1KGY
Crystal Structure of the EphB2-ephrinB2 complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | galactose-binding domain-like | 8039463 | 3000087 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | galactose-binding domain-like | 8039463 | 3000087 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | galactose-binding domain-like | 8039463 | 3000087 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | galactose-binding domain-like | 8039463 | 3000087 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Cupredoxins | 8039593 | 3000886 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Cupredoxins | 8039593 | 3000886 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Cupredoxins | 8039593 | 3000886 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Cupredoxins | 8039593 | 3000886 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ephrin_lbd | e1kgyA1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: Ephrin_lbd | ECOD (1.6) |
B | Ephrin_lbd | e1kgyB1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: Ephrin_lbd | ECOD (1.6) |
C | Ephrin_lbd | e1kgyC1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: Ephrin_lbd | ECOD (1.6) |
D | Ephrin_lbd | e1kgyD1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: Ephrin_lbd | ECOD (1.6) |
H | Ephrin | e1kgyH1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Ephrin | ECOD (1.6) |
E | Ephrin | e1kgyE1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Ephrin | ECOD (1.6) |
F | Ephrin | e1kgyF1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Ephrin | ECOD (1.6) |
G | Ephrin | e1kgyG1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Ephrin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
B | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
C | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
D | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
H | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
E | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
F | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
G | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01404 | Ephrin receptor ligand binding domain (Ephrin_lbd) | Ephrin receptor ligand binding domain | The Eph receptors, which bind to ephrins Pfam:PF00812 are a large family of receptor tyrosine kinases. This family represents the amino terminal domain which binds the ephrin ligand [1]. | Domain | |
PF00812 | Ephrin (Ephrin) | Ephrin | - | Domain |