Ligand validation:4RKU

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 4RKU designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4RKU_CLA_B_9010	78%	7%	0.103	0.945	2.2	2.61	16	25	14	1	100%	1
4RKU_CLA_B_1239	78%	6%	0.099	0.94	2.16	2.81	15	27	7	1	100%	1
4RKU_CLA_B_1226	77%	7%	0.104	0.942	2.14	2.69	17	22	3	1	100%	1
4RKU_CLA_B_1205	72%	6%	0.114	0.937	2.43	2.52	20	23	4	1	100%	1
4RKU_CLA_B_1235	71%	7%	0.113	0.933	2.42	2.5	19	23	7	1	100%	1
4RKU_CLA_B_1225	69%	7%	0.118	0.932	2.45	2.44	19	23	6	1	100%	1
4RKU_CLA_B_1238	68%	7%	0.116	0.927	2.44	2.47	19	23	3	1	100%	1
4RKU_CLA_B_1203	67%	6%	0.113	0.933	2.54	2.55	20	21	2	1	92%	0.9231
4RKU_CLA_B_1204	66%	5%	0.1	0.932	2.66	2.65	20	23	3	1	85%	0.8462
4RKU_CLA_B_1220	65%	7%	0.13	0.933	2.45	2.48	20	25	8	1	100%	1
4RKU_CLA_B_1229	63%	7%	0.136	0.93	2.44	2.49	21	22	8	1	100%	1
4RKU_CLA_A_1131	62%	7%	0.119	0.912	2.28	2.56	17	23	4	1	100%	1
4RKU_CLA_A_1132	62%	7%	0.123	0.916	2.31	2.45	17	24	13	1	100%	1
4RKU_CLA_A_1138	62%	7%	0.127	0.92	2.44	2.47	19	23	9	1	100%	1
4RKU_CLA_B_1228	62%	5%	0.097	0.928	2.49	2.89	19	24	4	1	78%	0.7846
4RKU_CLA_B_1201	62%	4%	0.087	0.931	2.98	2.79	20	21	1	1	71%	0.7077
4RKU_CLA_B_1202	62%	6%	0.133	0.925	2.43	2.51	20	21	2	1	100%	1
4RKU_CLA_B_1206	60%	7%	0.134	0.92	2.41	2.52	20	25	13	1	100%	1
4RKU_CLA_B_1227	59%	7%	0.117	0.898	2.19	2.65	16	24	24	1	100%	1
4RKU_CLA_1_1004	59%	7%	0.125	0.906	2.26	2.48	18	21	24	1	100%	1
4RKU_CLA_B_9022	59%	7%	0.128	0.908	2.33	2.45	18	30	8	1	100%	1
4RKU_CLA_B_9023	58%	7%	0.125	0.904	2.21	2.52	19	29	7	1	100%	1
4RKU_CLA_A_1139	58%	7%	0.13	0.909	2.44	2.45	19	22	1	1	100%	1
4RKU_CLA_B_1211	58%	6%	0.122	0.9	2.44	2.5	19	24	3	1	100%	1
4RKU_CLA_A_1101	58%	6%	0.132	0.91	2.43	2.52	19	22	5	1	100%	1
4RKU_CLA_B_1207	58%	6%	0.126	0.903	2.44	2.54	20	24	13	1	100%	1
4RKU_CLA_4_4012	58%	7%	0.134	0.911	2.21	2.58	17	23	18	1	100%	1
4RKU_CLA_B_1223	57%	6%	0.136	0.91	2.44	2.54	20	25	4	1	100%	1
4RKU_CLA_B_1222	56%	7%	0.138	0.908	2.43	2.5	19	24	6	1	100%	1
4RKU_CLA_A_1102	55%	4%	0.099	0.909	2.79	2.87	20	22	6	1	77%	0.7692
4RKU_CLA_B_1240	55%	7%	0.123	0.89	2.24	2.67	17	31	16	1	100%	1
4RKU_CLA_B_1216	54%	7%	0.127	0.892	2.42	2.42	19	23	3	1	100%	1
4RKU_CLA_B_1210	53%	6%	0.149	0.911	2.48	2.51	19	24	6	1	100%	1
