7Q08

Structure of Candida albicans 80S ribosome in complex with cycloheximide


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
L [auth r]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8107680 3000884 SCOP2B (2022-06-29)
M [auth s]SCOP2 FamilyRibosomal protein L5 8107489 4001498 SCOP2 (2022-06-29)
M [auth s]SCOP2 SuperfamilyRL5-like 8107490 3001709 SCOP2 (2022-06-29)
P [auth v]SCOP2 FamilyL15e 8107671 4000945 SCOP2 (2022-06-29)
P [auth v]SCOP2 SuperfamilyRibosomal proteins S24e, L23 and L15e 8107672 3000210 SCOP2 (2022-06-29)
X [auth 6]SCOP2 FamilyRibosomal protein L14 8107509 4001826 SCOP2 (2022-06-29)
X [auth 6]SCOP2 Superfamily50S Ribosomal protein L14-like 8107510 3000433 SCOP2 (2022-06-29)
HA [auth AG]SCOP2B SuperfamilyTranslational proteins 8107488 3000811 SCOP2B (2022-06-29)
OA [auth AN]SCOP2B SuperfamilyZn-binding ribosomal proteins 8107498 3001320 SCOP2B (2022-06-29)
UA [auth B]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8107580 3001397 SCOP2B (2022-06-29)
VA [auth C]SCOP2B SuperfamilyRibosomal S3Ae-like 8107594 3002166 SCOP2B (2022-06-29)
ZA [auth G]SCOP2B SuperfamilyRibosomal protein S7 8107676 3000799 SCOP2B (2022-06-29)
EB [auth L]SCOP2B SuperfamilyWinged helix DNA-binding domain 8107492 3000034 SCOP2B (2022-06-29)
GB [auth N]SCOP2B SuperfamilyL30e-like 8107674 3001739 SCOP2B (2022-06-29)
NB [auth U]SCOP2B SuperfamilyWinged helix DNA-binding domain 8107496 3000034 SCOP2B (2022-06-29)
PB [auth W]SCOP2 FamilyRibosomal protein S21e 8107471 4006215 SCOP2 (2022-06-29)
PB [auth W]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8107472 3000068 SCOP2 (2022-06-29)
TB [auth a]SCOP2B SuperfamilyWinged helix DNA-binding domain 8107504 3000034 SCOP2B (2022-06-29)
WB [auth d]SCOP2B SuperfamilyNucleic acid-binding proteins 8107512 3000135 SCOP2B (2022-06-29)
T [auth z]SCOP2B SuperfamilyRibosomal protein L19 (L19e) 8107494 3000890 SCOP2B (2022-06-29)
W [auth 5]SCOP2 Family60S Ribosomal protein L22e 8107499 4006528 SCOP2 (2022-06-29)
W [auth 5]SCOP2 Superfamily60S Ribosomal protein L22e 8107500 3002158 SCOP2 (2022-06-29)
AA [auth 9]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8107474 3000334 SCOP2B (2022-06-29)
CA [auth AB]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8107516 3001045 SCOP2B (2022-06-29)
DA [auth AC]SCOP2B SuperfamilyRibosomal protein L29e 8107484 3002157 SCOP2B (2022-06-29)
EA [auth AD]SCOP2B SuperfamilyL30e-like 8107502 3001739 SCOP2B (2022-06-29)
GA [auth AF]SCOP2B SuperfamilyRibosomal protein L32e 8107508 3000982 SCOP2B (2022-06-29)
IA [auth AH]SCOP2B SuperfamilyRibosomal protein L34e-like 8107482 3002203 SCOP2B (2022-06-29)
MA [auth AL]SCOP2B SuperfamilyRibosomal L38e protein-like 8107486 3002206 SCOP2B (2022-06-29)
NA [auth AM]SCOP2B SuperfamilyRibosomal protein L39e 8107480 3001756 SCOP2B (2022-06-29)
RA [auth AQ]SCOP2B SuperfamilyZn-binding ribosomal proteins 8107506 3001320 SCOP2B (2022-06-29)
E [auth k]SCOP2B SuperfamilyTranslational proteins 8107668 3000811 SCOP2B (2022-06-29)
IB [auth P]SCOP2B SuperfamilyTranslational machinery components 8107478 3000571 SCOP2B (2022-06-29)
KB [auth R]SCOP2 FamilyTranslational machinery components 8107475 4000951 SCOP2 (2022-06-29)
KB [auth R]SCOP2 SuperfamilyRibosomal protein S5 domain 2-like 8107476 3000100 SCOP2 (2022-06-29)
MB [auth T]SCOP2B SuperfamilyS13-like H2TH domain 8107514 3000053 SCOP2B (2022-06-29)
OB [auth V]SCOP2B SuperfamilyRibosomal protein S10 8107670 3001336 SCOP2B (2022-06-29)
QB [auth X]SCOP2B SuperfamilyRibosomal protein S8 8107696 3000709 SCOP2B (2022-06-29)
G [auth m]SCOP2B SuperfamilyTranslational machinery components 8107678 3000571 SCOP2B (2022-06-29)
UB [auth b]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8107682 3000068 SCOP2B (2022-06-29)
XB [auth e]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8107520 3000068 SCOP2B (2022-06-29)
YB [auth f]SCOP2B SuperfamilyRibosomal protein S30e-like 8107518 3002190 SCOP2B (2022-06-29)
AC [auth h]SCOP2B SuperfamilyWD40 repeat-like 8107636 3001694 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth p]Ribosomal_L7Ae_1e7q08p1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
L [auth r]Ribosomal_L16e7q08r1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
M [auth s]Ribosomal_L5_Ce7q08s1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
N [auth t]Ribosomal_L13ee7q08t1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
O [auth u]Ribosomal_L14ee7q08u1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
P [auth v]Ribosomal_L15ee7q08v1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
X [auth 6]Ribosomal_L14e7q0861 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
HA [auth AG]Ribosomal_L35Aee7q08AG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
OA [auth AN]Ribosomal_L40ee7q08AN1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
PA [auth AO]Ribosomal_L41e7q08AO1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
UA [auth B]Ribosomal_S2_2e7q08B1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
VA [auth C]Ribosomal_S3Ae_Ne7q08C1 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
VA [auth C]Ribosomal_S3Ae_Ce7q08C2 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
YA [auth F]Ribosomal_S4ee7q08F2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
YA [auth F]40S_S4_Ce7q08F3 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
YA [auth F]RS4NTe7q08F1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
ZA [auth G]Ribosomal_S7_1e7q08G1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
EB [auth L]S10_plectine7q08L1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
