2IAZ | pdb_00002iaz

Crystal structure of a Conserved Protein of Unknown Function SP1372 from Streptococcus pneumoniae

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2iaza1	All alpha proteins	YheA-like	YheA/YmcA-like	YheA-like	Hypothetical protein SP1372	(Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ],	SCOPe (2.08)
A	d2iaza2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ],	SCOPe (2.08)
B	d2iazb2	All alpha proteins	YheA-like	YheA/YmcA-like	YheA-like	Hypothetical protein SP1372	(Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ],	SCOPe (2.08)
B	d2iazb3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ],	SCOPe (2.08)
C	d2iazc_	All alpha proteins	YheA-like	YheA/YmcA-like	YheA-like	Hypothetical protein SP1372	(Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ],	SCOPe (2.08)
D	d2iazd2	All alpha proteins	YheA-like	YheA/YmcA-like	YheA-like	Hypothetical protein SP1372	(Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ],	SCOPe (2.08)
D	d2iazd3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	YheA/YmcA-like	8034461	3001682	SCOP2B (2022-06-29)
B	SCOP2 Family	YheA-like	8022081	4001490	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	YheA/YmcA-like	8034461	3001682	SCOP2 (2022-06-29)
C	SCOP2B Superfamily	YheA/YmcA-like	8034461	3001682	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	YheA/YmcA-like	8034461	3001682	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Com_YlbF	e2iazA1	A: alpha duplicates or obligate multimers	X: YheA/YmcA-like	H: YheA/YmcA-like (From Topology)	T: YheA/YmcA-like	F: Com_YlbF	ECOD (1.6)
B	Com_YlbF	e2iazB1	A: alpha duplicates or obligate multimers	X: YheA/YmcA-like	H: YheA/YmcA-like (From Topology)	T: YheA/YmcA-like	F: Com_YlbF	ECOD (1.6)
C	Com_YlbF	e2iazC1	A: alpha duplicates or obligate multimers	X: YheA/YmcA-like	H: YheA/YmcA-like (From Topology)	T: YheA/YmcA-like	F: Com_YlbF	ECOD (1.6)
D	Com_YlbF	e2iazD1	A: alpha duplicates or obligate multimers	X: YheA/YmcA-like	H: YheA/YmcA-like (From Topology)	T: YheA/YmcA-like	F: Com_YlbF	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.1500.10	Mainly Alpha	Up-down Bundle	YheA-like fold	YheA/YmcA-like	CATH (4.3.0)
B	1.20.1500.10	Mainly Alpha	Up-down Bundle	YheA-like fold	YheA/YmcA-like	CATH (4.3.0)
C	1.20.1500.10	Mainly Alpha	Up-down Bundle	YheA-like fold	YheA/YmcA-like	CATH (4.3.0)
D	1.20.1500.10	Mainly Alpha	Up-down Bundle	YheA-like fold	YheA/YmcA-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF06133	Control of competence regulator ComK, YlbF/YmcA (Com_YlbF)	Control of competence regulator ComK, YlbF/YmcA	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR023378	YheA/YmcA-like domain superfamily	Homologous Superfamily
A, B, C, D	IPR010368	Control of competence regulator ComK, YlbF/YmcA	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.