4RKU_CLA_B_1214	53%	5%	0.141	0.919	2.55	2.65	19	23	5	1	91%	0.9077
4RKU_CLA_B_1236	53%	5%	0.133	0.921	2.64	2.71	20	22	4	1	85%	0.8462
4RKU_CLA_B_1224	53%	7%	0.153	0.913	2.43	2.47	19	22	5	1	100%	1
4RKU_CLA_A_1117	53%	7%	0.165	0.925	2.45	2.45	19	24	4	1	100%	1
4RKU_CLA_4_4003	52%	8%	0.118	0.876	2.29	2.37	18	24	28	1	100%	1
4RKU_CLA_A_9013	52%	7%	0.152	0.911	2.18	2.68	15	29	9	1	100%	1
4RKU_CLA_B_1221	52%	5%	0.135	0.922	2.69	2.78	20	23	6	1	83%	0.8308
4RKU_CLA_4_4004	51%	7%	0.137	0.892	2.22	2.6	18	25	35	1	100%	1
4RKU_CLA_A_1140	51%	7%	0.138	0.893	2.46	2.46	20	22	4	1	100%	1
4RKU_CLA_A_1130	51%	4%	0.115	0.919	2.94	2.76	20	20	17	1	71%	0.7077
4RKU_CLA_1_1005	51%	6%	0.113	0.889	2.39	2.76	17	24	14	1	86%	0.8615
4RKU_CLA_A_1124	50%	5%	0.125	0.904	2.66	2.67	19	23	9	1	85%	0.8462
4RKU_CLA_A_1103	50%	7%	0.157	0.908	2.43	2.46	19	24	5	1	100%	1
4RKU_CLA_A_1127	50%	7%	0.162	0.913	2.44	2.46	19	22	4	1	100%	1
4RKU_CLA_F_1303	50%	8%	0.134	0.886	2.27	2.36	18	25	12	1	98%	0.9846
4RKU_CLA_L_1502	50%	7%	0.148	0.897	2.4	2.52	20	23	7	1	100%	1
4RKU_CLA_B_1230	50%	5%	0.137	0.905	2.56	2.71	20	24	4	1	89%	0.8923
4RKU_CLA_A_1105	49%	4%	0.113	0.898	2.78	2.81	21	23	2	1	78%	0.7846
4RKU_CLA_4_4011	49%	7%	0.148	0.893	2.17	2.61	17	24	6	1	100%	1
4RKU_CLA_B_1234	48%	6%	0.141	0.897	2.56	2.57	20	23	6	1	92%	0.9231
4RKU_CLA_4_4009	48%	4%	0.12	0.903	2.52	3.04	16	21	9	1	77%	0.7692
4RKU_CLA_A_1122	48%	5%	0.135	0.893	2.57	2.66	19	22	5	1	91%	0.9077
4RKU_CLA_A_1125	47%	5%	0.13	0.897	2.38	2.89	17	26	15	1	85%	0.8462
4RKU_CLA_A_1135	47%	4%	0.121	0.898	2.75	2.84	19	23	5	0	78%	0.7846
4RKU_CLA_A_1106	47%	6%	0.156	0.895	2.43	2.52	19	24	9	1	100%	1
4RKU_CLA_B_1209	47%	4%	0.117	0.907	2.97	2.76	21	20	5	1	71%	0.7077
4RKU_CLA_1_1001	47%	5%	0.13	0.894	2.46	2.85	16	26	70	1	85%	0.8462
4RKU_CLA_B_1218	46%	5%	0.143	0.893	2.53	2.66	20	22	2	1	92%	0.9231
4RKU_CLA_4_4013	46%	5%	0.108	0.88	2.48	2.94	17	22	13	1	78%	0.7846
4RKU_CLA_A_9012	46%	7%	0.16	0.894	2.34	2.5	19	27	17	1	100%	1
4RKU_CLA_A_1104	45%	6%	0.173	0.906	2.42	2.52	20	22	5	1	100%	1
4RKU_CLA_L_1501	45%	4%	0.109	0.892	2.93	2.8	20	20	19	1	71%	0.7077
4RKU_CLA_A_1123	45%	6%	0.169	0.9	2.47	2.53	21	24	5	1	100%	1
4RKU_CLA_A_1137	44%	5%	0.163	0.92	2.64	2.72	19	25	7	1	85%	0.8462