GB [auth N]Ribosomal_L7Aee7q08N1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
NB [auth U]Ribosomal_S19ee7q08U1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
PB [auth W]Ribosomal_S21ee7q08W1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
TB [auth a]Ribosomal_S25e7q08a1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
WB [auth d]Ribosomal_S28ee7q08d1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
K [auth q]Ribosomal_L6_2e7q08q1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
K [auth q]Ribosomal_L6e7q08q2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
Q [auth w]Ribosomal_L13e7q08w1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
R [auth x]Ribosomal_L22e7q08x1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
S [auth y]Ribosomal_L18e7q08y1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
T [auth z]Ribosomal_L19e_Ne7q08z2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
T [auth z]Ribosomal_L19e_Ce7q08z1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
U [auth 0]Ribosomal_L18Ae7q0802 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
V [auth 2]Ribosomal_L21ee7q0821 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
W [auth 5]Ribosomal_L22ee7q0851 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
Y [auth 7]Ribosomal_L24ee7q0871 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
Z [auth 8]Ribosomal_L23_3e7q0881 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
AA [auth 9]Ribosomal_L26e7q0891 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
BA [auth AA]Ribosomal_L27ee7q08AA1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
CA [auth AB]Ribosomal_L18e7q08AB1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
DA [auth AC]Ribosomal_L29ee7q08AC1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
EA [auth AD]Ribosomal_L7Aee7q08AD1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
FA [auth AE]Ribosomal_L31ee7q08AE1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
GA [auth AF]Ribosomal_L32ee7q08AF1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
IA [auth AH]Ribosomal_L34ee7q08AH1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
JA [auth AI]Ribosomal_L29_2e7q08AI1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
KA [auth AJ]Ribosomal_L36ee7q08AJ1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
LA [auth AK]Ribosomal_L37ee7q08AK1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
MA [auth AL]Ribosomal_L38ee7q08AL1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
D [auth j]Ribosomal_L2_1e7q08j1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
D [auth j]Ribosomal_L2_C_2e7q08j2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
NA [auth AM]Ribosomal_L39e7q08AM1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
QA [auth AP]Ribosomal_L44e7q08AP1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
RA [auth AQ]Ribosomal_L37aee7q08AQ1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
SA [auth i]HABP4_PAI-RBP1_Ne7q08i1 A: extended segmentsX: Suppressor protein STM1 (From Topology)H: Suppressor protein STM1 (From Topology)T: Suppressor protein STM1F: HABP4_PAI-RBP1_NECOD (1.6)
WA [auth D]Ribosomal_S5_C_1e7q08D2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
WA [auth D]Ribosomal_S5_3e7q08D3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
WA [auth D]Ribosomal_S5_2e7q08D1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
E [auth k]Ribosomal_L3e7q08k1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
XA [auth E]Ribosomal_S3_Ce7q08E1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
XA [auth E]KH_2_3e7q08E2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
AB [auth H]Ribosomal_S6ee7q08H1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
BB [auth I]Ribosomal_S7e_Ne7q08I2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
BB [auth I]Ribosomal_S7e_C_2e7q08I1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_2ECOD (1.6)
CB [auth J]Ribosomal_S8ee7q08J1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
DB [auth K]S4e7q08K1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
FB [auth M]Ribosomal_S17_1e7q08M1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
F [auth l]Ribosomal_L4e7q08l1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
F [auth l]Ribos_L4_asso_Ce7q08l2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
HB [auth O]Ribosomal_S13_Ne7q08O2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
HB [auth O]Ribosomal_S15_2e7q08O1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
IB [auth P]Ribosomal_S11e7q08P1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
JB [auth Q]Ribosomal_S19e7q08Q1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
KB [auth R]Ribosomal_S9e7q08R1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
LB [auth S]Ribosomal_S17ee7q08S1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
MB [auth T]Ribosomal_S13e7q08T1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
OB [auth V]Ribosomal_S10_1e7q08V1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
QB [auth X]Ribosomal_S8_N_1e7q08X2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
QB [auth X]Ribosomal_S8_C_1e7q08X1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
G [auth m]Ribosomal_L5ee7q08m1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
RB [auth Y]Ribosom_S12_S23e7q08Y1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
SB [auth Z]Ribosomal_S24ee7q08Z1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
UB [auth b]Ribosomal_S26ee7q08b1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
