7PL5

Crystal structure of choline-binding module (R1-R9) of LytB from Streptococcus pneumoniae

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth AAA]CW_binding_1e7pl5AAA1 A: beta duplicates or obligate multimersX: beta-hairpin stack (From Topology)H: beta-hairpin stack (From Topology)T: beta-hairpin stackF: CW_binding_1ECOD (1.6)
B [auth BBB]CW_binding_1e7pl5BBB1 A: beta duplicates or obligate multimersX: beta-hairpin stack (From Topology)H: beta-hairpin stack (From Topology)T: beta-hairpin stackF: CW_binding_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth AAA],
B [auth BBB]		PF01473Putative cell wall binding repeat (Choline_bind_1)Putative cell wall binding repeat- Repeat
A [auth AAA],
B [auth BBB]		PF19085Choline-binding repeat (Choline_bind_2)Choline-binding repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AAA],
B [auth BBB]		Putative endo-beta-N-acetylglucosaminidase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth AAA],
B [auth BBB]		IPR041074Endo-beta-N-acetylglucosaminidase LytB, LytB SH3 domainDomain
A [auth AAA],
B [auth BBB]		IPR051056Glycosyl Hydrolase Family 73Family
A [auth AAA],
B [auth BBB]		IPR002901Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domainDomain
A [auth AAA],
B [auth BBB]		IPR018337Cell wall/choline-binding repeatRepeat
A [auth AAA],
B [auth BBB]		IPR040742Peptidoglycan hydrolase LytB, WW-like domainDomain