2GJX
Crystallographic structure of human beta-Hexosaminidase A
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Structure Motif: Primary M-CSA Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | beta-N-acetylhexosaminidase catalytic domain | 8020520 | 4003199 | SCOP2 (2022-06-29) |
A | SCOP2 Family | beta-N-acetylhexosaminidase domain | 8020521 | 4001646 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | (Trans)glycosidases | 8032900 | 3000313 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | beta-N-acetylhexosaminidase-like domain | 8032901 | 3000192 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | (Trans)glycosidases | 8032900 | 3000313 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | beta-N-acetylhexosaminidase-like domain | 8032901 | 3000192 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | beta-N-acetylhexosaminidase-like domain | 8032901 | 3000192 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | (Trans)glycosidases | 8032900 | 3000313 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | beta-N-acetylhexosaminidase-like domain | 8032901 | 3000192 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | (Trans)glycosidases | 8032900 | 3000313 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | (Trans)glycosidases | 8037318 | 3000313 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | beta-N-acetylhexosaminidase-like domain | 8037319 | 3000192 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | beta-N-acetylhexosaminidase-like domain | 8037319 | 3000192 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | (Trans)glycosidases | 8037318 | 3000313 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | (Trans)glycosidases | 8037318 | 3000313 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | beta-N-acetylhexosaminidase-like domain | 8037319 | 3000192 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | (Trans)glycosidases | 8037318 | 3000313 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | beta-N-acetylhexosaminidase-like domain | 8037319 | 3000192 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Glyco_hydro_20 | e2gjxA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_20 | ECOD (1.6) |
A | Glycohydro_20b2 | e2gjxA2 | A: mixed a+b and a/b | X: Zincin-like | H: beta-N-acetylhexosaminidase-like domain (From Topology) | T: beta-N-acetylhexosaminidase-like domain | F: Glycohydro_20b2 | ECOD (1.6) |
D | Glyco_hydro_20 | e2gjxD1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_20 | ECOD (1.6) |
D | Glycohydro_20b2 | e2gjxD2 | A: mixed a+b and a/b | X: Zincin-like | H: beta-N-acetylhexosaminidase-like domain (From Topology) | T: beta-N-acetylhexosaminidase-like domain | F: Glycohydro_20b2 | ECOD (1.6) |
E | Glyco_hydro_20 | e2gjxE1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_20 | ECOD (1.6) |
E | Glycohydro_20b2 | e2gjxE2 | A: mixed a+b and a/b | X: Zincin-like | H: beta-N-acetylhexosaminidase-like domain (From Topology) | T: beta-N-acetylhexosaminidase-like domain | F: Glycohydro_20b2 | ECOD (1.6) |
H | Glyco_hydro_20 | e2gjxH1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_20 | ECOD (1.6) |
H | Glycohydro_20b2 | e2gjxH2 | A: mixed a+b and a/b | X: Zincin-like | H: beta-N-acetylhexosaminidase-like domain (From Topology) | T: beta-N-acetylhexosaminidase-like domain | F: Glycohydro_20b2 | ECOD (1.6) |
C | Glyco_hydro_20 | e2gjxC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_20 | ECOD (1.6) |
C | Glycohydro_20b2 | e2gjxC2 | A: mixed a+b and a/b | X: Zincin-like | H: beta-N-acetylhexosaminidase-like domain (From Topology) | T: beta-N-acetylhexosaminidase-like domain | F: Glycohydro_20b2 | ECOD (1.6) |
F | Glyco_hydro_20 | e2gjxF1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_20 | ECOD (1.6) |
F | Glycohydro_20b2 | e2gjxF2 | A: mixed a+b and a/b | X: Zincin-like | H: beta-N-acetylhexosaminidase-like domain (From Topology) | T: beta-N-acetylhexosaminidase-like domain | F: Glycohydro_20b2 | ECOD (1.6) |
G | Glyco_hydro_20 | e2gjxG1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_20 | ECOD (1.6) |
G | Glycohydro_20b2 | e2gjxG2 | A: mixed a+b and a/b | X: Zincin-like | H: beta-N-acetylhexosaminidase-like domain (From Topology) | T: beta-N-acetylhexosaminidase-like domain | F: Glycohydro_20b2 | ECOD (1.6) |
B | Glyco_hydro_20 | e2gjxB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_20 | ECOD (1.6) |
B | Glycohydro_20b2 | e2gjxB2 | A: mixed a+b and a/b | X: Zincin-like | H: beta-N-acetylhexosaminidase-like domain (From Topology) | T: beta-N-acetylhexosaminidase-like domain | F: Glycohydro_20b2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14845 | beta-acetyl hexosaminidase like (Glycohydro_20b2) | beta-acetyl hexosaminidase like | - | Domain | |
PF00728 | Glycosyl hydrolase family 20, catalytic domain (Glyco_hydro_20) | Glycosyl hydrolase family 20, catalytic domain | This domain has a TIM barrel fold. | Domain | |
PF14845 | beta-acetyl hexosaminidase like (Glycohydro_20b2) | beta-acetyl hexosaminidase like | - | Domain | |
PF00728 | Glycosyl hydrolase family 20, catalytic domain (Glyco_hydro_20) | Glycosyl hydrolase family 20, catalytic domain | This domain has a TIM barrel fold. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029019 | Beta-hexosaminidase, eukaryotic type, N-terminal | Domain | |
IPR015883 | Glycoside hydrolase family 20, catalytic domain | Domain | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR029018 | Beta-hexosaminidase-like, domain 2 | Homologous Superfamily | |
IPR025705 | Beta-hexosaminidase | Family | |
IPR029019 | Beta-hexosaminidase, eukaryotic type, N-terminal | Domain | |
IPR015883 | Glycoside hydrolase family 20, catalytic domain | Domain | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR029018 | Beta-hexosaminidase-like, domain 2 | Homologous Superfamily | |
IPR025705 | Beta-hexosaminidase | Family |
Pharos: Disease Associations Pharos Homepage Annotation
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
Chains | Enzyme Name | Description | Catalytic Residues |
---|---|---|---|
beta-N-acetylhexosaminidase M-CSA #899 | Chitin, the second most abundant polysaccharide on earth, is degraded by chitinases and chitobiases. This entry represents the glycosidase family 20 chitobiase which digests the beta-1,4-glycosidic bonds in N-acetylglucosamine (GlcNAc) oligomers (mainly dimers). It has a retaining mechanism. Human beta-hexosaminidase A | Defined by 2 residues: ASP:A-300 [auth A-322]GLU:A-301 [auth A-323] | EC: 3.2.1.52 (PDB Primary Data) |