8HK5 | pdb_00008hk5

C5aR1-Gi-C5a protein complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyG protein-coupled receptor-like 8091170 3000473 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyAnaphylotoxins (complement system) 8037606 3000387 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRas-like P-loop GTPases 8056779 3002022 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe8hk5A1 A: alpha bundlesX: Family A G protein-coupled receptor-like (From Topology)H: Family A G protein-coupled receptor-like (From Topology)T: Family A G protein-coupled receptor-likeF: F_UNCLASSIFIEDECOD (1.6)
BF_UNCLASSIFIEDe8hk5B1 A: few secondary structure elementsX: Anaphylotoxins (complement system) (From Topology)H: Anaphylotoxins (complement system) (From Topology)T: Anaphylotoxins (complement system)F: F_UNCLASSIFIEDECOD (1.6)
DF_UNCLASSIFIEDe8hk5D1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: F_UNCLASSIFIEDECOD (1.6)
E [auth G]F_UNCLASSIFIEDe8hk5G1 A: extended segmentsX: Transducin (heterotrimeric G protein), gamma chain (From Topology)H: Transducin (heterotrimeric G protein), gamma chain (From Topology)T: Transducin (heterotrimeric G protein), gamma chainF: F_UNCLASSIFIEDECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.1070.10 Mainly Alpha Up-down Bundle Rhopdopsin 7-helix transmembrane proteins Rhodopsin 7-helix transmembrane proteinsCATH (utative)
D2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF000017 transmembrane receptor (rhodopsin family) (7tm_1)7 transmembrane receptor (rhodopsin family)This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GC ...Domain
PF01821Anaphylotoxin-like domain (ANATO)Anaphylotoxin-like domainC3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins. ...Domain
PF00503G-protein alpha subunit (G-alpha)G-protein alpha subunitG proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like ...Domain
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C5a anaphylatoxin chemotactic receptor 1
Complement C5
Guanine nucleotide-binding protein G(i) subunit alpha-1
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
E [auth G]Guanine nucleotide-binding protein subunit gamma

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR002234Anaphylatoxin chemotactic receptor, C3a/C5a1/C5a2Family
IPR000276G protein-coupled receptor, rhodopsin-likeFamily
IPR017452GPCR, rhodopsin-like, 7TMDomain
IPR000826Formyl peptide receptor-relatedFamily
IPR009048Alpha-macroglobulin, receptor-bindingDomain
IPR041555Macroglobulin domain MG3Domain
IPR001599Alpha-2-macroglobulinDomain
IPR048843Complement component 5, CUB domainDomain
IPR018081Anaphylatoxin, complement systemHomologous Superfamily
IPR018933Netrin module, non-TIMP typeDomain
IPR001840Anaphylatoxin, complement system domainDomain
IPR041425Complement C3/4/5, macroglobulin domain MG1Domain
IPR011625Alpha-2-macroglobulin, bait region domainDomain
IPR001134Netrin domainDomain
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldHomologous Superfamily
IPR011626Alpha-macroglobulin-like, TED domainDomain
IPR000020Anaphylatoxin/fibulinDomain
IPR036595Alpha-macroglobulin, receptor-binding domain superfamilyHomologous Superfamily
IPR002890Macroglobulin domainDomain
IPR013783Immunoglobulin-like foldHomologous Superfamily
IPR050473Alpha-2-macroglobulin/Complement systemFamily
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidHomologous Superfamily
IPR040839Macroglobulin domain MG4Domain
IPR001019Guanine nucleotide binding protein (G-protein), alpha subunitFamily
IPR011025G protein alpha subunit, helical insertionHomologous Superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR001408G-protein alpha subunit, group IFamily
IPR019775WD40 repeat, conserved siteConserved Site
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR016346Guanine nucleotide-binding protein, beta subunitFamily
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IPR001632G-protein, beta subunitDomain
IPR001680WD40 repeatRepeat
IPR020472G-protein beta WD-40 repeatRepeat
E [auth G]IPR036284G-protein gamma-like domain superfamilyHomologous Superfamily
E [auth G]IPR015898G-protein gamma-like domainDomain
E [auth G]IPR001770G-protein, gamma subunitFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP21730
PharosP01031
PharosP63096

Membrane Protein Annotation: PDBTM PDBTM Database Homepage