4V9Q

Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth AE]SCOP2B SuperfamilyTranslational proteins 8089140 3000811 SCOP2B (2022-06-29)
FB [auth CE]SCOP2B SuperfamilyTranslational proteins 8089140 3000811 SCOP2B (2022-06-29)
I [auth AJ]SCOP2B SuperfamilyRibosomal protein L13 8099906 3001134 SCOP2B (2022-06-29)
KB [auth CJ]SCOP2B SuperfamilyRibosomal protein L13 8099906 3001134 SCOP2B (2022-06-29)
J [auth AK]SCOP2B Superfamily50S Ribosomal protein L14-like 8093738 3000433 SCOP2B (2022-06-29)
LB [auth CK]SCOP2B Superfamily50S Ribosomal protein L14-like 8093738 3000433 SCOP2B (2022-06-29)
N [auth AO]SCOP2B SuperfamilyTranslational machinery components 8074014 3000571 SCOP2B (2022-06-29)
PB [auth CO]SCOP2B SuperfamilyTranslational machinery components 8074014 3000571 SCOP2B (2022-06-29)
P [auth AQ]SCOP2B SuperfamilyRibosomal protein L20 8093660 3000563 SCOP2B (2022-06-29)
RB [auth CQ]SCOP2B SuperfamilyRibosomal protein L20 8093660 3000563 SCOP2B (2022-06-29)
Q [auth AR]SCOP2B Superfamilyl21p-like 8093656 3002005 SCOP2B (2022-06-29)
SB [auth CR]SCOP2B Superfamilyl21p-like 8093656 3002005 SCOP2B (2022-06-29)
R [auth AS]SCOP2B SuperfamilyRibosomal protein L22 8099898 3001078 SCOP2B (2022-06-29)
TB [auth CS]SCOP2B SuperfamilyRibosomal protein L22 8099898 3001078 SCOP2B (2022-06-29)
S [auth AT]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8099896 3000210 SCOP2B (2022-06-29)
UB [auth CT]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8099896 3000210 SCOP2B (2022-06-29)
X [auth AY]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8076744 3000713 SCOP2B (2022-06-29)
ZB [auth CY]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8076744 3000713 SCOP2B (2022-06-29)
AC [auth CZ]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8099900 3001378 SCOP2B (2022-06-29)
Y [auth AZ]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8099900 3001378 SCOP2B (2022-06-29)
AA [auth A2]SCOP2B SuperfamilyZn-binding ribosomal proteins 8081579 3001320 SCOP2B (2022-06-29)
CC [auth C2]SCOP2B SuperfamilyZn-binding ribosomal proteins 8081579 3001320 SCOP2B (2022-06-29)
DC [auth C3]SCOP2B SuperfamilyZn-binding ribosomal proteins 8099892 3001320 SCOP2B (2022-06-29)
BA [auth A3]SCOP2B SuperfamilyZn-binding ribosomal proteins 8099892 3001320 SCOP2B (2022-06-29)
DA [auth A5]SCOP2B SuperfamilyL35p-like 8099912 3000790 SCOP2B (2022-06-29)
FC [auth C5]SCOP2B SuperfamilyL35p-like 8099912 3000790 SCOP2B (2022-06-29)
FA [auth BB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063836 3001397 SCOP2B (2022-06-29)
HC [auth DB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063836 3001397 SCOP2B (2022-06-29)
JC [auth DD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8093624 3001473 SCOP2B (2022-06-29)
HA [auth BD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8093624 3001473 SCOP2B (2022-06-29)
JA [auth BF]SCOP2B SuperfamilyRibosomal protein S6 8098858 3001323 SCOP2B (2022-06-29)
LC [auth DF]SCOP2B SuperfamilyRibosomal protein S6 8098858 3001323 SCOP2B (2022-06-29)
KA [auth BG]SCOP2B SuperfamilyRibosomal protein S7 8093626 3000799 SCOP2B (2022-06-29)
MC [auth DG]SCOP2B SuperfamilyRibosomal protein S7 8093626 3000799 SCOP2B (2022-06-29)
LA [auth BH]SCOP2B SuperfamilyRibosomal protein S8 8098860 3000709 SCOP2B (2022-06-29)
NC [auth DH]SCOP2B SuperfamilyRibosomal protein S8 8098860 3000709 SCOP2B (2022-06-29)
MA [auth BI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8093728 3000100 SCOP2B (2022-06-29)
OC [auth DI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8093728 3000100 SCOP2B (2022-06-29)
NA [auth BJ]SCOP2B SuperfamilyRibosomal protein S10 8098850 3001336 SCOP2B (2022-06-29)
PC [auth DJ]SCOP2B SuperfamilyRibosomal protein S10 8098850 3001336 SCOP2B (2022-06-29)
QC [auth DK]SCOP2B SuperfamilyTranslational machinery components 8098852 3000571 SCOP2B (2022-06-29)
OA [auth BK]SCOP2B SuperfamilyTranslational machinery components 8098852 3000571 SCOP2B (2022-06-29)
PA [auth BL]SCOP2B SuperfamilyNucleic acid-binding proteins 8098824 3000135 SCOP2B (2022-06-29)
RC [auth DL]SCOP2B SuperfamilyNucleic acid-binding proteins 8098824 3000135 SCOP2B (2022-06-29)
QA [auth BM]SCOP2B SuperfamilyS13-like H2TH domain 8098854 3000053 SCOP2B (2022-06-29)
SC [auth DM]SCOP2B SuperfamilyS13-like H2TH domain 8098854 3000053 SCOP2B (2022-06-29)
XA [auth BT]SCOP2B SuperfamilyRibosomal protein S20 8101559 3001362 SCOP2B (2022-06-29)
ZC [auth DT]SCOP2B SuperfamilyRibosomal protein S20 8101559 3001362 SCOP2B (2022-06-29)
K [auth AL]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8099902 3001045 SCOP2B (2022-06-29)
MB [auth CL]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8099902 3001045 SCOP2B (2022-06-29)
