RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Space Group = "P 43 2 2"

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 574 Structures.

Refinements

Structure Determination Methodology

experimental (574)

Scientific Name of Source Organism

	Zika virus (113)
	Homo sapiens (91)
	Saccharomyces cerevisiae (36)
	Escherichia coli (25)
	synthetic construct (22)
	Bacillus subtilis (20)
	Mus musculus (18)
	Geobacter sulfurreducens (11)
	Vibrio cholerae (8)
	Escherichia coli K-12 (7)

More...

Taxonomy

	Bacteria (211)
	Eukaryota (206)
	Riboviria (127)
	other sequences (23)
	Archaea (14)
	Duplodnaviria (4)
	Eukaryota (eukaryotes) (2)

Experimental Method

X-RAY DIFFRACTION (574)

Polymer Entity Type

	Protein (559)
	DNA (37)
	RNA (15)

Refinement Resolution (Å)

	1.0 - 1.5 (48)
	1.5 - 2.0 (165)
	2.0 - 2.5 (175)
	2.5 - 3.0 (121)
	3.0 - 3.5 (41)
	3.5 - 4.0 (16)
	4.0 - 4.5 (4)
	> 4.5 (4)

Release Date

	1990 - 1994 (2)
	1995 - 1999 (21)
	2000 - 2004 (46)
	2005 - 2009 (80)
	2010 - 2014 (122)
	2015 - 2019 (94)
	2020 - 2024 (157)
	2025 - 2029 (52)

Enzyme Classification Name

	Hydrolases (169)
	Transferases (63)
	Oxidoreductases (31)
	Ligases (23)
	Lyases (21)
	Isomerases (7)
	Translocases (5)

Membrane Protein Annotation

	OPM (2)
	MemProtMD (1)
	PDBTM (1)
	mpstruc (1)

Symmetry Type

	Asymmetric (331)
	Cyclic (218)
	Dihedral (41)
	Icosahedral (2)
	Helical (1)
	Tetrahedral (1)

SCOP Classification

	Alpha and beta proteins (a+b) (94)
	All beta proteins (68)
	Alpha and beta proteins (a/b) (67)
	All alpha proteins (55)
	Artifacts (41)
	Small proteins (18)
	Low resolution protein structures (1)
	Coiled coil proteins (2)
	Membrane and cell surface proteins and peptides (1)
	Multi-domain proteins (alpha and beta) (2)

AllSelected

1 to 25 of 574 Structures

Page 1 of 23

Sort by

Explore in 3D

1914 \| pdb_00001914	Download File View File

SIGNAL RECOGNITION PARTICLE ALU RNA BINDING HETERODIMER, SRP9/14

Birse, D., Kapp, U., Strub, K., Cusack, S., Aberg, A.

(1997) EMBO J 16: 3757-3766

Released	1998-12-30
Method	X-RAY DIFFRACTION 2.53 Å
Organisms	Mus musculus
Macromolecule	SIGNAL RECOGNITION PARTICLE 9/14 FUSION PROTEIN (protein)
Unique Ligands	BME, PO4

Explore in 3D

1A4H \| pdb_00001a4h	Download File View File

STRUCTURE OF THE N-TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE IN COMPLEX WITH GELDANAMYCIN

Prodromou, C., Roe, S.M., Pearl, L.H.

(1997) Cell 90: 65-75

Released	1998-08-05
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	HEAT SHOCK PROTEIN 90 (protein)
Unique Ligands	GDM

Explore in 3D

1AH6 \| pdb_00001ah6	Download File View File

STRUCTURE OF THE TETRAGONAL FORM OF THE N-TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE

Prodromou, C., Roe, S.M., Pearl, L.H.

(1997) Nat Struct Biol 4: 477-482

Released	1997-10-22
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	HEAT SHOCK PROTEIN 90 (protein)

Explore in 3D

1AM1 \| pdb_00001am1	Download File View File

ATP BINDING SITE IN THE HSP90 MOLECULAR CHAPERONE

Pearl, L.H., Roe, S.M., Prodromou, C.

(1997) Cell 90: 65-75

Released	1998-06-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	HEAT SHOCK PROTEIN 90 (protein)
Unique Ligands	ADP

Explore in 3D

1AMW \| pdb_00001amw	Download File View File

ADP BINDING SITE IN THE HSP90 MOLECULAR CHAPERONE

Pearl, L.H., Roe, S.M., Prodromou, C.

(1997) Cell 90: 65-75

Released	1998-06-24
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	HEAT SHOCK PROTEIN 90 (protein)
Unique Ligands	ADP

Explore in 3D

1B01 \| pdb_00001b01	Download File View File

TRANSCRIPTIONAL REPRESSOR COPG/DNA COMPLEX

Gomis-Rueth, F.X., Sola, M., Acebo, P., Parraga, A., Guasch, A., Eritja, R., Gonzalez, A., Espinosa, M., del Solar, G., Coll, M.

