_SQD_A_409	91%	29%	0.066	0.95	0.98	1.84	3	13	0	0	100%	1
5WS6_SQD_A_411	87%	32%	0.084	0.954	0.88	1.78	2	12	0	0	100%	1
6DHE_SQD_A_412	78%	20%	0.113	0.961	1.05	2.27	5	14	0	0	96%	0.963
8IRC_SQD_a_411	77%	29%	0.119	0.96	0.96	1.83	3	13	0	0	100%	1
8IR5_SQD_a_411	76%	31%	0.123	0.958	0.95	1.77	3	13	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.