RA [auth BN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052583 3000068 SCOP2B (2022-06-29)
TC [auth DN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052583 3000068 SCOP2B (2022-06-29)
WA [auth BS]SCOP2B SuperfamilyRibosomal protein S19 8098856 3000686 SCOP2B (2022-06-29)
YC [auth DS]SCOP2B SuperfamilyRibosomal protein S19 8098856 3000686 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth AD]Ribosomal_L2_1e4v9qAD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
C [auth AD]Ribosomal_L2_Ce4v9qAD1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
EB [auth CD]Ribosomal_L2_1e4v9qCD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
EB [auth CD]Ribosomal_L2_Ce4v9qCD1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
D [auth AE]Ribosomal_L3e4v9qAE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
FB [auth CE]Ribosomal_L3e4v9qCE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
E [auth AF]Ribosomal_L4e4v9qAF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
GB [auth CF]Ribosomal_L4e4v9qCF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
F [auth AG]Ribosomal_L5_Ce4v9qAG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
HB [auth CG]Ribosomal_L5_Ce4v9qCG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
G [auth AH]Ribosomal_L6e4v9qAH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
G [auth AH]Ribosomal_L6_1e4v9qAH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
IB [auth CH]Ribosomal_L6e4v9qCH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
IB [auth CH]Ribosomal_L6_1e4v9qCH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
H [auth AI]Ribosomal_L9_Ne4v9qAI2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
H [auth AI]Ribosomal_L9_Ce4v9qAI1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
JB [auth CI]Ribosomal_L9_Ne4v9qCI2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
JB [auth CI]Ribosomal_L9_Ce4v9qCI1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
I [auth AJ]Ribosomal_L13e4v9qAJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
KB [auth CJ]Ribosomal_L13e4v9qCJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
J [auth AK]Ribosomal_L14e4v9qAK1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
LB [auth CK]Ribosomal_L14e4v9qCK1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
L [auth AM]Ribosomal_L16e4v9qAM1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
NB [auth CM]Ribosomal_L16e4v9qCM1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
M [auth AN]Ribosomal_L17_1e4v9qAN1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
OB [auth CN]Ribosomal_L17_1e4v9qCN1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
N [auth AO]Ribosomal_L18pe4v9qAO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
PB [auth CO]Ribosomal_L18pe4v9qCO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
O [auth AP]Ribosomal_L19e4v9qAP1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
QB [auth CP]Ribosomal_L19e4v9qCP1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
P [auth AQ]Ribosomal_L20e4v9qAQ1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
RB [auth CQ]Ribosomal_L20e4v9qCQ1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
Q [auth AR]Ribosomal_L21pe4v9qAR1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
SB [auth CR]Ribosomal_L21pe4v9qCR1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
R [auth AS]Ribosomal_L22e4v9qAS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
TB [auth CS]Ribosomal_L22e4v9qCS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
S [auth AT]Ribosomal_L23_2e4v9qAT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
UB [auth CT]Ribosomal_L23_2e4v9qCT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
T [auth AU]ribosomal_L24e4v9qAU1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
VB [auth CU]ribosomal_L24e4v9qCU1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
WB [auth CV]Ribosomal_L25pe4v9qCV2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
WB [auth CV]Ribosomal_TL5_Ce4v9qCV1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
U [auth AV]Ribosomal_L25pe4v9qAV2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
U [auth AV]Ribosomal_TL5_Ce4v9qAV1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
V [auth AW]Ribosomal_L27e4v9qAW1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
XB [auth CW]Ribosomal_L27e4v9qCW1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
X [auth AY]Ribosomal_L29e4v9qAY1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
ZB [auth CY]Ribosomal_L29e4v9qCY1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
AC [auth CZ]Ribosomal_L30e4v9qCZ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
Y [auth AZ]Ribosomal_L30e4v9qAZ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
