2GP1 | pdb_00002gp1

Bacteriophage HK97 Prohead II crystal structure

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 5.20 Å
  • R-Value Work: 
    0.410 (Depositor), 0.370 (DCC) 
  • R-Value Observed: 
    0.410 (Depositor) 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


This is version 2.1 of the entry. See complete history. 


Literature

Structure and Flexibility of Bacteriophage HK97 Pre-expanded State Prohead II

Gertsman, I., Gan, L., Wikoff, W., Guttman, M., Duda, R.L., Hendrix, R.W., Komives, E.A., Johnson, J.E.

To be published.

Macromolecules
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Major capsid protein
A, B, C, D, E
282Byrnievirus HK97Mutation(s): 1 
Gene Names: 5
UniProt
Find proteins for P49861 (Enterobacteria phage HK97)
Explore P49861 
Go to UniProtKB:  P49861
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP49861
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 5.20 Å
  • R-Value Work:  0.410 (Depositor), 0.370 (DCC) 
  • R-Value Observed: 0.410 (Depositor) 
Space Group: P 21 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 706.94α = 90
b = 706.94β = 90
c = 706.94γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
RAVEmodel building
CNSrefinement
RAVEphasing

Structure Validation

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View more in-depth experimental data
Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2006-05-02
    Type: Initial release
  • Version 1.1: 2008-04-29
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2021-10-20
    Changes: Database references, Refinement description
  • Version 2.0: 2023-04-19
    Type: Remediation
    Changes: Advisory, Atomic model, Data collection, Derived calculations, Other, Refinement description
  • Version 2.1: 2023-09-20
    Changes: Data collection, Refinement description