VB [auth c]Ribosomal_S27ee7q08c1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
XB [auth e]Ribosomal_S14_2e7q08e1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
YB [auth f]Ribosomal_S30e7q08f1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
ZB [auth g]Ribosomal_S27e7q08g1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
AC [auth h]ANAPC4_WD40_2e7q08h1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: ANAPC4_WD40_2ECOD (1.6)
H [auth n]Ribosomal_L6ee7q08n1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
I [auth o]Ribosomal_L30_1e7q08o1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
X [auth 6]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
HA [auth AG]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
OA [auth AN]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
UA [auth B]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
VA [auth C]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
YA [auth F]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
YA [auth F]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
YA [auth F]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
YA [auth F]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
YA [auth F]PF00467KOW motif (KOW)KOW motif- Family
ZA [auth G]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
ZA [auth G]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
EB [auth L]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
EB [auth L]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
GB [auth N]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
GB [auth N]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
NB [auth U]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
NB [auth U]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
PB [auth W]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
PB [auth W]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
U [auth 0]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
W [auth 5]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
Y [auth 7]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
Z [auth 8]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
AA [auth 9]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
BA [auth AA]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
CA [auth AB]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
DA [auth AC]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
FA [auth AE]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
GA [auth AF]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
JA [auth AI]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
KA [auth AJ]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
LA [auth AK]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
MA [auth AL]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
NA [auth AM]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
QA [auth AP]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
RA [auth AQ]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
WA [auth D]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
WA [auth D]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
XA [auth E]PF07650KH domain (KH_2)KH domain- Domain
XA [auth E]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
XA [auth E]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
AB [auth H]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
AB [auth H]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
BB [auth I]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
CB [auth J]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
CB [auth J]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
CB [auth J]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
DB [auth K]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
DB [auth K]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
FB [auth M]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
FB [auth M]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
FB [auth M]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
HB [auth O]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
HB [auth O]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
IB [auth P]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
IB [auth P]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
JB [auth Q]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
JB [auth Q]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
KB [auth R]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
KB [auth R]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
LB [auth S]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
LB [auth S]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
MB [auth T]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
MB [auth T]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
OB [auth V]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
OB [auth V]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
QB [auth X]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
QB [auth X]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
RB [auth Y]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
RB [auth Y]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
SB [auth Z]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
SB [auth Z]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]25S ribosomal RNA---
B [auth 3]5S ribosomal RNA---
J [auth p]60S ribosomal protein L8
L [auth r]Ribosomal 60S subunit protein L10
M [auth s]Ribosomal 60S subunit protein L11B
N [auth t]60S ribosomal protein L13
