The solution structure of a protein-protein interaction module from a family 84 glycoside hydrolase of Clostridium perfringens
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D c13-edited noesy-hsqc | 1mM U-15N,13C x82, 25mM hepes, 50mM nacl, 5mM cacl2, pH 7.0 | 7.0 | 1 atm | 298 | |||
2 | hcch-tocsy | 1mM U-15N,13C x82, 25mM hepes, 50mM nacl, 5mM cacl2, pH 7.0 | 7.0 | 1 atm | 298 | |||
3 | 3D HNCACB | 1mM U-15N,13C x82, 25mM hepes, 50mM nacl, 5mM cacl2, pH 7.0 | 7.0 | 1 atm | 298 | |||
4 | 3D CBCA(CO)NH | 1mM U-15N,13C x82, 25mM hepes, 50mM nacl, 5mM cacl2, pH 7.0 | 7.0 | 1 atm | 298 | |||
5 | 3D C(CO)NH | 1mM U-15N,13C x82, 25mM hepes, 50mM nacl, 5mM cacl2, pH 7.0 | 7.0 | 1 atm | 298 | |||
6 | 3D H(CCO)NH | 1mM U-15N,13C x82, 25mM hepes, 50mM nacl, 5mM cacl2, pH 7.0 | 7.0 | 1 atm | 298 | |||
7 | 3D n15-edited noesy-hsqc | 1mM U-15N,13C x82, 25mM hepes, 50mM nacl, 5mM cacl2, pH 7.0 | 7.0 | 1 atm | 298 | |||
8 | 3D HNHA | 1mM U-15N,13C x82, 25mM hepes, 50mM nacl, 5mM cacl2, pH 7.0 | 7.0 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 800 |
2 | Varian | INOVA | 600 |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | Delaglio, F. et al. | |
2 | data analysis | NMRView | Johnson, B.A. et al. | |
3 | refinement | CNS | Brunger, A.T. et al. |