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3T7V
|
pdb_00003t7v
Crystal structure of methylornithine synthase (PylB)
External Resource: Annotation
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Domain Annotation: ECOD Classification
ECOD Database Homepage
Chains
Family Name
Domain Identifier
Architecture
Possible Homology
Homology
Topology
Family
Provenance Source (Version)
A
BATS
e3t7vA2
A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels (From Topology)
T: TIM barrels
F: BATS
ECOD (1.6)
Domain Annotation: CATH
CATH Database Homepage
Chain
Domain
Class
Architecture
Topology
Homology
Provenance Source (Version)
A
3.20.20.70
Alpha Beta
Alpha-Beta Barrel
TIM Barrel
Aldolase class I
CATH (4.3.0)
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
PF04055
Radical SAM superfamily (Radical_SAM)
Radical SAM superfamily
Radical SAM proteins catalyse diverse reactions, including unusual methylations, isomerisation, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation.
Domain
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
methylornithine synthase PylB
isomerase activity
catalytic activity
intramolecular transferase activity
iron-sulfur cluster binding
binding
4 iron, 4 sulfur cluster binding
metal cluster binding
small molecule binding
cation binding
ion binding
metal ion binding
transferase activity
oxoacid metabolic process
small molecule biosynthetic process
modified amino acid biosynthetic process
modified amino acid metabolic process
carboxylic acid metabolic process
amide biosynthetic process
amino acid metabolic process
primary metabolic process
organic acid metabolic process
organic acid biosynthetic process
carboxylic acid biosynthetic process
proteinogenic amino acid metabolic process
amino acid biosynthetic process
biosynthetic process
oxoacid metabolic process
small molecule biosynthetic process
modified amino acid biosynthetic process
modified amino acid metabolic process
carboxylic acid metabolic process
amide biosynthetic process
amino acid metabolic process
primary metabolic process
organic acid metabolic process
organic acid biosynthetic process
carboxylic acid biosynthetic process
proteinogenic amino acid metabolic process
amino acid biosynthetic process
biosynthetic process
proteinogenic amino acid biosynthetic process
metabolic process
cellular process
small molecule metabolic process
pyrrolysine biosynthetic process
amide metabolic process
pyrrolysine metabolic process
Less
-
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR007197
Radical SAM
Domain
A
IPR034422
HydE/PylB-like
Family
A
IPR006638
Elp3/MiaA/NifB-like, radical SAM core domain
Domain
A
IPR013785
Aldolase-type TIM barrel
Homologous Superfamily
A
IPR023891
Pyrrolysine biosynthesis protein PylB
Family
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