O [auth u]Ribosomal 60S subunit protein L14B
P [auth v]Ribosomal protein L15
X [auth 6]Ribosomal 60S subunit protein L23B
HA [auth AG]Ribosomal 60S subunit protein L33A
OA [auth AN]Rpl40bp
PA [auth AO]60S ribosomal protein eL41---
UA [auth B]40S ribosomal protein S0
VA [auth C]40S ribosomal protein S1
YA [auth F]40S ribosomal protein S4
ZA [auth G]Ribosomal 40S subunit protein S5
EB [auth L]Ribosomal 40S subunit protein S10A -
GB [auth N]40S ribosomal protein S12
NB [auth U]Ribosomal 40S subunit protein S19A
PB [auth W]40S ribosomal protein S21
TB [auth a]40S ribosomal protein S25 -
WB [auth d]Ribosomal 40S subunit protein S28B
K [auth q]Ribosomal 60S subunit protein L9B
Q [auth w]Ribosomal 60S subunit protein L16A
R [auth x]Ribosomal 60S subunit protein L17B
S [auth y]Ribosomal 60S subunit protein L18A
T [auth z]Ribosomal protein L19
U [auth 0]60S ribosomal protein L20
V [auth 2]Ribosomal 60S subunit protein L21A
W [auth 5]Ribosomal 60S subunit protein L22B
Y [auth 7]Ribosomal 60S subunit protein L24A
Z [auth 8]Ribosomal 60S subunit protein L25
AA [auth 9]Ribosomal 60S subunit protein L26B
BA [auth AA]60S ribosomal protein L27
CA [auth AB]Ribosomal 60S subunit protein L28
C [auth 4]5.8S ribosomal RNA---
DA [auth AC]60S ribosomal protein L29
EA [auth AD]Ribosomal 60S subunit protein L30
FA [auth AE]Ribosomal 60S subunit protein L31B
GA [auth AF]Ribosomal 60S subunit protein L32
IA [auth AH]Ribosomal 60S subunit protein L34B
JA [auth AI]Ribosomal 60S subunit protein L35A
KA [auth AJ]60S ribosomal protein L36
LA [auth AK]Ribosomal protein L37
MA [auth AL]Ribosomal 60S subunit protein L38
D [auth j]Ribosomal 60S subunit protein L2A
NA [auth AM]60S ribosomal protein L39
QA [auth AP]Ribosomal 60S subunit protein L42A
RA [auth AQ]Ribosomal 60S subunit protein L43A
SA [auth i]HABP4_PAI-RBP1 domain-containing protein
TA [auth A]18S ribosomal RNA---
WA [auth D]Ribosomal 40S subunit protein S2
E [auth k]Ribosomal 60S subunit protein L3
XA [auth E]Ribosomal 40S subunit protein S3
AB [auth H]40S ribosomal protein S6
BB [auth I]40S ribosomal protein S7
CB [auth J]40S ribosomal protein S8
DB [auth K]Ribosomal 40S subunit protein S9B
FB [auth M]Ribosomal 40S subunit protein S11A
F [auth l]Ribosomal 60S subunit protein L4B
HB [auth O]Ribosomal 40S subunit protein S13
IB [auth P]Ribosomal 40S subunit protein S14B
JB [auth Q]Ribosomal 40S subunit protein S15
KB [auth R]Ribosomal 40S subunit protein S16A
LB [auth S]Ribosomal 40S subunit protein S17B
MB [auth T]Ribosomal 40S subunit protein S18B
OB [auth V]Ribosomal 40S subunit protein S20
QB [auth X]40S ribosomal protein S22-A
G [auth m]Ribosomal 60S subunit protein L5
RB [auth Y]Ribosomal 40S subunit protein S23B
SB [auth Z]40S ribosomal protein S24
UB [auth b]40S ribosomal protein S26
VB [auth c]40S ribosomal protein S27
XB [auth e]Ribosomal 40S subunit protein S29A
YB [auth f]40S ribosomal protein S30
ZB [auth g]Ubiquitin-ribosomal 40S subunit protein S31 fusion protein
AC [auth h]Guanine nucleotide-binding protein subunit beta-like protein
H [auth n]60S ribosomal protein L6
I [auth o]Ribosomal 60S subunit protein L7A

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth p]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
J [auth p]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth p]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
J [auth p]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth p]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
J [auth p]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
L [auth r]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth r]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
L [auth r]IPR016180Large ribosomal subunit protein uL16 domainDomain
L [auth r]IPR047873Large ribosomal subunit protein uL16Family
L [auth r]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
M [auth s]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
M [auth s]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
M [auth s]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
M [auth s]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
M [auth s]IPR002132Large ribosomal subunit protein uL5Family
N [auth t]IPR001380Large ribosomal subunit protein eL13Family
N [auth t]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
O [auth u]IPR039660Large ribosomal subunit protein eL14Family
O [auth u]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
O [auth u]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
O [auth u]IPR002784Large ribosomal subunit protein eL14 domainDomain
O [auth u]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth v]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
P [auth v]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
P [auth v]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
P [auth v]IPR000439Large ribosomal subunit protein eL15Family
X [auth 6]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
X [auth 6]IPR000218Large ribosomal subunit protein uL14Family
X [auth 6]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
HA [auth AG]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
HA [auth AG]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
HA [auth AG]IPR001780Large ribosomal subunit protein eL33Family
HA [auth AG]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
OA [auth AN]IPR001975Large ribosomal subunit protein eL40 domainDomain
OA [auth AN]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
OA [auth AN]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
