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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "METAL BINDING PROTEIN"

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Search Summary

This query matches 2,783 Structures.

Refinements

Structure Determination Methodology

experimental (2,783)

Scientific Name of Source Organism

	Homo sapiens (687)
	Escherichia coli (132)
	Mus musculus (105)
	Bos taurus (102)
	Equus caballus (101)
	Escherichia coli K-12 (66)
	Rattus norvegicus (49)
	Streptomyces avidinii (42)
	Thermotoga maritima MSB8 (41)
	Pseudomonas aeruginosa (30)

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Taxonomy

	Eukaryota (1,389)
	Bacteria (1,246)
	Archaea (108)
	Eukaryota (eukaryotes) (42)
	other sequences (24)
	Duplodnaviria (12)
	Riboviria (10)
	Monodnaviria (4)
	Riboviria (RNA viruses and viroids) (4)
	Viruses incertae sedis (2)

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Experimental Method

	X-RAY DIFFRACTION (2,234)
	SOLUTION NMR (447)
	ELECTRON MICROSCOPY (96)
	ELECTRON CRYSTALLOGRAPHY (3)
	NEUTRON DIFFRACTION (2)
	SOLID-STATE NMR (2)
	SOLUTION SCATTERING (1)

Polymer Entity Type

	Protein (2,783)
	DNA (16)
	RNA (5)

Refinement Resolution (Å)

	< 0.5 (1)
	0.5 - 1.0 (10)
	1.0 - 1.5 (322)
	1.5 - 2.0 (920)
	2.0 - 2.5 (648)
	2.5 - 3.0 (312)
	3.0 - 3.5 (102)
	3.5 - 4.0 (15)
	4.0 - 4.5 (3)
	> 4.5 (2)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (25)
	2000 - 2004 (179)
	2005 - 2009 (530)
	2010 - 2014 (509)
	2015 - 2019 (604)
	2020 - 2024 (882)
	2025 - 2029 (53)

Enzyme Classification Name

	Oxidoreductases (405)
	Lyases (167)
	Hydrolases (174)
	Transferases (120)
	Isomerases (37)
	Translocases (5)
	Ligases (4)

Membrane Protein Annotation

	OPM (15)
	MemProtMD (7)
	PDBTM (7)
	mpstruc (7)

Symmetry Type

	Asymmetric (1,541)
	Cyclic (793)
	Octahedral (300)
	Dihedral (222)
	Tetrahedral (40)
	Helical (1)

SCOP Classification

	All alpha proteins (643)
	All beta proteins (257)
	Artifacts (249)
	Alpha and beta proteins (a/b) (216)
	Alpha and beta proteins (a+b) (172)
	Small proteins (136)
	Multi-domain proteins (alpha and beta) (5)
	Membrane and cell surface proteins and peptides (4)
	Coiled coil proteins (2)
	Designed proteins (2)

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1 to 25 of 2,783 Structures

Page 1 of 112

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1B0L \| pdb_00001b0l	Download File View File

RECOMBINANT HUMAN DIFERRIC LACTOFERRIN

Baker, E.N., Jameson, G.B., Sun, X.

(1999) Acta Crystallogr D Biol Crystallogr 55: 403-407

Released	1999-11-18
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (LACTOFERRIN) (protein)
Unique Ligands	CO3, FE

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1B1B \| pdb_00001b1b	Download File View File

IRON DEPENDENT REGULATOR

Pohl, E., Holmes, R.K., Hol, W.G.

(1999) J Mol Biology 285: 1145-1156

Released	1999-12-03
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	PROTEIN (IRON DEPENDENT REGULATOR) (protein)
Unique Ligands	SO4, ZN

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1B1G \| pdb_00001b1g	Download File View File

SOLVATED REFINEMENT OF CA-LOADED CALBINDIN D9K

Kordel, J., Pearlman, D.A., Chazin, W.J.

(1997) J Biomol NMR 10: 231-243

Released	1998-11-25
Method	SOLUTION NMR
Organisms	Bos taurus
Macromolecule	PROTEIN (CALBINDIN D9K) (protein)
Unique Ligands	CA

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1B1X \| pdb_00001b1x	Download File View File

STRUCTURE OF DIFERRIC MARE LACTOFERRIN AT 2.62A RESOLUTION

Sharma, A.K., Srinivasan, A., Singh, T.P.

(1999) J Mol Biology 289: 303-317

Released	1999-06-24
Method	X-RAY DIFFRACTION 2.62 Å
Organisms	Equus caballus
Macromolecule	LACTOFERRIN (protein)
Unique Ligands	CO3, FE

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1B4C \| pdb_00001b4c	Download File View File

SOLUTION STRUCTURE OF RAT APO-S100B USING DIPOLAR COUPLINGS

Weber, D.J., Drohat, A.C., Tjandra, N., Baldisseri, D.M.

(1999) Protein Sci 8: 800-809

Released	1998-12-30
Method	SOLUTION NMR
Organisms	Rattus norvegicus
Macromolecule	PROTEIN (S-100 PROTEIN, BETA CHAIN) (protein)

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1B7U \| pdb_00001b7u	Download File View File

Structure of Mare Apolactoferrin: the N and C Lobes are in the Closed Form

Sharma, A.K., Singh, T.P.

