U5P: URIDINE-5'-MONOPHOSPHATE
U5P is a Ligand Of Interest in 3ERC designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3ERC_U5P_C_600 | 29% | 71% | 0.109 | 0.772 | 0.48 | 0.64 | - | 1 | 2 | 0 | 95% | 0.9524 |
3ERC_U5P_D_602 | 26% | 74% | 0.116 | 0.764 | 0.44 | 0.56 | - | 1 | 2 | 0 | 95% | 0.9524 |
3G1X_U5P_A_229 | 100% | 48% | 0.021 | 0.996 | 1.08 | 0.92 | 1 | 2 | 0 | 0 | 100% | 1 |
4MML_U5P_A_103 | 100% | 83% | 0.026 | 0.994 | 0.29 | 0.49 | - | - | 1 | 0 | 95% | 0.9524 |
3W07_U5P_A_301 | 100% | 55% | 0.037 | 0.997 | 0.79 | 0.96 | - | - | 3 | 0 | 100% | 1 |
6YWU_U5P_A_501 | 100% | 40% | 0.036 | 0.994 | 1.2 | 1.13 | 2 | 1 | 0 | 0 | 100% | 1 |
2E6Y_U5P_B_302 | 100% | 49% | 0.04 | 0.993 | 1.11 | 0.85 | 1 | 1 | 1 | 0 | 100% | 1 |