UA [auth B]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
UA [auth B]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
UA [auth B]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
UA [auth B]IPR001865Small ribosomal subunit protein uS2Family
UA [auth B]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
VA [auth C]IPR001593Small ribosomal subunit protein eS1Family
VA [auth C]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
VA [auth C]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
YA [auth F]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
YA [auth F]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
YA [auth F]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
YA [auth F]IPR002942RNA-binding S4 domainDomain
YA [auth F]IPR013845Small ribosomal subunit protein eS4, central regionDomain
YA [auth F]IPR000876Small ribosomal subunit protein eS4Family
YA [auth F]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
YA [auth F]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
YA [auth F]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
YA [auth F]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
YA [auth F]IPR005824KOWDomain
ZA [auth G]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
ZA [auth G]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
ZA [auth G]IPR000235Small ribosomal subunit protein uS7Family
ZA [auth G]IPR023798Small ribosomal subunit protein uS7 domainDomain
ZA [auth G]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
EB [auth L]IPR037447Small ribosomal subunit protein eS10Family
EB [auth L]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
EB [auth L]IPR005326Plectin/eS10, N-terminalDomain
GB [auth N]IPR000530Small ribosomal subunit protein eS12Family
GB [auth N]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
GB [auth N]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
GB [auth N]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
NB [auth U]IPR001266Small ribosomal subunit protein eS19Family
NB [auth U]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
NB [auth U]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
PB [auth W]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
PB [auth W]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
PB [auth W]IPR001931Small ribosomal subunit protein eS21Family
TB [auth a]IPR004977Small ribosomal subunit protein eS25Family
TB [auth a]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
WB [auth d]IPR028626Ribosomal protein eS28 conserved siteConserved Site
WB [auth d]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
WB [auth d]IPR000289Small ribosomal subunit protein eS28Family
K [auth q]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
K [auth q]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
K [auth q]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
K [auth q]IPR000702Large ribosomal subunit protein uL6-likeFamily
Q [auth w]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
Q [auth w]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
Q [auth w]IPR005822Large ribosomal subunit protein uL13Family
Q [auth w]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
R [auth x]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth x]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth x]IPR001063Large ribosomal subunit protein uL22Family
R [auth x]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
S [auth y]IPR021131Large ribosomal subunit protein uL15/eL18Domain
S [auth y]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
S [auth y]IPR000039Large ribosomal subunit protein eL18Family
S [auth y]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
T [auth z]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
T [auth z]IPR039547Large ribosomal subunit protein eL19Family
T [auth z]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
T [auth z]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
T [auth z]IPR000196Large ribosomal subunit protein eL19 domainDomain
T [auth z]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
U [auth 0]IPR028877Large ribosomal subunit protein eL20Family
U [auth 0]IPR023573Large ribosomal subunit protein eL20 domainDomain
U [auth 0]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
V [auth 2]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
V [auth 2]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
V [auth 2]IPR001147Large ribosomal subunit protein eL21Family
V [auth 2]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth 5]IPR002671Large ribosomal subunit protein eL22Family
W [auth 5]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
Y [auth 7]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
Y [auth 7]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Y [auth 7]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
Z [auth 8]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Z [auth 8]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
Z [auth 8]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
Z [auth 8]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
Z [auth 8]IPR013025Large ribosomal subunit protein uL23-likeFamily
AA [auth 9]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
AA [auth 9]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth 9]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth 9]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
AA [auth 9]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
BA [auth AA]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
BA [auth AA]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