(1998) EMBO J 17: 7404-7415

Released	1999-11-19
Method	X-RAY DIFFRACTION 2.56 Å
Organisms	Streptococcus agalactiae
Macromolecule	TRANSCRIPTIONAL REPRESSOR COPG (protein) DNA (5'-D(CPCPCPGPTPGPCPAPCPTPCPAPAPTPGPCPAPAPT)-3') (nucleic acid) DNA (5'-D(GPAPTPTPGPCPAPTPTPGPAPGPTPGPCPAPCPGPG)-3') (nucleic acid)

Explore in 3D

1B0F \| pdb_00001b0f	Download File View File

CRYSTAL STRUCTURE OF HUMAN NEUTROPHIL ELASTASE WITH MDL 101, 146

Schreuder, H.A., Metz, W.A., Peet, N.P., Pelton, J.T., Tardif, C.

(1998) J Med Chem 41: 2461-2480

Released	1998-11-09
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (ELASTASE) (protein)
Unique Ligands	SEI
Unique branched monosaccharides	FUC, NAG

Explore in 3D

1BGQ \| pdb_00001bgq	Download File View File

RADICICOL BOUND TO THE ATP BINDING SITE OF THE N-TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE

Roe, S.M., Prodromou, C., Pearl, L.H.

(1999) J Med Chem 42: 260-266

Released	1999-06-08
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	HEAT SHOCK PROTEIN 90 (protein)
Unique Ligands	RDC

Explore in 3D

1BUN \| pdb_00001bun	Download File View File

STRUCTURE OF BETA2-BUNGAROTOXIN: POTASSIUM CHANNEL BINDING BY KUNITZ MODULES AND TARGETED PHOSPHOLIPASE ACTION

Kwong, P.D., Mcdonald, N.Q., Sigler, P.B., Hendrickson, W.A.

(1995) Structure 3: 1109-1119

Released	1996-04-03
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Bungarus multicinctus
Macromolecule	BETA2-BUNGAROTOXIN (protein)
Unique Ligands	NA

Explore in 3D

1BVB \| pdb_00001bvb	Download File View File

HEME-PACKING MOTIFS REVEALED BY THE CRYSTAL STRUCTURE OF CYTOCHROME C554 FROM NITROSOMONAS EUROPAEA

Iverson, T.M., Arciero, D.M., Hsu, B.T., Logan, M.S.P., Hooper, A.B., Rees, D.C.

(1998) Nat Struct Biol 5: 1005-1012

Released	1999-05-18
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Nitrosomonas europaea
Macromolecule	CYTOCHROME C-554 (protein)
Unique Ligands	HEM, PO4

Explore in 3D

1BVO \| pdb_00001bvo	Download File View File

DORSAL HOMOLOGUE GAMBIF1 BOUND TO DNA

Cramer, P., Varrot, A., Barillas-Mury, C., Kafatos, F.C., Mueller, C.W.

(1999) Structure 7: 841-852

Released	1999-07-12
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Anopheles gambiae
Macromolecule	TRANSCRIPTION FACTOR GAMBIF1 (protein) DNA DUPLEX (nucleic acid)

Explore in 3D

1CQI \| pdb_00001cqi	Download File View File

Crystal Structure of the Complex of ADP and MG2+ with Dephosphorylated E. Coli Succinyl-CoA Synthetase

Joyce, M.A., Fraser, M.E., James, M.N.G., Bridger, W.A., Wolodko, W.T.

(2000) Biochemistry 39: 17-25

Released	2000-01-07
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Escherichia coli
Macromolecule	PROTEIN (SUCCINYL-COA SYNTHETASE ALPHA CHAIN) (protein) PROTEIN (SUCCINYL-COA SYNTHETASE BETA CHAIN) (protein)
Unique Ligands	ADP, COA, MG, PO4

Explore in 3D

1CQJ \| pdb_00001cqj	Download File View File

CRYSTAL STRUCTURE OF DEPHOSPHORYLATED E. COLI SUCCINYL-COA SYNTHETASE

Joyce, M.A., Fraser, M.E., James, M.N.G., Bridger, W.A., Wolodko, W.T.

(2000) Biochemistry 39: 17-25

Released	2000-01-10
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Escherichia coli
Macromolecule	SUCCINYL-COA SYNTHETASE ALPHA CHAIN (protein) SUCCINYL-COA SYNTHETASE BETA CHAIN (protein)
Unique Ligands	COA, PO4

Explore in 3D

1DYT \| pdb_00001dyt	Download File View File

X-ray crystal structure of ECP (RNase 3) at 1.75 A

Mallorqui-Fernandez, G., Pous, J., Peracaula, R., Maeda, T., Tada, H., Yamada, H., Seno, M., De Llorens, R., Gomis-Rueth, F.X., Coll, M.