4RKU_CLA_1_1003	43%	7%	0.137	0.861	2.25	2.56	16	27	42	1	100%	1
4RKU_CLA_B_1237	42%	6%	0.147	0.879	2.53	2.57	19	22	0	1	92%	0.9231
4RKU_CLA_A_1129	42%	4%	0.134	0.893	2.75	2.83	19	23	19	1	77%	0.7692
4RKU_CLA_B_1215	42%	6%	0.164	0.896	2.53	2.54	19	23	2	1	92%	0.9231
4RKU_CLA_B_1208	42%	5%	0.14	0.885	2.67	2.67	21	21	5	1	85%	0.8462
4RKU_CLA_2_2012	41%	7%	0.148	0.863	2.18	2.57	17	23	21	1	100%	1
4RKU_CLA_A_1116	41%	5%	0.161	0.905	2.67	2.69	20	22	2	1	83%	0.8308
4RKU_CLA_A_1111	40%	6%	0.162	0.887	2.53	2.63	19	23	5	1	92%	0.9231
4RKU_CLA_B_1219	40%	6%	0.164	0.887	2.52	2.5	19	23	5	1	92%	0.9231
4RKU_CLA_1_1008	39%	7%	0.147	0.853	2.19	2.53	19	22	7	1	100%	1
4RKU_CLA_A_1119	39%	7%	0.182	0.888	2.44	2.44	19	22	3	1	100%	1
4RKU_CLA_B_1231	39%	4%	0.11	0.866	2.98	2.79	20	22	3	1	71%	0.7077
4RKU_CLA_B_1217	38%	4%	0.14	0.895	2.97	2.76	20	21	5	1	71%	0.7077
4RKU_CLA_B_1213	38%	6%	0.155	0.87	2.35	2.62	18	24	10	1	92%	0.9231
4RKU_CLA_A_1109	37%	6%	0.166	0.865	2.43	2.51	19	23	6	1	100%	1
4RKU_CLA_1_1012	37%	4%	0.144	0.884	2.6	2.9	17	26	23	1	77%	0.7692
4RKU_CLA_1_1007	37%	5%	0.14	0.864	2.47	2.87	20	27	18	1	85%	0.8462
4RKU_CLA_A_1128	37%	7%	0.177	0.874	2.38	2.52	19	24	11	1	100%	1
4RKU_CLA_F_1301	37%	4%	0.132	0.883	2.82	2.81	18	19	2	1	69%	0.6923
4RKU_CLA_2_2013	37%	7%	0.131	0.825	2.17	2.62	17	28	12	1	100%	1
4RKU_CLA_2_2005	36%	7%	0.153	0.847	2.2	2.63	17	24	19	1	100%	1
4RKU_CLA_A_1136	36%	6%	0.174	0.865	2.44	2.52	19	24	5	1	100%	1
4RKU_CLA_4_4015	35%	4%	0.132	0.87	2.74	2.8	16	23	13	1	71%	0.7077
4RKU_CLA_A_1113	33%	4%	0.151	0.879	2.99	2.77	20	19	1	1	71%	0.7077
4RKU_CLA_2_2004	32%	5%	0.159	0.846	2.54	2.71	19	22	30	1	91%	0.9077
4RKU_CLA_F_1302	30%	4%	0.132	0.846	2.99	2.71	20	19	3	1	71%	0.7077
4RKU_CLA_A_1133	30%	4%	0.155	0.869	2.8	2.85	18	23	4	1	71%	0.7077
4RKU_CLA_4_4008	29%	3%	0.127	0.831	2.62	3.36	15	27	16	1	74%	0.7385
4RKU_CLA_A_1112	29%	4%	0.148	0.857	2.99	2.77	20	21	3	1	71%	0.7077
4RKU_CLA_A_1134	28%	4%	0.14	0.846	2.99	2.78	20	20	0	1	71%	0.7077
4RKU_CLA_A_1118	28%	4%	0.16	0.866	2.95	2.91	20	23	4	1	71%	0.7077
4RKU_CLA_L_1503	28%	4%	0.145	0.836	2.75	2.83	20	23	11	1	77%	0.7692
4RKU_CLA_1_1002	27%	5%	0.156	0.825	2.46	2.83	14	23	45	1	86%	0.8615
4RKU_CLA_A_1114	27%	4%	0.14	0.835	3.01	2.77	19	20	1	1	71%	0.7077