BA [auth AA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth AA]IPR001141Large ribosomal subunit protein eL27Family
BA [auth AA]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
CA [auth AB]IPR021131Large ribosomal subunit protein uL15/eL18Domain
CA [auth AB]IPR030878Large ribosomal subunit protein uL15Family
CA [auth AB]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
CA [auth AB]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
DA [auth AC]IPR002673Large ribosomal subunit protein eL29Family
EA [auth AD]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
EA [auth AD]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
EA [auth AD]IPR039109Large ribosomal subunit protein eL30-likeFamily
EA [auth AD]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
FA [auth AE]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
FA [auth AE]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
FA [auth AE]IPR000054Large ribosomal subunit protein eL31Family
GA [auth AF]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
GA [auth AF]IPR001515Large ribosomal subunit protein eL32Family
GA [auth AF]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
IA [auth AH]IPR008195Large ribosomal subunit protein eL34Family
IA [auth AH]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
JA [auth AI]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
JA [auth AI]IPR001854Large ribosomal subunit protein uL29Family
JA [auth AI]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
KA [auth AJ]IPR000509Large ribosomal subunit protein eL36Family
KA [auth AJ]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
LA [auth AK]IPR001569Large ribosomal subunit protein eL37Family
LA [auth AK]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
LA [auth AK]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LA [auth AK]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
MA [auth AL]IPR002675Large ribosomal subunit protein eL38Family
MA [auth AL]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
D [auth j]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
D [auth j]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
D [auth j]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth j]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth j]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
D [auth j]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth j]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
D [auth j]IPR002171Large ribosomal subunit protein uL2Family
NA [auth AM]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
NA [auth AM]IPR000077Large ribosomal subunit protein eL39Family
NA [auth AM]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
QA [auth AP]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
QA [auth AP]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
QA [auth AP]IPR000552Large ribosomal subunit protein eL42Family
RA [auth AQ]IPR002674Large ribosomal subunit protein eL43Family
RA [auth AQ]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth AQ]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
RA [auth AQ]IPR050522Eukaryotic ribosomal protein eL43Family
SA [auth i]IPR019084STM1-like, N-terminalDomain
SA [auth i]IPR039764RNA binding protein HABP4/SERBP1-likeFamily
SA [auth i]IPR006861Hyaluronan/mRNA-binding proteinDomain
WA [auth D]IPR000851Small ribosomal subunit protein uS5Family
WA [auth D]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
WA [auth D]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
WA [auth D]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
WA [auth D]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
WA [auth D]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
WA [auth D]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
E [auth k]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth k]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
E [auth k]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
E [auth k]IPR000597Large ribosomal subunit protein uL3Family
E [auth k]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
XA [auth E]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
XA [auth E]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
XA [auth E]IPR004044K Homology domain, type 2Domain
XA [auth E]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
XA [auth E]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
XA [auth E]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
AB [auth H]IPR014401Small ribosomal subunit protein eS6-likeFamily
AB [auth H]IPR001377Small ribosomal subunit protein eS6Family
AB [auth H]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
BB [auth I]IPR000554Small ribosomal subunit protein eS7Family
BB [auth I]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
CB [auth J]IPR001047Small ribosomal subunit protein eS8Family
CB [auth J]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
CB [auth J]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
CB [auth J]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
DB [auth K]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
DB [auth K]IPR002942RNA-binding S4 domainDomain
DB [auth K]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
DB [auth K]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
DB [auth K]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
DB [auth K]IPR022801Small ribosomal subunit protein uS4Family
FB [auth M]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
FB [auth M]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