BC [auth C1]Ribosomal_L31e4v9qC11 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
Z [auth A1]Ribosomal_L31e4v9qA11 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
AA [auth A2]Ribosomal_L32pe4v9qA21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
CC [auth C2]Ribosomal_L32pe4v9qC21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
DC [auth C3]Ribosomal_L33e4v9qC31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
BA [auth A3]Ribosomal_L33e4v9qA31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
DA [auth A5]Ribosomal_L35pe4v9qA51 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
FC [auth C5]Ribosomal_L35pe4v9qC51 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
FA [auth BB]Ribosomal_S2e4v9qBB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
HC [auth DB]Ribosomal_S2e4v9qDB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
GA [auth BC]Ribosomal_S3_Ce4v9qBC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
GA [auth BC]KH_2_1e4v9qBC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
IC [auth DC]Ribosomal_S3_Ce4v9qDC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
IC [auth DC]KH_2_1e4v9qDC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
JC [auth DD]S4e4v9qDD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
HA [auth BD]S4e4v9qBD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
KC [auth DE]Ribosomal_S5_Ce4v9qDE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
KC [auth DE]Ribosomal_S5e4v9qDE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
IA [auth BE]Ribosomal_S5_Ce4v9qBE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
IA [auth BE]Ribosomal_S5e4v9qBE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
JA [auth BF]Ribosomal_S6e4v9qBF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
LC [auth DF]Ribosomal_S6e4v9qDF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
KA [auth BG]Ribosomal_S7_1e4v9qBG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
MC [auth DG]Ribosomal_S7_1e4v9qDG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
LA [auth BH]Ribosomal_S8_Ne4v9qBH1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
LA [auth BH]Ribosomal_S8_Ce4v9qBH2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
NC [auth DH]Ribosomal_S8_Ne4v9qDH1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
NC [auth DH]Ribosomal_S8_Ce4v9qDH2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
MA [auth BI]Ribosomal_S9e4v9qBI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
OC [auth DI]Ribosomal_S9e4v9qDI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
NA [auth BJ]Ribosomal_S10e4v9qBJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
PC [auth DJ]Ribosomal_S10e4v9qDJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
QC [auth DK]Ribosomal_S11e4v9qDK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
OA [auth BK]Ribosomal_S11e4v9qBK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
PA [auth BL]Ribosom_S12_S23e4v9qBL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
RC [auth DL]Ribosom_S12_S23e4v9qDL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
QA [auth BM]Ribosomal_S13_1e4v9qBM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
SC [auth DM]Ribosomal_S13_1e4v9qDM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
SA [auth BO]Ribosomal_S15_1e4v9qBO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
UC [auth DO]Ribosomal_S15_1e4v9qDO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
TA [auth BP]Ribosomal_S16_1e4v9qBP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
VC [auth DP]Ribosomal_S16_1e4v9qDP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
UA [auth BQ]Ribosomal_S17_1e4v9qBQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
WC [auth DQ]Ribosomal_S17_1e4v9qDQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
XC [auth DR]Ribosomal_S18e4v9qDR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
VA [auth BR]Ribosomal_S18e4v9qBR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
XA [auth BT]Ribosomal_S20pe4v9qBT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
ZC [auth DT]Ribosomal_S20pe4v9qDT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
K [auth AL]Ribosomal_L27Ae4v9qAL1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
MB [auth CL]Ribosomal_L27Ae4v9qCL1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
W [auth AX]Ribosomal_L28e4v9qAX1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
YB [auth CX]Ribosomal_L28e4v9qCX1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
CA [auth A4]Ribosomal_L34e4v9qA41 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
EC [auth C4]Ribosomal_L34e4v9qC41 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
