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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "PROTEIN TRANSPORT"

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Search Summary

This query matches 51 Structures.

Refinements

Structure Determination Methodology

experimental (51)

Scientific Name of Source Organism

	Homo sapiens (23)
	Gloeobacter violaceus PCC 7421 (3)
	Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE) (3)
	Cyanidioschyzon sp. 5508 (2)
	Desulfocurvibacter africanus (2)
	Leishmania orientalis (2)
	synthetic construct (2)
	Acidithiobacillus ferrooxidans (1)
	Arabidopsis thaliana (1)
	Aspergillus terreus (1)

More...

Taxonomy

	Eukaryota (32)
	Bacteria (11)
	Riboviria (4)
	other sequences (2)
	Archaea (1)
	Duplodnaviria (1)
	Eukaryota (eukaryotes) (1)

Experimental Method

X-RAY DIFFRACTION (51)

Polymer Entity Type

	Protein (50)
	DNA (3)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (18)
	2.0 - 2.5 (19)
	2.5 - 3.0 (8)
	3.0 - 3.5 (1)
	3.5 - 4.0 (2)

Release Date

	2000 - 2004 (8)
	2005 - 2009 (12)
	2010 - 2014 (16)
	2015 - 2019 (6)
	2020 - 2024 (9)

Enzyme Classification Name

	Hydrolases (13)
	Transferases (9)
	Isomerases (4)
	Oxidoreductases (2)

Membrane Protein Annotation

	MemProtMD (3)
	PDBTM (3)
	mpstruc (3)

Symmetry Type

	Asymmetric (29)
	Cyclic (26)
	Dihedral (4)
	Octahedral (1)
	Tetrahedral (1)

SCOP Classification

	All alpha proteins (15)
	Alpha and beta proteins (a/b) (10)
	All beta proteins (4)
	Alpha and beta proteins (a+b) (3)
	Artifacts (3)
	Designed proteins (1)

AllSelected

1 to 25 of 51 Structures

Page 1 of 3

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1F0J \| pdb_00001f0j	Download File View File

CATALYTIC DOMAIN OF HUMAN PHOSPHODIESTERASE 4B2B

Xu, R.X., Hassell, A.M., Vanderwall, D., Lambert, M.H., Holmes, W.D., Luther, M.A., Rocque, W.J., Milburn, M.V., Zhao, Y., Ke, H., Nolte, R.T.

(2000) Science 288: 1822-1825

Released	2000-07-26
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Homo sapiens
Macromolecule	PHOSPHODIESTERASE 4B (protein)
Unique Ligands	ARS, MG, ZN

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1NLX \| pdb_00001nlx	Download File View File

Crystal Structure of PHL P 6, A Major Timothy Grass Pollen Allergen Co-Crystallized with Zinc

Fedorov, A.A., Ball, T., Fedorov, E.V., Vrtala, S., Valenta, R., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2003-01-21
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Phleum pratense
Macromolecule	Pollen allergen Phl p 6 (protein)
Unique Ligands	ARS, ZN

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1NQ0 \| pdb_00001nq0	Download File View File

TR Receptor Mutations Conferring Hormone Resistance and Reduced Corepressor Release Exhibit Decreased Stability in the Nterminal LBD

Huber, B.R., Desclozeaux, M., West, B.L., Cunha-Lima, S.T., Nguyen, H.T., Baxter, J.D., Ingraham, H.A., Fletterick, R.J.

(2003) Mol Endocrinol 17: 107-116

Released	2003-04-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Thyroid hormone receptor beta-1 (protein)
Unique Ligands	4HY, ARS

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1NQ1 \| pdb_00001nq1	Download File View File

TR Receptor Mutations Conferring Hormone Resistance and Reduced Corepressor Release Exhibit Decreased Stability in the Nterminal LBD

Huber, B.R., Desclozeaux, M., West, B.L., Cunha-Lima, S.T., Nguyen, H.T., Baxter, J.D., Ingraham, H.A., Fletterick, R.J.

(2003) Mol Endocrinol 17: 107-116

Released	2003-04-15
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Thyroid hormone receptor beta-1 (protein)
Unique Ligands	4HY, ARS

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1NQ2 \| pdb_00001nq2	Download File View File

Two RTH Mutants with Impaired Hormone Binding

Huber, B.R., Sandler, B., West, B.L., Cunha-Lima, S.T., Nguyen, H.T., Apriletti, J.W., Baxter, J.D., Fletterick, R.J.