FB [auth M]IPR000266Small ribosomal subunit protein uS17Family
FB [auth M]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
FB [auth M]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
F [auth l]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
F [auth l]IPR002136Large ribosomal subunit protein uL4Family
F [auth l]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
F [auth l]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
F [auth l]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
HB [auth O]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
HB [auth O]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
HB [auth O]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
HB [auth O]IPR000589Small ribosomal subunit protein uS15Family
IB [auth P]IPR001971Small ribosomal subunit protein uS11Family
IB [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
IB [auth P]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
JB [auth Q]IPR002222Small ribosomal subunit protein uS19Family
JB [auth Q]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
JB [auth Q]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
JB [auth Q]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
KB [auth R]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
KB [auth R]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
KB [auth R]IPR000754Small ribosomal subunit protein uS9Family
KB [auth R]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
LB [auth S]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
LB [auth S]IPR001210Small ribosomal subunit protein eS17Family
LB [auth S]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
MB [auth T]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
MB [auth T]IPR001892Small ribosomal subunit protein uS13Family
MB [auth T]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
MB [auth T]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
OB [auth V]IPR001848Small ribosomal subunit protein uS10Family
OB [auth V]IPR027486Small ribosomal subunit protein uS10 domainDomain
OB [auth V]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
OB [auth V]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
OB [auth V]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
QB [auth X]IPR000630Small ribosomal subunit protein uS8Family
QB [auth X]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
QB [auth X]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
G [auth m]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
G [auth m]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
RB [auth Y]IPR006032Small ribosomal subunit protein uS12Family
RB [auth Y]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
RB [auth Y]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
SB [auth Z]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
SB [auth Z]IPR001976Small ribosomal subunit protein eS24Family
SB [auth Z]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
SB [auth Z]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
UB [auth b]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
UB [auth b]IPR000892Small ribosomal subunit protein eS26Family
UB [auth b]IPR047864Ribosomal protein eS26, conserved siteConserved Site
VB [auth c]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
VB [auth c]IPR000592Small ribosomal subunit protein eS27Family
VB [auth c]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XB [auth e]IPR001209Small ribosomal subunit protein uS14Family
XB [auth e]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
XB [auth e]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
XB [auth e]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
YB [auth f]IPR006846Small ribosomal subunit protein eS30Family
ZB [auth g]IPR019954Ubiquitin conserved siteConserved Site
ZB [auth g]IPR000626Ubiquitin-like domainDomain
ZB [auth g]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
ZB [auth g]IPR002906Small ribosomal subunit protein eS31Domain
ZB [auth g]IPR019956Ubiquitin domainDomain
ZB [auth g]IPR050158Ubiquitin and ubiquitin-likeFamily
ZB [auth g]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
ZB [auth g]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AC [auth h]IPR019775WD40 repeat, conserved siteConserved Site
AC [auth h]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
AC [auth h]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
AC [auth h]IPR045223Small ribosomal subunit protein RACK1-likeFamily
AC [auth h]IPR001680WD40 repeatRepeat
AC [auth h]IPR020472G-protein beta WD-40 repeatRepeat
H [auth n]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
H [auth n]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth n]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
H [auth n]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
H [auth n]IPR000915Large ribosomal subunit protein eL6Family
I [auth o]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
I [auth o]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
I [auth o]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
I [auth o]IPR039699Large ribosomal subunit protein uL30Family
I [auth o]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
I [auth o]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A [auth 1]OMC Parent Component: C

A [auth 1]OMG Parent Component: G

X [auth 6]MLZ Parent Component: LYS

RESIDAA0076

PSI-MOD :  N6-methyl-L-lysine MOD:00085
QA [auth AP]MLZ Parent Component: LYS

RESIDAA0076 , AA0076

PSI-MOD :  N6-methyl-L-lysine MOD:00085 , N6-methyl-L-lysine MOD:00085
IB [auth P]IAS RESIDAA0076 , AA0076