RA [auth BN]Ribosomal_S14e4v9qBN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
TC [auth DN]Ribosomal_S14e4v9qDN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
WA [auth BS]Ribosomal_S19e4v9qBS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
YC [auth DS]Ribosomal_S19e4v9qDS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth AD],
EB [auth CD]
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
C [auth AD],
EB [auth CD]
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
D [auth AE],
FB [auth CE]
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
E [auth AF],
GB [auth CF]
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
F [auth AG],
HB [auth CG]
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
F [auth AG],
HB [auth CG]
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
G [auth AH],
IB [auth CH]
PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
H [auth AI],
JB [auth CI]
PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
H [auth AI],
JB [auth CI]
PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
I [auth AJ],
KB [auth CJ]
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
J [auth AK],
LB [auth CK]
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
L [auth AM],
NB [auth CM]
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
M [auth AN],
OB [auth CN]
PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
N [auth AO],
PB [auth CO]
PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
O [auth AP],
QB [auth CP]
PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
P [auth AQ],
RB [auth CQ]
PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
Q [auth AR],
SB [auth CR]
PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
R [auth AS],
TB [auth CS]
PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
S [auth AT],
UB [auth CT]
PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
T [auth AU],
VB [auth CU]
PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
T [auth AU],
VB [auth CU]
PF00467KOW motif (KOW)KOW motif- Family
U [auth AV],
WB [auth CV]
PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
U [auth AV],
WB [auth CV]
PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
V [auth AW],
XB [auth CW]
PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
X [auth AY],
ZB [auth CY]
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
AC [auth CZ],
Y [auth AZ]
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
BC [auth C1],
Z [auth A1]
PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
AA [auth A2],
CC [auth C2]
PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
BA [auth A3],
DC [auth C3]
PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
DA [auth A5],
FC [auth C5]
PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
FA [auth BB],
HC [auth DB]
PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
GA [auth BC],
IC [auth DC]
PF07650KH domain (KH_2)KH domain- Domain
GA [auth BC],
IC [auth DC]
PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
HA [auth BD],
JC [auth DD]
PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
HA [auth BD],
JC [auth DD]
PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
IA [auth BE],
KC [auth DE]
PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
IA [auth BE],
KC [auth DE]
PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
JA [auth BF],
LC [auth DF]
PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
KA [auth BG],
MC [auth DG]
PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
LA [auth BH],
NC [auth DH]
PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
MA [auth BI],
OC [auth DI]
PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
NA [auth BJ],
PC [auth DJ]
PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
OA [auth BK],
QC [auth DK]
PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
PA [auth BL],
RC [auth DL]
PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
QA [auth BM],
SC [auth DM]
PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
SA [auth BO],
UC [auth DO]
PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
TA [auth BP],
VC [auth DP]
PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
UA [auth BQ],
WC [auth DQ]
PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
VA [auth BR],
XC [auth DR]
PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
XA [auth BT],
ZC [auth DT]
PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
AD [auth DU],
YA [auth BU]
PF1707030S ribosomal protein Thx (Thx)30S ribosomal protein Thx- Family
K [auth AL],
MB [auth CL]
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
W [auth AX],
YB [auth CX]
PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
CA [auth A4],
EC [auth C4]
PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
RA [auth BN],
