6SCF | pdb_00006scf

A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	STIV B116-like	8086535	3001712	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	STIV B116-like	8086535	3001712	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	STIV B116-like	8086535	3001712	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	STIV B116-like	8086535	3001712	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	STIV B116-like	8086535	3001712	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	STIV B116-like	8086535	3001712	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	STIV B116-like	8086535	3001712	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	STIV B116-like	8086535	3001712	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF1874	e6scfA1	A: a+b complex topology	X: STIV B116-like (From Topology)	H: STIV B116-like (From Topology)	T: STIV B116-like	F: DUF1874	ECOD (1.6)
B	DUF1874	e6scfB1	A: a+b complex topology	X: STIV B116-like (From Topology)	H: STIV B116-like (From Topology)	T: STIV B116-like	F: DUF1874	ECOD (1.6)
C	DUF1874	e6scfC1	A: a+b complex topology	X: STIV B116-like (From Topology)	H: STIV B116-like (From Topology)	T: STIV B116-like	F: DUF1874	ECOD (1.6)
D	DUF1874	e6scfD1	A: a+b complex topology	X: STIV B116-like (From Topology)	H: STIV B116-like (From Topology)	T: STIV B116-like	F: DUF1874	ECOD (1.6)
E	DUF1874	e6scfE1	A: a+b complex topology	X: STIV B116-like (From Topology)	H: STIV B116-like (From Topology)	T: STIV B116-like	F: DUF1874	ECOD (1.6)
F	DUF1874	e6scfF1	A: a+b complex topology	X: STIV B116-like (From Topology)	H: STIV B116-like (From Topology)	T: STIV B116-like	F: DUF1874	ECOD (1.6)
G	DUF1874	e6scfG1	A: a+b complex topology	X: STIV B116-like (From Topology)	H: STIV B116-like (From Topology)	T: STIV B116-like	F: DUF1874	ECOD (1.6)
H	DUF1874	e6scfH1	A: a+b complex topology	X: STIV B116-like (From Topology)	H: STIV B116-like (From Topology)	T: STIV B116-like	F: DUF1874	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.11170	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Uncharacterised protein PF08960, DUF1874	CATH (utative)
B	3.40.50.11170	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Uncharacterised protein PF08960, DUF1874	CATH (utative)
C	3.40.50.11170	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Uncharacterised protein PF08960, DUF1874	CATH (utative)
D	3.40.50.11170	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Uncharacterised protein PF08960, DUF1874	CATH (utative)
E	3.40.50.11170	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Uncharacterised protein PF08960, DUF1874	CATH (utative)
F	3.40.50.11170	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Uncharacterised protein PF08960, DUF1874	CATH (utative)
G	3.40.50.11170	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Uncharacterised protein PF08960, DUF1874	CATH (utative)
H	3.40.50.11170	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Uncharacterised protein PF08960, DUF1874	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF08960	STIV B116-like (STIV_B116-like)	STIV B116-like	The sulfolobus turreted icosahedral virus (STIV) infects Sulfolobus species found in the hot springs of Yellowstone National Park. It has 37 ORFs including B116, whose function is unknown. The structure of B116 reveals a fold consisting of a five-str ...	The sulfolobus turreted icosahedral virus (STIV) infects Sulfolobus species found in the hot springs of Yellowstone National Park. It has 37 ORFs including B116, whose function is unknown. The structure of B116 reveals a fold consisting of a five-stranded beta-sheet flanked on one side by three alpha helices. Two subunits come together to form a homodimer with a 10-stranded mixed beta-sheet, where the topology of the central strands resembles an unclosed beta-barrel [1].	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR015055	STIV B116-like	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR037236	STIV B116-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.