Download MendeleyCrystal structure of Coh3ScaB-XDoc_M1ScaA complex: A N-terminal interface mutant of type II Cohesin-X-Dockerin complex from Acetivibrio cellulolyticus
Alves, V.D., Cameron, K., Najmudin, S.H., Fontes, C.M.G.A.To be published.
4U3S | pdb_00004u3s
Crystal structure of Coh3ScaB-XDoc_M1ScaA complex: A N-terminal interface mutant of type II Cohesin-X-Dockerin complex from Acetivibrio cellulolyticus
- PDB DOI: https://doi.org/10.2210/pdb4U3S/pdb
- Classification: PROTEIN BINDING
- Organism(s): Acetivibrio cellulolyticus
- Expression System: Escherichia coli BL21
- Mutation(s): Yes
- Deposited: 2014-07-22 Released: 2015-07-29
- Funding Organization(s): FCT
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.64 Å
- R-Value Free: 0.206 (Depositor), 0.220 (DCC)
- R-Value Work: 0.171 (Depositor), 0.180 (DCC)
- R-Value Observed: 0.173 (Depositor)
Starting Models: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Cellulosomal scaffoldin adaptor protein B | 168 | Acetivibrio cellulolyticus | Mutation(s): 0 Gene Names: scaB |  | |
UniProt | |||||
Find proteins for Q7WYN3 (Acetivibrio cellulolyticus) Explore Q7WYN3 Go to UniProtKB: Q7WYN3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q7WYN3 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Cellulosomal scaffoldin | 184 | Acetivibrio cellulolyticus | Mutation(s): 1 Gene Names: cipV EC: 3.2.1.4 |  | |
UniProt | |||||
Find proteins for Q9RPL0 (Acetivibrio cellulolyticus) Explore Q9RPL0 Go to UniProtKB: Q9RPL0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9RPL0 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NHE Query on NHE | C [auth A], D [auth A], G [auth B] | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID C8 H17 N O3 S MKWKNSIESPFAQN-UHFFFAOYSA-N |  | ||
| CA Query on CA | E [auth B], F [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.64 Å
- R-Value Free: 0.206 (Depositor), 0.220 (DCC)
- R-Value Work: 0.171 (Depositor), 0.180 (DCC)
- R-Value Observed: 0.173 (Depositor)
Space Group: P 65 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 72.32 | α = 90 |
| b = 72.32 | β = 90 |
| c = 231.49 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| XDS | data reduction |
| Aimless | data scaling |
| BALBES | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2015-07-29 Deposition Author(s): Alves, V.D., Cameron, K., Najmudin, S.H., Fontes, C.M.G.A.
| Funding Organization | Location | Grant Number |
|---|---|---|
| FCT | Portugal | EXPL/BIA-MIC/1176/2012 |
Revision History (Full details and data files)
- Version 1.0: 2015-07-29
Type: Initial release - Version 1.1: 2023-12-20
Changes: Data collection, Database references, Refinement description