TC [auth DN]
PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
WA [auth BS],
YC [auth DS]
PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth AB],
DB [auth CB]
5S ribosomal RNA---
C [auth AD],
EB [auth CD]
50S ribosomal protein L2
D [auth AE],
FB [auth CE]
50S ribosomal protein L3
E [auth AF],
GB [auth CF]
50S ribosomal protein L4
F [auth AG],
HB [auth CG]
50S ribosomal protein L5
G [auth AH],
IB [auth CH]
50S ribosomal protein L6
H [auth AI],
JB [auth CI]
50S ribosomal protein L9
I [auth AJ],
KB [auth CJ]
50S ribosomal protein L13
J [auth AK],
LB [auth CK]
50S ribosomal protein L14
L [auth AM],
NB [auth CM]
50S ribosomal protein L16
M [auth AN],
OB [auth CN]
50S ribosomal protein L17
N [auth AO],
PB [auth CO]
50S ribosomal protein L18
O [auth AP],
QB [auth CP]
50S ribosomal protein L19
P [auth AQ],
RB [auth CQ]
50S ribosomal protein L20
Q [auth AR],
SB [auth CR]
50S ribosomal protein L21
R [auth AS],
TB [auth CS]
50S ribosomal protein L22
S [auth AT],
UB [auth CT]
50S ribosomal protein L23
T [auth AU],
VB [auth CU]
50S ribosomal protein L24
U [auth AV],
WB [auth CV]
50S ribosomal protein L25
V [auth AW],
XB [auth CW]
50S ribosomal protein L27
X [auth AY],
ZB [auth CY]
50S ribosomal protein L29
AC [auth CZ],
Y [auth AZ]
50S ribosomal protein L30
BC [auth C1],
Z [auth A1]
50S ribosomal protein L31
AA [auth A2],
CC [auth C2]
50S ribosomal protein L32
BA [auth A3],
DC [auth C3]
50S ribosomal protein L33
DA [auth A5],
FC [auth C5]
50S ribosomal protein L35
FA [auth BB],
HC [auth DB]
30S ribosomal protein S2
GA [auth BC],
IC [auth DC]
30S ribosomal protein S3
HA [auth BD],
JC [auth DD]
30S ribosomal protein S4
IA [auth BE],
KC [auth DE]
30S ribosomal protein S5
JA [auth BF],
LC [auth DF]
30S ribosomal protein S6
KA [auth BG],
MC [auth DG]
30S ribosomal protein S7
LA [auth BH],
NC [auth DH]
30S ribosomal protein S8
MA [auth BI],
OC [auth DI]
30S ribosomal protein S9
NA [auth BJ],
PC [auth DJ]
30S ribosomal protein S10
OA [auth BK],
QC [auth DK]
30S ribosomal protein S11
PA [auth BL],
RC [auth DL]
30S ribosomal protein S12
QA [auth BM],
SC [auth DM]
30S ribosomal protein S13
SA [auth BO],
UC [auth DO]
30S ribosomal protein S15
TA [auth BP],
VC [auth DP]
30S ribosomal protein S16
UA [auth BQ],
WC [auth DQ]
30S ribosomal protein S17
VA [auth BR],
XC [auth DR]
30S ribosomal protein S18
XA [auth BT],
ZC [auth DT]
30S ribosomal protein S20
AD [auth DU],
YA [auth BU]
30S ribosomal protein Thx -
AB [auth BW],
BD [auth DV],
CD [auth DW],
ZA [auth BV]
tRNA---
BB [auth BX],
DD [auth DX]
mRNA---
A [auth AA],
CB [auth CA]
23S ribosomal RNA---
K [auth AL],
MB [auth CL]
50S ribosomal protein L15
W [auth AX],
YB [auth CX]
50S ribosomal protein L28
CA [auth A4],
EC [auth C4]
50S ribosomal protein L34
EA [auth BA],
GC [auth DA]
16S ribosomal RNA---
RA [auth BN],
TC [auth DN]
30S ribosomal protein S14
WA [auth BS],
YC [auth DS]
30S ribosomal protein S19

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth AD],
EB [auth CD]
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth AD],
EB [auth CD]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth AD],
EB [auth CD]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth AD],
EB [auth CD]
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
C [auth AD],
EB [auth CD]
IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
C [auth AD],
EB [auth CD]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth AD],
EB [auth CD]
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth AD],
EB [auth CD]
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth AD],
EB [auth CD]
IPR002171Large ribosomal subunit protein uL2Family
D [auth AE],
FB [auth CE]
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth AE],
FB [auth CE]
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
D [auth AE],
FB [auth CE]
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth AE],
FB [auth CE]
IPR000597Large ribosomal subunit protein uL3Family
E [auth AF],
GB [auth CF]
IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth AF],
GB [auth CF]
IPR002136Large ribosomal subunit protein uL4Family
E [auth AF],
GB [auth CF]
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
F [auth AG],
HB [auth CG]
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
F [auth AG],
HB [auth CG]
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
F [auth AG],
HB [auth CG]
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
F [auth AG],
HB [auth CG]
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
F [auth AG],
HB [auth CG]
IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
F [auth AG],
HB [auth CG]
IPR002132Large ribosomal subunit protein uL5Family
G [auth AH],
IB [auth CH]
IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