(2003) Mol Endocrinol 17: 643-652

Released	2003-04-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Thyroid hormone receptor beta-1 (protein)
Unique Ligands	4HY, ARS, NA

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1RO6 \| pdb_00001ro6	Download File View File

Crystal structure of PDE4B2B complexed with Rolipram (R & S)

Xu, R.X., Rocque, W.J., Lambert, M.H., Vanderwall, D.E., Nolte, R.T.

(2004) J Mol Biology 337: 355-365

Released	2004-12-07
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	cAMP-specific 3',5'-cyclic phosphodiesterase 4B (protein)
Unique Ligands	ARS, MN, ROL, ZN

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1WN6 \| pdb_00001wn6	Download File View File

Crystal Structure of Blasticidin S Deaminase (BSD) Complexed with Tetrahedral Intermediate of Blasticidin S

Kumasaka, T., Yamamoto, M., Furuichi, M., Nakasako, M., Kimura, M., Yamaguchi, I., Ueki, T.

(2007) J Biological Chem 282: 37103-37111

Released	2005-10-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Aspergillus terreus
Macromolecule	Blasticidin-S deaminase (protein)
Unique Ligands	ARS, BST, ZN

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1Y0R \| pdb_00001y0r	Download File View File

Crystal structure of the tetrahedral aminopeptidase from P. horikoshii

Groll, M., Borissenko, L.

(2005) J Mol Biology 346: 1207-1219

Released	2005-03-01
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Pyrococcus horikoshii
Macromolecule	Frv operon protein FrvX (protein)
Unique Ligands	ARS, ZN

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2GBM \| pdb_00002gbm	Download File View File

Crystal Structure of the 35-36 8 Glycine Insertion Mutant of Ubiquitin

Ferraro, D.M., Ferraro, D.J., Ramaswamy, S., Robertson, A.D.

(2006) J Mol Biology 359: 390-402

Released	2006-05-16
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin (protein)
Unique Ligands	ARS

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2IA5 \| pdb_00002ia5	Download File View File

T4 polynucleotide kinase/phosphatase with bound sulfate and magnesium.

Zhu, H., Smith, P.C., Wang, L.K., Lima, C.D., Shuman, S.

(2007) Virology 366: 126-136

Released	2007-06-05
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Tequatrovirus T4
Macromolecule	Polynucleotide kinase (protein)
Unique Ligands	ARS, MG, SO4

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2J4Z \| pdb_00002j4z	Download File View File

Structure of Aurora-2 in complex with PHA-680626

Cameron, A.D., Izzo, G., Storici, P., Rusconi, L., Fancelli, D., Varasi, M., Berta, D., Bindi, S., Forte, B., Severino, D., Tonani, R., Vianello, P.

(2006) J Med Chem 49: 7247-7251

Released	2006-11-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	SERINE THREONINE-PROTEIN KINASE 6 (protein)
Unique Ligands	626, ARS

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2JGO \| pdb_00002jgo	Download File View File

Structure of the arsenated de novo designed peptide Coil Ser L9C

Touw, D.S., Nordman, C.E., Stuckey, J.A., Pecoraro, V.L.

(2007) Proc Natl Acad Sci U S A 104: 11969

Released	2007-07-10
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	synthetic construct
Macromolecule	COIL SER L9C (protein)
Unique Ligands	ARS, ZN

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2O6W \| pdb_00002o6w	Download File View File

Crystal Structure of a Pentapeptide Repeat Protein (Rfr23) from the cyanobacterium Cyanothece 51142

Kennedy, M.A., Buchko, G.W., Ni, S., Robinson, H., Pakrasi, H.B.

(2008) J Struct Biol 162: 184-192

Released	2007-12-18
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Cyanothece
Macromolecule	Repeat Five Residue (Rfr) protein or pentapeptide repeat protein (protein)
Unique Ligands	ARS

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2XQ4 \| pdb_00002xq4	Download File View File

Pentameric ligand gated ion channel GLIC in complex with tetramethylarsonium (TMAs)

Hilf, R.J.C., Bertozzi, C., Zimmermann, I., Reiter, A., Trauner, D., Dutzler, R.

(2010) Nat Struct Mol Biol 17: 1330

Released	2010-11-10
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Gloeobacter violaceus PCC 7421
Macromolecule	GLR4197 PROTEIN (protein)
Unique Ligands	ARS

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2XQ5 \| pdb_00002xq5	Download File View File

Pentameric ligand gated ion channel GLIC in complex with tetraethylarsonium (TEAs)

Hilf, R.J.C., Bertozzi, C., Zimmermann, I., Reiter, A., Trauner, D., Dutzler, R.

