Solution structure of the N-terminal domain of Synechococcus elongatus SasA (25-structures ensemble)
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 4D_13C/15N-separated_NOESY | 0.8mM N-SasA U-15N, 13C, 20mM phosphate buffer pH 7.0, 100mM NaCl, 95% H2O, 5% D2O | 95% H2O/5% D2O | 100 mM NaCl, 20 mM NaPi | 7.0 | ambient | 298 | |
2 | 4D_13C-separated_NOESY | 0.8mM N-SasA U-15N, 13C, 20mM phosphate buffer pH 7.0, 100mM NaCl | 100% D2O | 100 mM NaCl, 20 mM NaPi | 7.0 | ambient | 298 | |
3 | 3D_15N-separated_NOESY | 0.8mM N-SasA U-15N, 20mM phosphate buffer pH 7.0, 100mM NaCl, 95% H2O, 5% D2O | 95% H2O/5% D2O | 100 mM NaCl, 20 mM NaPi | 7.0 | ambient | 298 | |
4 | HNHA | 0.8mM N-SasA U-15N, 20mM phosphate buffer pH 7.0, 100mM NaCl, 95% H2O, 5% D2O | 95% H2O/5% D2O | 100 mM NaCl, 20 mM NaPi | 7.0 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
2 | Varian | INOVA | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
distance geometry, simulated annealing, slow refinement in the presence of database potentials | The structure is based on 2267 restraints, 1764 were NOE, 197 dihedral angles, 71 couplings, 198 chemical shifts and 34 hydrogen bonds | VNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 25 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
---|---|
Details | The structure was determined using triple-resonance NMR spectroscopy. |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | VNMR | 6.1 Rev. C | Varian Assoc. |
2 | processing | NMRPipe | 2.1 Rev. 2002.044.17.08 | Delaglio |
3 | data analysis | PIPP | 4.2.6 | Garrett |
4 | structure solution | XPLOR-NIH | 2.9.1 | Clore, Kuszewski |
5 | refinement | XPLOR-NIH | 2.9.1 | Clore, Kuszewski |