G [auth AH],
IB [auth CH]
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
G [auth AH],
IB [auth CH]
IPR000702Large ribosomal subunit protein uL6-likeFamily
G [auth AH],
IB [auth CH]
IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
H [auth AI],
JB [auth CI]
IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
H [auth AI],
JB [auth CI]
IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
H [auth AI],
JB [auth CI]
IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
H [auth AI],
JB [auth CI]
IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
H [auth AI],
JB [auth CI]
IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
H [auth AI],
JB [auth CI]
IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
H [auth AI],
JB [auth CI]
IPR000244Large ribosomal subunit protein bL9Family
I [auth AJ],
KB [auth CJ]
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
I [auth AJ],
KB [auth CJ]
IPR005822Large ribosomal subunit protein uL13Family
I [auth AJ],
KB [auth CJ]
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
I [auth AJ],
KB [auth CJ]
IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
J [auth AK],
LB [auth CK]
IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
J [auth AK],
LB [auth CK]
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
J [auth AK],
LB [auth CK]
IPR000218Large ribosomal subunit protein uL14Family
J [auth AK],
LB [auth CK]
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
L [auth AM],
NB [auth CM]
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth AM],
NB [auth CM]
IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
L [auth AM],
NB [auth CM]
IPR016180Large ribosomal subunit protein uL16 domainDomain
L [auth AM],
NB [auth CM]
IPR047873Large ribosomal subunit protein uL16Family
M [auth AN],
OB [auth CN]
IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
M [auth AN],
OB [auth CN]
IPR000456Large ribosomal subunit protein bL17Family
N [auth AO],
PB [auth CO]
IPR005484Large ribosomal subunit protein uL18Family
N [auth AO],
PB [auth CO]
IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
O [auth AP],
QB [auth CP]
IPR001857Large ribosomal subunit protein bL19Family
O [auth AP],
QB [auth CP]
IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
O [auth AP],
QB [auth CP]
IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
O [auth AP],
QB [auth CP]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth AQ],
RB [auth CQ]
IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
P [auth AQ],
RB [auth CQ]
IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
P [auth AQ],
RB [auth CQ]
IPR005813Large ribosomal subunit protein bL20Family
Q [auth AR],
SB [auth CR]
IPR028909Large ribosomal subunit protein bL21-likeFamily
Q [auth AR],
SB [auth CR]
IPR001787Large ribosomal subunit protein bL21Family
Q [auth AR],
SB [auth CR]
IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
R [auth AS],
TB [auth CS]
IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
R [auth AS],
TB [auth CS]
IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth AS],
TB [auth CS]
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth AS],
TB [auth CS]
IPR001063Large ribosomal subunit protein uL22Family
R [auth AS],
TB [auth CS]
IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
S [auth AT],
UB [auth CT]
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
S [auth AT],
UB [auth CT]
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
S [auth AT],
UB [auth CT]
IPR013025Large ribosomal subunit protein uL23-likeFamily
T [auth AU],
VB [auth CU]
IPR003256Large ribosomal subunit protein uL24Family
T [auth AU],
VB [auth CU]
IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
T [auth AU],
VB [auth CU]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
T [auth AU],
VB [auth CU]
IPR005824KOWDomain
T [auth AU],
VB [auth CU]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth AU],
VB [auth CU]
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
U [auth AV],
WB [auth CV]
IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
U [auth AV],
WB [auth CV]
IPR001021Ribosomal protein bL25, long-formFamily
U [auth AV],
WB [auth CV]
IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
U [auth AV],
WB [auth CV]
IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
U [auth AV],
WB [auth CV]
IPR020057Large ribosomal subunit protein bL25, beta domainDomain
U [auth AV],
WB [auth CV]
IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
U [auth AV],
WB [auth CV]
IPR050070Bacterial ribosomal protein bL25Family
V [auth AW],
XB [auth CW]
IPR001684Large ribosomal subunit protein bL27Family
V [auth AW],
XB [auth CW]
IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
X [auth AY],