(1999) Acta Crystallogr D Biol Crystallogr 55: 1152-1157

Released	1999-02-02
Method	X-RAY DIFFRACTION 3.8 Å
Organisms	Equus caballus
Macromolecule	Lactotransferrin (protein)

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1BQ8 \| pdb_00001bq8	Download File View File

Rubredoxin (Methionine Mutant) from Pyrococcus Furiosus

Bau, R., Rees, D.C., Kurtz, D.M., Scott, R.A., Huang, H., Adams, M.W.W., Eidsness, M.K.

(1998) J Biol Inorg Chem 3: 484-493

Released	1998-08-26
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Pyrococcus furiosus
Macromolecule	PROTEIN (RUBREDOXIN) (protein)
Unique Ligands	FE

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1BQ9 \| pdb_00001bq9	Download File View File

Rubredoxin (Formyl Methionine Mutant) from Pyrococcus Furiosus

Bau, R., Rees, D.C., Kurtz, D.M., Scott, R.A., Huang, H., Adams, M.W.W., Eidsness, M.K.

(1998) J Biol Inorg Chem 3: 484-493

Released	1998-08-26
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Pyrococcus furiosus
Macromolecule	PROTEIN (RUBREDOXIN) (protein)
Unique Ligands	FE

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1BSW \| pdb_00001bsw	Download File View File

ACUTOLYSIN A FROM SNAKE VENOM OF AGKISTRODON ACUTUS AT PH 7.5

Gong, W., Zhu, X., Liu, S., Teng, M., Niu, L.

(1998) J Mol Biology 283: 657-668

Released	1999-08-26
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Deinagkistrodon acutus
Macromolecule	PROTEIN (ACUTOLYSIN A) (protein)
Unique Ligands	CA, ZN

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1BY5 \| pdb_00001by5	Download File View File

FHUA FROM E. COLI, WITH ITS LIGAND FERRICHROME

Locher, K.P., Rees, B., Koebnik, R., Mitschler, A., Moulinier, L., Rosenbusch, J.P., Moras, D.

(1998) Cell 95: 771-778

Released	1999-01-13
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli Ustilago sphaerogena
Macromolecule	FERRIC HYDROXAMATE UPTAKE PROTEIN (protein) FERRICHROME (protein)
Unique Ligands	FE, OES

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1C7V \| pdb_00001c7v	Download File View File

NMR SOLUTION STRUCTURE OF THE CALCIUM-BOUND C-TERMINAL DOMAIN (W81-S161) OF CALCIUM VECTOR PROTEIN FROM AMPHIOXUS

Theret, I., Baladi, S., Cox, J.A., Sakamoto, H., Craescu, C.T.

(2000) Biochemistry 39: 7920-7926

Released	2000-04-12
Method	SOLUTION NMR
Organisms	Branchiostoma lanceolatum
Macromolecule	CALCIUM VECTOR PROTEIN (protein)

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1C7W \| pdb_00001c7w	Download File View File

NMR SOLUTION STRUCTURE OF THE CALCIUM-BOUND C-TERMINAL DOMAIN (W81-S161) OF CALCIUM VECTOR PROTEIN FROM AMPHIOXUS

Theret, I., Baladi, S., Cox, J.A., Sakamoto, H., Craescu, C.T.

(2000) Biochemistry 39: 7920-7926

Released	2000-04-12
Method	SOLUTION NMR
Organisms	Branchiostoma lanceolatum
Macromolecule	CALCIUM VECTOR PROTEIN (protein)

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1CTL \| pdb_00001ctl	Download File View File

STRUCTURE OF THE CARBOXY-TERMINAL LIM DOMAIN FROM THE CYSTEINE RICH PROTEIN CRP

Perez-Alvarado, G.C., Miles, C., Michelsen, J.W., Louis, H.A., Winge, D.R., Beckerle, M.C., Summers, M.F.

(1994) Nat Struct Biol 1: 388-398

Released	1995-06-03
Method	SOLUTION NMR
Organisms	Gallus gallus
Macromolecule	AVIAN CYSTEINE RICH PROTEIN (protein)
Unique Ligands	ZN

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1D9V \| pdb_00001d9v	Download File View File

HAEMOPHILUS INFLUENZAE FERRIC-BINDING PROTEIN APO FORM

McRee, D.E., Bruns, C.M., Williams, P.A.

(2001) Biochemistry 40: 15631-15637

Released	1999-11-17
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Haemophilus influenzae
Macromolecule	PROTEIN (iron-utilization periplasmic protein) (protein)
Unique Ligands	PO4

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1D9Y \| pdb_00001d9y	Download File View File

NEISSERIA GONORRHOEAE FERRIC BINDING PROTEIN

McRee, D.E., Bruns, C.M., Williams, P.A., Mietzner, T.A., Nunn, R.

To be published

Released	1999-11-17
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Neisseria gonorrhoeae
Macromolecule	PROTEIN (PERIPLASMIC IRON-BINDING PROTEIN) (protein)
Unique Ligands	FE, PO4