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233,249 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: PubMed ID = 17869267

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Homo sapiens (11)
	Bos taurus (4)
	Lama glama (1)
	Mus musculus (1)
	unidentified (1)

Taxonomy

	Eukaryota (11)
	unclassified sequences (1)

Experimental Method

	X-RAY DIFFRACTION (6)
	ELECTRON MICROSCOPY (4)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (1)
	2.0 - 2.5 (4)
	3.5 - 4.0 (3)
	4.0 - 4.5 (1)

Release Date

	2000 - 2004 (1)
	2015 - 2019 (6)
	2020 - 2024 (4)

Enzyme Classification Name

Hydrolases (4)

Symmetry Type

	Asymmetric (11)
	Cyclic (1)

SCOP Classification

	Alpha and beta proteins (a+b) (5)
	Artifacts (5)
	All beta proteins (2)

AllSelected

1 to 11 of 11 Structures

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1MJD \| pdb_00001mjd	Download File View File

Structure of N-terminal domain of human doublecortin

Kim, M.H., Cierpicki, T., Derewenda, U., Krowarsch, D., Feng, Y., Devedjiev, Y., Dauter, Z., Walsh, C.A., Otlewski, J., Bushweller, J.H., Derewenda, Z.S.

(2003) Nat Struct Biol 10: 324-333

Released	2003-04-29
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	DOUBLECORTIN (protein)

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5IKC \| pdb_00005ikc	Download File View File

X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN in complex with FAB

Ruf, A., Stihle, M., Benz, J., Thoma, R., Rudolph, M.G.

(2016) J Biological Chem 291: 16292-16306

Released	2016-05-18
Method	X-RAY DIFFRACTION 2.06 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Ighg protein (protein) MAb 6H10 light chain (protein) Neuronal migration protein doublecortin (protein)
Unique Ligands	CL

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5IN7 \| pdb_00005in7	Download File View File

X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN

Ruf, A., Benz, J., Burger, D., D'Arcy, B., Debulpaep, M., Di Lello, P., Fry, D., Huber, W., Kremer, T., Laeremans, T., Matile, H., Ross, A., Rudolph, M.G., Rufer, A.C., Sharma, A., Steinmetz, M.O., Steyaert, J., Schoch, G., Stihle, M., Thoma, R.

(2016) J Biological Chem 291: 16292-16306

Released	2016-03-23
Method	X-RAY DIFFRACTION 2.48 Å
Organisms	Homo sapiens
Macromolecule	Neuronal migration protein doublecortin (protein)

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5IO9 \| pdb_00005io9	Download File View File

X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN

(2016) J Biological Chem 291: 16292-16306

Released	2016-03-23
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Homo sapiens
Macromolecule	Neuronal migration protein doublecortin (protein)

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5IOI \| pdb_00005ioi	Download File View File

X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN

(2016) J Biological Chem 291: 16292-16306

Released	2016-03-23
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Neuronal migration protein doublecortin (protein)

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5IP4 \| pdb_00005ip4	Download File View File

X-RAY STRUCTURE OF THE C-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN

(2016) J Biological Chem 291: 16292-16306

Released	2016-05-18
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Homo sapiens Lama glama
Macromolecule	Neuronal migration protein doublecortin (protein) XA4551 NANOBODY AGAINST C-DCX (protein)

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6FNZ \| pdb_00006fnz	Download File View File

Crystal Structure of domain-swapped C-terminal domain of human doublecortin

Stihle, M., Benz, J., Rudolph, M.G.

(2018) Acta Crystallogr D Struct Biol 74: 450-462

Released	2018-04-04
Method	X-RAY DIFFRACTION 2.23 Å
Organisms	Homo sapiens unidentified
Macromolecule	Neuronal migration protein doublecortin (protein) possible peptide (protein)

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6REV \| pdb_00006rev	Download File View File

Cryo-EM structure of the N-terminal DC repeat (NDC) of human doublecortin (DCX) bound to 13-protofilament GDP-microtubule

Manka, S.W.

(2020) EMBO Rep 21: e51534-e51534

Released	2020-05-13
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Bos taurus Homo sapiens
Macromolecule	Neuronal migration protein doublecortin (protein) Tubulin alpha-1B chain (protein) Tubulin beta-2B chain (protein)
Unique Ligands	GDP, GTP, MG

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6RF2 \| pdb_00006rf2	Download File View File

Cryo-EM structure of the C-terminal DC repeat (CDC) of human doublecortin (DCX) bound to 13-protofilament GDP.Pi-microtubule

Manka, S.W.

(2020) EMBO Rep 21: e51534-e51534

Released	2020-05-13
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Bos taurus Homo sapiens
Macromolecule	Neuronal migration protein doublecortin (protein) Tubulin alpha-1B chain (protein) Tubulin beta-2B chain (protein)
Unique Ligands	GDP, GTP, MG, PO4

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6RF8 \| pdb_00006rf8	Download File View File

Cryo-EM structure of the N-terminal DC repeat (NDC) of NDC-NDC chimera (human sequence) bound to 13-protofilament GDP-microtubule

Manka, S.W.

(2020) J Struct Biol 209: 107402-107402

Released	2020-04-15
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Bos taurus Homo sapiens
Macromolecule	Neuronal migration protein doublecortin (protein) Tubulin alpha-1B chain (protein) Tubulin beta-2B chain (protein)
Unique Ligands	GDP, GTP, MG

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6RFD \| pdb_00006rfd	Download File View File

Cryo-EM structure of the N-terminal DC repeat (NDC) of NDC-NDC chimera (human sequence) bound to 14-protofilament GDP-microtubule

Manka, S.W.

(2020) EMBO Rep 21: e51534-e51534

Released	2020-05-13
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Bos taurus Homo sapiens
Macromolecule	Neuronal migration protein doublecortin (protein) Tubulin alpha-1B chain (protein) Tubulin beta-2B chain (protein)
Unique Ligands	GDP, GTP, MG

1 to 11 of 11 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1MJD | pdb_00001mjd

Structure of N-terminal domain of human doublecortin

5IKC | pdb_00005ikc

X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN in complex with FAB

5IN7 | pdb_00005in7

X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN

5IO9 | pdb_00005io9

X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN

5IOI | pdb_00005ioi

X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN

5IP4 | pdb_00005ip4

X-RAY STRUCTURE OF THE C-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN

6FNZ | pdb_00006fnz

Crystal Structure of domain-swapped C-terminal domain of human doublecortin

6REV | pdb_00006rev

Cryo-EM structure of the N-terminal DC repeat (NDC) of human doublecortin (DCX) bound to 13-protofilament GDP-microtubule

6RF2 | pdb_00006rf2

Cryo-EM structure of the C-terminal DC repeat (CDC) of human doublecortin (DCX) bound to 13-protofilament GDP.Pi-microtubule

6RF8 | pdb_00006rf8

Cryo-EM structure of the N-terminal DC repeat (NDC) of NDC-NDC chimera (human sequence) bound to 13-protofilament GDP-microtubule

6RFD | pdb_00006rfd

Cryo-EM structure of the N-terminal DC repeat (NDC) of NDC-NDC chimera (human sequence) bound to 14-protofilament GDP-microtubule

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1MJD | pdb_00001mjd

5IKC | pdb_00005ikc

5IN7 | pdb_00005in7

5IO9 | pdb_00005io9

5IOI | pdb_00005ioi

5IP4 | pdb_00005ip4

6FNZ | pdb_00006fnz

6REV | pdb_00006rev

6RF2 | pdb_00006rf2

6RF8 | pdb_00006rf8

6RFD | pdb_00006rfd