ZB [auth CY]
IPR050063Universal ribosomal protein uL29Family
X [auth AY],
ZB [auth CY]
IPR001854Large ribosomal subunit protein uL29Family
X [auth AY],
ZB [auth CY]
IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
X [auth AY],
ZB [auth CY]
IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
AC [auth CZ],
Y [auth AZ]
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
AC [auth CZ],
Y [auth AZ]
IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
AC [auth CZ],
Y [auth AZ]
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
AC [auth CZ],
Y [auth AZ]
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
BC [auth C1],
Z [auth A1]
IPR002150Large ribosomal subunit protein bL31 type A/BFamily
BC [auth C1],
Z [auth A1]
IPR027491Large ribosomal subunit protein bL31 type AFamily
BC [auth C1],
Z [auth A1]
IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
BC [auth C1],
Z [auth A1]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AA [auth A2],
CC [auth C2]
IPR002677Large ribosomal subunit protein bL32Family
AA [auth A2],
CC [auth C2]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth A2],
CC [auth C2]
IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
BA [auth A3],
DC [auth C3]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth A3],
DC [auth C3]
IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BA [auth A3],
DC [auth C3]
IPR001705Large ribosomal subunit protein bL33Family
BA [auth A3],
DC [auth C3]
IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
DA [auth A5],
FC [auth C5]
IPR021137Large ribosomal subunit protein bL35-likeFamily
DA [auth A5],
FC [auth C5]
IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
DA [auth A5],
FC [auth C5]
IPR001706Large ribosomal subunit protein bL35Family
DA [auth A5],
FC [auth C5]
IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
FA [auth BB],
HC [auth DB]
IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
FA [auth BB],
HC [auth DB]
IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
FA [auth BB],
HC [auth DB]
IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
FA [auth BB],
HC [auth DB]
IPR001865Small ribosomal subunit protein uS2Family
GA [auth BC],
IC [auth DC]
IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
GA [auth BC],
IC [auth DC]
IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
GA [auth BC],
IC [auth DC]
IPR004087K Homology domainDomain
GA [auth BC],
IC [auth DC]
IPR004044K Homology domain, type 2Domain
GA [auth BC],
IC [auth DC]
IPR015946K homology domain-like, alpha/betaHomologous Superfamily
GA [auth BC],
IC [auth DC]
IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
GA [auth BC],
IC [auth DC]
IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
GA [auth BC],
IC [auth DC]
IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
HA [auth BD],
JC [auth DD]
IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
HA [auth BD],
JC [auth DD]
IPR002942RNA-binding S4 domainDomain
HA [auth BD],
JC [auth DD]
IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
HA [auth BD],
JC [auth DD]
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
HA [auth BD],
JC [auth DD]
IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
HA [auth BD],
JC [auth DD]
IPR022801Small ribosomal subunit protein uS4Family
IA [auth BE],
KC [auth DE]
IPR000851Small ribosomal subunit protein uS5Family
IA [auth BE],
KC [auth DE]
IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
IA [auth BE],
KC [auth DE]
IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
IA [auth BE],
KC [auth DE]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IA [auth BE],
KC [auth DE]
IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
IA [auth BE],
KC [auth DE]
IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
IA [auth BE],
KC [auth DE]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
JA [auth BF],
LC [auth DF]
IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
JA [auth BF],
LC [auth DF]
IPR000529Small ribosomal subunit protein bS6Family
JA [auth BF],
LC [auth DF]
IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
JA [auth BF],
LC [auth DF]
IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
JA [auth BF],
LC [auth DF]
IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
KA [auth BG],
MC [auth DG]
IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
KA [auth BG],
MC [auth DG]
IPR000235Small ribosomal subunit protein uS7Family
KA [auth BG],
MC [auth DG]
IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
KA [auth BG],
MC [auth DG]
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
KA [auth BG],
MC [auth DG]
IPR023798Small ribosomal subunit protein uS7 domainDomain
LA [auth BH],
NC [auth DH]
IPR000630Small ribosomal subunit protein uS8Family