4RKU_CLA_A_1126	26%	7%	0.236	0.881	2.43	2.48	20	25	13	1	100%	1
4RKU_CLA_B_1212	26%	4%	0.144	0.834	2.99	2.76	20	21	2	1	71%	0.7077
4RKU_CLA_1_1011	26%	6%	0.19	0.828	2.24	2.82	17	29	10	1	100%	1
4RKU_CLA_A_1108	23%	4%	0.141	0.817	2.99	2.76	19	21	4	1	71%	0.7077
4RKU_CLA_2_2001	23%	2%	0.145	0.87	3.17	3.61	13	16	19	1	42%	0.4154
4RKU_CLA_A_1121	23%	4%	0.152	0.824	2.96	2.84	20	18	1	1	71%	0.7077
4RKU_CLA_A_1107	22%	4%	0.194	0.851	2.79	2.87	20	26	6	1	78%	0.7846
4RKU_CLA_G_1002	22%	4%	0.142	0.809	2.73	2.99	16	26	32	1	71%	0.7077
4RKU_CLA_G_1001	21%	4%	0.132	0.765	2.41	3.1	17	27	7	1	85%	0.8462
4RKU_CLA_A_1115	20%	5%	0.178	0.804	2.64	2.61	20	22	5	1	86%	0.8615
4RKU_CLA_2_2011	20%	6%	0.178	0.791	2.32	2.77	17	25	11	1	92%	0.9231
4RKU_CLA_4_4002	20%	4%	0.162	0.785	2.41	3.12	18	25	35	1	86%	0.8615
4RKU_CLA_4_4001	19%	7%	0.187	0.782	2.29	2.56	18	25	47	1	100%	1
4RKU_CLA_H_1000	18%	4%	0.162	0.802	2.96	2.81	20	21	4	1	71%	0.7077
4RKU_CLA_4_4010	17%	4%	0.164	0.786	2.54	3.03	16	28	8	1	77%	0.7692
4RKU_CLA_A_1141	15%	4%	0.156	0.755	2.78	2.78	20	23	3	1	78%	0.7846
4RKU_CLA_1_1010	15%	7%	0.195	0.751	2.23	2.54	17	21	7	1	100%	1
4RKU_CLA_4_4014	14%	4%	0.158	0.763	2.76	2.85	17	25	21	1	69%	0.6923
4RKU_CLA_2_2009	14%	4%	0.154	0.755	2.72	2.86	17	21	19	1	71%	0.7077
4RKU_CLA_1_1009	13%	6%	0.209	0.749	2.25	2.84	18	27	52	1	100%	1
4RKU_CLA_2_2002	12%	6%	0.185	0.728	2.35	2.81	17	26	35	1	92%	0.9231
4RKU_CLA_2_2007	11%	5%	0.184	0.727	2.44	2.74	18	27	6	1	85%	0.8462
4RKU_CLA_2_2010	9%	7%	0.166	0.65	2.32	2.48	17	23	9	1	100%	1
4RKU_CLA_3_3009	9%	3%	0.205	0.74	2.82	3.1	18	25	6	1	71%	0.7077
4RKU_CLA_A_1120	8%	4%	0.18	0.712	2.99	2.74	19	19	2	1	71%	0.7077
4RKU_CLA_A_1110	8%	5%	0.27	0.779	2.62	2.67	19	25	2	1	85%	0.8462
4RKU_CLA_3_3008	7%	7%	0.17	0.62	2.28	2.61	18	22	5	1	100%	1
4RKU_CLA_3_3012	6%	3%	0.189	0.683	2.63	3.27	17	26	21	1	69%	0.6923
4RKU_CLA_3_3011	6%	4%	0.176	0.659	2.83	2.95	18	20	20	1	71%	0.7077
4RKU_CLA_3_3013	6%	4%	0.192	0.664	2.69	2.95	19	24	7	1	77%	0.7692
4RKU_CLA_1_1013	6%	7%	0.194	0.619	2.24	2.67	17	28	46	1	100%	1
4RKU_CLA_4_4006	4%	6%	0.227	0.615	2.14	3.01	16	31	15	1	100%	1
4RKU_CLA_3_3002	4%	5%	0.205	0.615	2.67	2.78	19	24	1	1	85%	0.8462
4RKU_CLA_J_1302	3%	6%	0.224	0.583	2.54	2.53	19	23	1	1	94%	0.9385