(2010) Nat Struct Mol Biol 17: 1330

Released	2010-11-10
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Gloeobacter violaceus PCC 7421
Macromolecule	GLR4197 PROTEIN (protein)
Unique Ligands	ARS

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2XQ9 \| pdb_00002xq9	Download File View File

Pentameric ligand gated ion channel GLIC mutant E221A in complex with tetraethylarsonium (TEAs)

Hilf, R.J.C., Bertozzi, C., Zimmermann, I., Reiter, A., Trauner, D., Dutzler, R.

(2010) Nat Struct Mol Biol 17: 1330

Released	2010-11-10
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Gloeobacter violaceus PCC 7421
Macromolecule	GLR4197 PROTEIN (protein)
Unique Ligands	ARS

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2Y0O \| pdb_00002y0o	Download File View File

The structure of a D-lyxose isomerase from the sigmaB regulon of Bacillus subtilis

Marles-Wright, J., Lewis, R.J.

(2011) Proteins 79: 2015

Released	2011-05-25
Method	X-RAY DIFFRACTION 1.229 Å
Organisms	Bacillus subtilis subsp. subtilis str. 168
Macromolecule	PROBABLE D-LYXOSE KETOL-ISOMERASE (protein)
Unique Ligands	ARS, SO4, ZN

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3CAO \| pdb_00003cao	Download File View File

OXIDISED STRUCTURE OF THE ACIDIC CYTOCHROME C3 FROM DESULFOVIBRIO AFRICANUS

Norager, S., Legrand, P., Pieulle, L., Hatchikian, C., Roth, M.

(1999) J Mol Biology 290: 881-902

Released	2000-07-23
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Desulfocurvibacter africanus
Macromolecule	CYTOCHROME C3 (protein)
Unique Ligands	ARS, HEM, ZN

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3CAR \| pdb_00003car	Download File View File

REDUCED STRUCTURE OF THE ACIDIC CYTOCHROME C3 FROM DESULFOVIBRIO AFRICANUS

Norager, S., Legrand, P., Pieulle, L., Hatchikian, C., Roth, M.

(1999) J Mol Biology 290: 881-902

Released	2000-07-23
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Desulfocurvibacter africanus
Macromolecule	CYTOCHROME C3 (protein)
Unique Ligands	ARS, HEM, ZN

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3CFS \| pdb_00003cfs	Download File View File

Structural basis of the interaction of RbAp46/RbAp48 with histone H4

Murzina, N.V., Pei, X.-Y., Pratap, J.V., Sparkes, M., Vicente-Garcia, J., Ben-Shahar, T.R., Verreault, A., Luisi, B.F., Laue, E.D.

(2008) Structure 16: 1077-1085

Released	2008-06-10
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Histone H4 (protein) Histone-binding protein RBBP7 (protein)
Unique Ligands	ARS

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3CFV \| pdb_00003cfv	Download File View File

Structural basis of the interaction of RbAp46/RbAp48 with histone H4

Pei, X.-Y., Murzina, N.V., Zhang, W., McLaughlin, S., Verreault, A., Luisi, B.F., Laue, E.D.

(2008) Structure 16: 1077-1085

Released	2008-06-10
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Histone H4 peptide (protein) Histone-binding protein RBBP7 (protein)
Unique Ligands	ARS

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3D3P \| pdb_00003d3p	Download File View File

Crystal structure of PDE4B catalytic domain in complex with a pyrazolopyridine inhibitor

Somers, D.O., Neu, M.

(2008) Bioorg Med Chem Lett 18: 4237-4241

Released	2009-05-19
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	cAMP-specific 3',5'-cyclic phosphodiesterase 4B (protein)
Unique Ligands	20A, ARS, MG, ZN

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3FRG \| pdb_00003frg	Download File View File

Catalytic Domain of Human Phosphodiesterase 4B2B in Complex with a Quinoline Inhibitor

Somers, D.O., Neu, M.

(2009) Bioorg Med Chem Lett 19: 1380-1385

Released	2010-01-12
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	cAMP-specific 3',5'-cyclic phosphodiesterase 4B (protein)
Unique Ligands	ARS, GOL, MG, SK4, ZN

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3GWT \| pdb_00003gwt	Download File View File

Catalytic domain of human phosphodiesterase 4B2B in complex with a quinoline inhibitor

Somers, D.O., Neu, M.

(2009) Bioorg Med Chem Lett 19: 5261-5265

Released	2010-04-07
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	cAMP-specific 3',5'-cyclic phosphodiesterase 4B (protein)
Unique Ligands	066, ARS, GOL, MG, ZN