Download MendeleyCrystal structure of an oxidoreductase/ short chain dehydrogenase from Brucella ovis
Lukacs, C.M., Edwards, T.E., Lorimer, D.D.To be published.
4X54 | pdb_00004x54
Crystal structure of an oxidoreductase (short chain dehydrogenase/reductase) from Brucella ovis
- PDB DOI: https://doi.org/10.2210/pdb4X54/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Brucella ovis ATCC 25840
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2014-12-04 Released: 2015-02-25
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.45 Å
- R-Value Free: 0.173 (Depositor), 0.170 (DCC)
- R-Value Work: 0.155 (Depositor), 0.160 (DCC)
- R-Value Observed: 0.156 (Depositor)
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Oxidoreductase, short chain dehydrogenase/reductase family | 276 | Brucella ovis ATCC 25840 | Mutation(s): 0 Gene Names: BOV_0113 |  | |
UniProt | |||||
Find proteins for A0A0H3AQ75 (Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)) Explore A0A0H3AQ75 Go to UniProtKB: A0A0H3AQ75 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0H3AQ75 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MPD Query on MPD | B [auth A], C [auth A] | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.45 Å
- R-Value Free: 0.173 (Depositor), 0.170 (DCC)
- R-Value Work: 0.155 (Depositor), 0.160 (DCC)
- R-Value Observed: 0.156 (Depositor)
Diffraction Data: https://doi.org/10.18430/M34X54
Space Group: I 2 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 53.19 | α = 90 |
| b = 100.88 | β = 90 |
| c = 101.41 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| XSCALE | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2015-02-25 Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Revision History (Full details and data files)
- Version 1.0: 2015-02-25
Type: Initial release - Version 1.1: 2024-02-28
Changes: Data collection, Database references, Derived calculations, Source and taxonomy, Structure summary