(2000) J Mol Biology 300: 1297

Released	2001-02-08
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	EOSINOPHIL CATIONIC PROTEIN (protein)
Unique Ligands	CIT, FE

Explore in 3D

1EXI \| pdb_00001exi	Download File View File

CRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND TO 21 BASE PAIR BMR OPERATOR AND TPSB

Zheleznova-Heldwein, E.E., Brennan, R.G.

(2001) Nature 409: 378-382

Released	2001-01-24
Method	X-RAY DIFFRACTION 3.12 Å
Organisms	Bacillus subtilis
Macromolecule	MULTIDRUG-EFFLUX TRANSPORTER REGULATOR (protein) DNA (5'-D(APCPCPCPTPCPCPCPCPTPTPAPGPGPGPGPAPGPGPGP*T)-3') (nucleic acid)
Unique Ligands	118, ZN

Explore in 3D

1EXJ \| pdb_00001exj	Download File View File

CRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND TO 21 BASE PAIR BMR OPERATOR AND TPP

Zheleznova-Heldwein, E.E., Brennan, R.G.

(2001) Nature 409: 378-382

Released	2001-01-24
Method	X-RAY DIFFRACTION 3 Å
Organisms	Bacillus subtilis
Macromolecule	MULTIDRUG-EFFLUX TRANSPORTER REGULATOR (protein) DNA (5'-D(APCPCPCPTPCPCPCPCPTPTPAPGPGPGPGPAPGPGPGP*T)-3') (nucleic acid)
Unique Ligands	NA, P4P, ZN

Explore in 3D

1FIX \| pdb_00001fix	Download File View File

THE STRUCTURE OF AN RNA/DNA HYBRID: A SUBSTRATE OF THE RIBONUCLEASE ACTIVITY OF HIV-1 REVERSE TRANSCRIPTASE

Horton, N.C., Finzel, B.C.

(1996) J Mol Biology 264: 521-533

Released	1996-12-11
Method	X-RAY DIFFRACTION 2.3 Å
Macromolecule	DNA (5'-D(GPGPCPGPCPCPCPGPAPA)-3') (nucleic acid) RNA (5'-R(UPUPCPGPGPGPCPGPCPC)-3') (nucleic acid)

Explore in 3D

1FLC \| pdb_00001flc	Download File View File

X-RAY STRUCTURE OF THE HAEMAGGLUTININ-ESTERASE-FUSION GLYCOPROTEIN OF INFLUENZA C VIRUS

Rosenthal, P.B., Zhang, X., Formanowski, F., Fitz, W., Wong, C.H., Meier-Ewert, H., Skehel, J.J., Wiley, D.C.

(1998) Nature 396: 92-96

Released	2000-03-01
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Influenza C virus (C/Johannesburg/1/66)
Macromolecule	HAEMAGGLUTININ-ESTERASE-FUSION GLYCOPROTEIN (protein)
Unique branched monosaccharides	BMA, MAN, NAG, NDG

Explore in 3D

1FVP \| pdb_00001fvp	Download File View File

FLAVOPROTEIN 390

Kita, A., Miki, K.

(1996) Acta Crystallogr D Biol Crystallogr 52: 77-86

Released	1995-10-15
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Photobacterium phosphoreum
Macromolecule	FLAVOPROTEIN 390 (protein)
Unique Ligands	FMA

Explore in 3D

1G2N \| pdb_00001g2n	Download File View File

CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAIN OF THE ULTRASPIRACLE PROTEIN USP, THE ORTHOLOG OF RXRS IN INSECTS

Billas, I.M.L., Moulinier, L., Rochel, N., Moras, D., Structural Proteomics in Europe (SPINE)

(2001) J Biological Chem 276: 7465-7474

Released	2001-04-21
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Heliothis virescens
Macromolecule	ULTRASPIRACLE PROTEIN (protein)
Unique Ligands	EPH

Explore in 3D

1GTD \| pdb_00001gtd	Download File View File

NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG ID TT50) STRUCTURE OF MTH169, THE PURS SUBUNIT OF FGAM SYNTHETASE

Batra, R., Christendat, D., Saxild, H.H., Arrowsmith, C., Tong, L.

(2002) Proteins 49: 285

Released	2002-12-12
Method	X-RAY DIFFRACTION 2.56 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	MTH169 (protein)

Explore in 3D

1H1B \| pdb_00001h1b	Download File View File

Crystal structure of human neutrophil elastase complexed with an inhibitor (GW475151)

Macdonald, S.J.F., Dowle, M.D., Harrison, L.A., Clarke, G.D.E., Inglis, G.G.A., Johnson, M.R., Smith, R.A., Amour, A., Fleetwood, G., Humphreys, D.C., Molloy, C.R., Dixon, M., Godward, R.E., Wonacott, A.J., Singh, O.M.P., Hodgson, S.T., Hardy, G.W.

(2002) J Med Chem 45: 3878

Released	2002-08-29
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	LEUKOCYTE ELASTASE (protein)
Unique Ligands	151
Unique branched monosaccharides	FUC, NAG