3TPU | pdb_00003tpu

42F3 p5E8/H2-Ld complex

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth I]SCOP2B SuperfamilyMHC antigen-recognition domain 8034809 3000521 SCOP2B (2022-06-29)
G [auth E]SCOP2B SuperfamilyMHC antigen-recognition domain 8034809 3000521 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyMHC antigen-recognition domain 8034809 3000521 SCOP2B (2022-06-29)
O [auth Q]SCOP2B SuperfamilyMHC antigen-recognition domain 8034809 3000521 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADUF1968e3tpuA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: DUF1968ECOD (1.6)
AV-set_4e3tpuA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_4ECOD (1.6)
E [auth C]DUF1968e3tpuC2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: DUF1968ECOD (1.6)
E [auth C]V-set_4e3tpuC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_4ECOD (1.6)
I [auth G]DUF1968e3tpuG2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: DUF1968ECOD (1.6)
I [auth G]V-set_4e3tpuG1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_4ECOD (1.6)
MDUF1968e3tpuM2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: DUF1968ECOD (1.6)
MV-set_4e3tpuM1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_4ECOD (1.6)
BC1-sete3tpuB3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
BV-set_3e3tpuB4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
F [auth D]C1-sete3tpuD3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
F [auth D]V-set_3e3tpuD4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
J [auth H]C1-sete3tpuH3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
J [auth H]V-set_3e3tpuH4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
NC1-sete3tpuN3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
NV-set_3e3tpuN4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
C [auth I]MHC_Ie3tpuI1 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: MHC_IECOD (1.6)
G [auth E]MHC_Ie3tpuE1 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: MHC_IECOD (1.6)
KMHC_Ie3tpuK1 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: MHC_IECOD (1.6)
O [auth Q]MHC_Ie3tpuQ1 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: MHC_IECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
E [auth C]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
I [auth G]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
M2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
F [auth D]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
J [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
N2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
C [auth I]3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
G [auth E]3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
K3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
O [auth Q]3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A,
E [auth C],
I [auth G],
M		TR 42F3 TR-ALPHA Chimeric (chimeric) TRAV9D-3*01, TRAJ58*01, TRAC*01 V-DOMAIN V-ALPHA, C-DOMAIN C-ALPHA TR TR-ALPHA_BETA-2 IMGT (202510-0)
B,
F [auth D],
J [auth H],
N		TR 42F3 TR-BETA-2 Chimeric (chimeric) TRBV13-1*02, TRBJ2-2*01, TRBC2*01, TRBC2*02 V-DOMAIN V-BETA, C-DOMAIN C-BETA-2 TR TR-ALPHA_BETA-2 IMGT (202510-0)
C [auth I],
G [auth E],
K,
O [auth Q]		MH1 H2-Ld SBM2 G-ALPHA1-ALPHA2 Mus musculus (house mouse) H2-Ld-2 G-DOMAIN G-ALPHA1, G-DOMAIN G-ALPHA2 MH (G-ALPHA1-ALPHA2) IMGT (202510-0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth I],
G [auth E],
K,
O [auth Q]		PF00129Class I Histocompatibility antigen, domains alpha 1 and 2 (MHC_I)Class I Histocompatibility antigen, domains alpha 1 and 2Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
E [auth C],
I [auth G],
M		42F3 alpha---
B,
F [auth D],
J [auth H],
N		42F3 beta---
C [auth I],
G [auth E],
K,
O [auth Q]		H2-Ld SBM2-
D [auth J],
H [auth F],
L,
P [auth R]		p5E8 peptide---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth I],
G [auth E],
K,
O [auth Q]		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
C [auth I],
G [auth E],
K,
O [auth Q]		IPR050208Antigen-presenting and immune regulatory MHC class I-relatedFamily
C [auth I],
G [auth E],
K,
O [auth Q]		IPR037055MHC class I-like antigen recognition-like superfamilyHomologous Superfamily
C [auth I],
G [auth E],
K,
O [auth Q]		IPR003597Immunoglobulin C1-setDomain
C [auth I],
G [auth E],
K,
O [auth Q]		IPR010579MHC class I, alpha chain, C-terminalDomain
C [auth I],
G [auth E],
K,
O [auth Q]		IPR013783Immunoglobulin-like foldHomologous Superfamily
C [auth I],
G [auth E],
K,
O [auth Q]		IPR011161MHC class I-like antigen recognition-likeDomain
C [auth I],
G [auth E],
K,
O [auth Q]		IPR011162MHC classes I/II-like antigen recognition proteinHomologous Superfamily
C [auth I],
G [auth E],
K,
O [auth Q]		IPR007110Immunoglobulin-like domainDomain
C [auth I],
G [auth E],
K,
O [auth Q]		IPR001039MHC class I alpha chain, alpha1 alpha2 domainsDomain
C [auth I],
G [auth E],
K,
O [auth Q]		IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site