4RKU_CLA_1_1006	3%	4%	0.209	0.605	2.74	3.05	18	24	56	1	72%	0.7231
4RKU_CLA_2_2003	3%	6%	0.188	0.53	2.36	2.75	21	23	19	1	100%	1
4RKU_CLA_3_3001	3%	6%	0.278	0.618	2.4	2.6	21	24	21	1	100%	1
4RKU_CLA_2_2014	3%	4%	0.184	0.56	2.65	3.14	15	23	12	1	69%	0.6923
4RKU_CLA_A_1143	3%	4%	0.178	0.55	2.85	2.79	18	19	0	1	71%	0.7077
4RKU_CLA_3_3017	3%	4%	0.194	0.557	2.84	2.94	18	20	5	1	69%	0.6923
4RKU_CLA_3_3010	2%	4%	0.191	0.53	2.56	2.97	18	28	6	1	80%	0.8
4RKU_CLA_3_3014	2%	4%	0.239	0.577	2.76	3.02	17	21	4	1	69%	0.6923
4RKU_CLA_4_4005	2%	3%	0.251	0.574	2.61	3.38	17	28	38	1	69%	0.6923
4RKU_CLA_3_3003	2%	5%	0.271	0.54	2.51	2.68	20	24	10	1	92%	0.9231
4RKU_CLA_1_1014	2%	4%	0.203	0.508	2.74	2.97	19	21	27	1	69%	0.6923
4RKU_CLA_2_2008	2%	6%	0.218	0.461	2.3	2.7	17	28	10	1	100%	1
4RKU_CLA_2_2006	1%	5%	0.204	0.438	2.55	2.75	19	22	16	1	88%	0.8769
4RKU_CLA_4_4007	1%	7%	0.269	0.445	2.31	2.52	18	20	8	1	100%	1
4RKU_CLA_3_3006	1%	7%	0.272	0.443	2.46	2.45	19	24	2	1	100%	1
4RKU_CLA_J_6015	1%	5%	0.228	0.407	2.62	2.7	20	22	7	1	85%	0.8462
4RKU_CLA_A_1142	1%	4%	0.182	0.388	2.78	2.88	17	21	0	1	68%	0.6769
4RKU_CLA_3_3016	1%	4%	0.163	0.361	2.86	2.79	18	20	0	1	69%	0.6923
4RKU_CLA_J_6014	1%	6%	0.196	0.345	2.53	2.55	21	21	1	1	94%	0.9385
4RKU_CLA_3_3015	1%	4%	0.176	0.315	2.85	2.8	18	19	0	1	69%	0.6923
4RKU_CLA_3_3004	0%	4%	0.275	0.304	2.85	2.82	19	19	0	1	69%	0.6923
4RKU_CLA_3_3005	0%	4%	0.247	0.246	2.85	2.83	18	20	4	1	69%	0.6923
4XK8_CLA_b_803	92%	8%	0.072	0.963	2.07	2.52	16	26	0	1	100%	1
5L8R_CLA_A_839	92%	25%	0.078	0.969	1.32	1.73	6	11	5	1	100%	1
4Y28_CLA_B_1235	84%	6%	0.094	0.955	2.36	2.64	19	22	1	1	100%	1
7DKZ_CLA_A_808	72%	27%	0.153	0.977	1.36	1.59	8	11	4	1	100%	1
6ZXS_CLA_1_5012	58%	15%	0.12	0.952	1.62	2.11	9	13	2	1	71%	0.7077
5GTI_CLA_a_405	100%	7%	0.036	0.982	2.11	2.77	15	30	0	1	100%	1
5V2C_CLA_B_604	99%	14%	0.049	0.986	1.64	2.25	13	20	0	1	100%	1
2D2C_CLA_O_1201	99%	10%	0.057	0.991	2.34	1.98	19	15	7	4	100%	1
5B5E_CLA_A_405	99%	11%	0.046	0.976	1.9	2.26	16	28	0	0	100%	1
5WS6_CLA_a_350	99%	7%	0.048	0.975	2.04	2.76	15	26	0	1	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

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4RKU

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 4RKU designated by the RCSB