LA [auth BH],
NC [auth DH]
IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
LA [auth BH],
NC [auth DH]
IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
MA [auth BI],
OC [auth DI]
IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
MA [auth BI],
OC [auth DI]
IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
MA [auth BI],
OC [auth DI]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
MA [auth BI],
OC [auth DI]
IPR000754Small ribosomal subunit protein uS9Family
MA [auth BI],
OC [auth DI]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
NA [auth BJ],
PC [auth DJ]
IPR001848Small ribosomal subunit protein uS10Family
NA [auth BJ],
PC [auth DJ]
IPR027486Small ribosomal subunit protein uS10 domainDomain
NA [auth BJ],
PC [auth DJ]
IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
NA [auth BJ],
PC [auth DJ]
IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
OA [auth BK],
QC [auth DK]
IPR001971Small ribosomal subunit protein uS11Family
OA [auth BK],
QC [auth DK]
IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
OA [auth BK],
QC [auth DK]
IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
OA [auth BK],
QC [auth DK]
IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
PA [auth BL],
RC [auth DL]
IPR006032Small ribosomal subunit protein uS12Family
PA [auth BL],
RC [auth DL]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
PA [auth BL],
RC [auth DL]
IPR005679Ribosomal protein uS12, bacterial-typeFamily
QA [auth BM],
SC [auth DM]
IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
QA [auth BM],
SC [auth DM]
IPR001892Small ribosomal subunit protein uS13Family
QA [auth BM],
SC [auth DM]
IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
QA [auth BM],
SC [auth DM]
IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
QA [auth BM],
SC [auth DM]
IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
SA [auth BO],
UC [auth DO]
IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
SA [auth BO],
UC [auth DO]
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
SA [auth BO],
UC [auth DO]
IPR000589Small ribosomal subunit protein uS15Family
TA [auth BP],
VC [auth DP]
IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
TA [auth BP],
VC [auth DP]
IPR000307Small ribosomal subunit protein bS16Family
UA [auth BQ],
WC [auth DQ]
IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
UA [auth BQ],
WC [auth DQ]
IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
UA [auth BQ],
WC [auth DQ]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
UA [auth BQ],
WC [auth DQ]
IPR000266Small ribosomal subunit protein uS17Family
VA [auth BR],
XC [auth DR]
IPR001648Small ribosomal subunit protein bS18Family
VA [auth BR],
XC [auth DR]
IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
VA [auth BR],
XC [auth DR]
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
XA [auth BT],
ZC [auth DT]
IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
XA [auth BT],
ZC [auth DT]
IPR002583Small ribosomal subunit protein bS20Family
AD [auth DU],
YA [auth BU]
IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
AD [auth DU],
YA [auth BU]
IPR031414Small ribosomal subunit protein bTHXFamily
K [auth AL],
MB [auth CL]
IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
K [auth AL],
MB [auth CL]
IPR021131Large ribosomal subunit protein uL15/eL18Domain
K [auth AL],
MB [auth CL]
IPR030878Large ribosomal subunit protein uL15Family
K [auth AL],
MB [auth CL]
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
K [auth AL],
MB [auth CL]
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
W [auth AX],
YB [auth CX]
IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
W [auth AX],
YB [auth CX]
IPR050096Bacterial ribosomal protein bL28Family
W [auth AX],
YB [auth CX]
IPR026569Large ribosomal subunit protein bL28Family
W [auth AX],
YB [auth CX]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
CA [auth A4],
EC [auth C4]
IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
CA [auth A4],
EC [auth C4]
IPR000271Large ribosomal subunit protein bL34Family
RA [auth BN],
TC [auth DN]
IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
RA [auth BN],
TC [auth DN]
IPR001209Small ribosomal subunit protein uS14Family
RA [auth BN],
TC [auth DN]
IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
RA [auth BN],
TC [auth DN]
IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
WA [auth BS],
YC [auth DS]
IPR002222Small ribosomal subunit protein uS19Family
WA [auth BS],
YC [auth DS]
IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
WA [auth BS],
YC [auth DS]
IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
WA [auth BS],
YC [auth DS]
IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site